Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I24
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 31 0.17
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 30 0.51
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 29 0.68
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 1.6
SPBC354.11c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 2.1
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 28 2.1
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 4.8
SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces po... 26 6.3
SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces pom... 26 6.3
SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyce... 26 8.4
SPBC646.15c |||Pex16 family protein|Schizosaccharomyces pombe|ch... 26 8.4
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 26 8.4
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 26 8.4
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 31.5 bits (68), Expect = 0.17
Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 1/153 (0%)
Frame = +1
Query: 304 SAKETTR-PAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPATY 480
S+ ETT P++ SL G + +L+ + D T+ + I +
Sbjct: 313 SSSETTNLPSSSSSLVTIGESSFPSSLLSLLTQSFSTVRSTSSSSTDQLTSASPISSSVI 372
Query: 481 SPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSNDVLSLKITQVPNDDDEVYTKAM 660
SP+V S + TN+G++ GD +++ +++ +T V + + T
Sbjct: 373 SPSVSSPTSSILTNSGSI--KSGDHQIVTTSFVQTTTHGSQVETLTYVTTLTETILTTTY 430
Query: 661 LGFELLHEKASTFDNHIRYISQYIMKKAGVKES 759
L + N I Y + + + +K S
Sbjct: 431 DSHTFLTTITPSPSNSISYTNNTFIPSSSIKSS 463
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 29.9 bits (64), Expect = 0.51
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 184 ETFIEQWMAFSLNYVNGASPNLENLDLFVRKEFSKRRTNASAKETTRPAAGKSLTVYGAK 363
E ++ + S + + PNL + F F + N AKE++ A S+T Y K
Sbjct: 197 EVCVDSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKK 256
Query: 364 A 366
A
Sbjct: 257 A 257
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 29.5 bits (63), Expect = 0.68
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 85 SW*LSNLNFFGINVEQDVLIKCVNLCEENN 174
SW L ++ F+G+N+ Q V++K + N
Sbjct: 343 SWFLLDIAFYGVNLNQSVILKAIGFSSGKN 372
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/77 (24%), Positives = 30/77 (38%)
Frame = +1
Query: 295 TNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPA 474
T++S T A S+ A S S + SS + ++ ++ V
Sbjct: 487 TSSSIFSTATEATDTSVQTSSAIYDSSSTSNIQSSSSVYASSTGALSSNSLSSSTSSVST 546
Query: 475 TYSPTVGSAKYASRTNA 525
+Y P S+ YAS T A
Sbjct: 547 SYIPNASSSVYASSTEA 563
>SPBC354.11c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 172
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2
Query: 221 FKLNAIHCSIKVSASILFSSHKFTHFIKTSCSTFMPKKFKLLSHQLF 81
FKLN++ CS SILF+S FI + F+ FK S F
Sbjct: 86 FKLNSLCCSFTCYPSILFASSLPIQFIALPPTVFL-LFFKFYSRLFF 131
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 478 YSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKAN 585
Y+P+V K A++ ++ YGDE + E+G N
Sbjct: 214 YAPSVLPQKEAAKKGYAQILWLYGDEDYITEVGTMN 249
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 319 TRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVG- 495
T P S ++ GAK + PP + + + + +++K+ ++ P T +P++
Sbjct: 239 TIPKGTPSTSIEGAKTSIPPSHAMQNPHNSFPASADRLQKNHPVQSSNFNPYTPAPSITV 298
Query: 496 SAKYASRT-NAGTVVHSYGD 552
Y T G S+GD
Sbjct: 299 PPNYIPNTAMMGPSYSSFGD 318
>SPBC29A10.09c |||CAF1 family ribonuclease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 133 DVLIKCVNLCEENN-IDAETFIEQWMAFSLNYVNGASPNLENLDLFVRK 276
D+ ++ C+E +DA I+ W++ L++ N+ + F+RK
Sbjct: 148 DLTSSILDACDEEILVDARNQIKNWLSSELSHSTSKYLNITTSNRFIRK 196
>SPBC947.05c |||ferric-chelate reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 589 SCSLYLILVVISHLHKNGPPCLRLFSTRTSLN 494
SC L+ + S KN P CL LFS+ +N
Sbjct: 118 SCGLFFVSYFFSL--KNNPFCLMLFSSHEKMN 147
>SPCC2H8.02 |||inorganic phosphate transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +1
Query: 85 SW*LSNLNFFGINVEQDVLIK 147
SW L ++ F+GIN+ Q V+++
Sbjct: 364 SWFLLDIAFYGINLNQSVILQ 384
>SPBC646.15c |||Pex16 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 517 TNAGTVVHSYGDEKLLQELGKANSSNDVLSLKITQVPND-DDEVYTKAM 660
+N+G+ V +K++ L NSS D L + ++ + DE++TK +
Sbjct: 165 SNSGSAVVLKNSKKVVPRLNTVNSSLDFLQNRTPRLSSILPDEIFTKRL 213
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 373 PPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHSY 546
P D +++ + VTP+ + ++ +QN+ YS S+ Y + +A + SY
Sbjct: 124 PDDRALMNYHSTVTPQTSERRRETRRHQNNQHSQQYSSQERSSSYNNFEDASSPQSSY 181
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1283
Score = 25.8 bits (54), Expect = 8.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 641 SSSSLGTCVIFKLSTSFELFALPNSCSNFSSP*EWTT 531
S SL I LS ++ L++ + N S+P WT+
Sbjct: 1176 SKKSLSELKILGLSQTYLLYSYNSKVDNISNPGSWTS 1212
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,687,838
Number of Sequences: 5004
Number of extensions: 80575
Number of successful extensions: 244
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 243
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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