Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_J04
         (930 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   3.0  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    23   3.0  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   3.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   3.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.9  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   5.2  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 734 HNHQEQTHQPHGETQSNVRH 793
           HNH +  H    + Q+N +H
Sbjct: 427 HNHNQARHSSKSDNQNNNQH 446


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 521 HSNKRPPHRLNRLRRTANTSSKP 589
           ++N  PP R  RLRR A   ++P
Sbjct: 19  NTNLDPPTRPTRLRREAKPEAEP 41


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 521 HSNKRPPHRLNRLRRTANTSSKP 589
           ++N  PP R  RLRR A   ++P
Sbjct: 20  NTNLDPPTRPTRLRREAEPEAEP 42


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 18/88 (20%), Positives = 33/88 (37%)
 Frame = +1

Query: 592 IPQYGLRNTVDLGQKSPADPSLVDADDRTHRSMSAPPDTPNQTKDECTQSPGADPSASRR 771
           I ++  R  +D+ Q +     L  AD    + +   P++ +        SP  +P   R 
Sbjct: 89  IIEFVYRGEIDVSQ-AELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRI 147

Query: 772 DPV*CPTHTDIRRRPRQASHQQVSGPRH 855
           +      H    +RPR     + +  RH
Sbjct: 148 NFTKLKRHHPRYKRPRTTFEPRATDSRH 175


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +2

Query: 710 LIKQKMSVHNHQEQTHQPHGETQSNVRHI 796
           L+  KM+    Q Q  Q H + Q   +H+
Sbjct: 406 LLAFKMTEQQQQMQAQQQHQQQQQQTQHV 434


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 521 HSNKRPPHRLNRLRRTANTSSKP 589
           ++N  PP R  RLRR A   ++P
Sbjct: 20  NTNLDPPTRPARLRREAKPEAEP 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,327
Number of Sequences: 438
Number of extensions: 4131
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)