Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I24
(897 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0056 - 11936264-11939677 31 0.94
04_04_0765 - 27910189-27912393,27912521-27912598 31 0.94
10_08_0480 - 18203186-18203284,18203821-18204006,18204590-182047... 31 1.6
05_06_0101 - 25581800-25581943,25582030-25582095,25582268-255823... 30 2.2
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 29 3.8
04_03_0021 - 9548600-9548794,9548851-9549006 29 3.8
01_06_1477 + 37645143-37647425 29 3.8
04_04_0667 + 27097741-27098085,27098203-27098547 29 5.0
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 29 5.0
06_01_0997 - 7752634-7753128,7753280-7753708,7754403-7755196,775... 29 6.6
01_06_1506 + 37830468-37830600,37830703-37830920,37832078-378325... 29 6.6
03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248 28 8.8
03_02_0064 + 5353417-5353419,5353440-5353536,5353631-5353699,535... 28 8.8
02_01_0013 - 85332-85637 28 8.8
>09_03_0056 - 11936264-11939677
Length = 1137
Score = 31.5 bits (68), Expect = 0.94
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Frame = +1
Query: 139 LIKCVNLC----EENNIDAETFIEQWMAFSLNYVNGASPNL----ENLDLFVRKEF 282
L +C + C + + DAET ++ W+A L NG+ P + E D VR+ F
Sbjct: 568 LKRCFSFCSMYPKSHEFDAETLVDSWVAVGLVVSNGSVPAVDIGHEYFDQLVRRSF 623
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 31.5 bits (68), Expect = 0.94
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +1
Query: 295 TNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNQNDIVPA 474
T S PAA + A A PDS V + V +P V + DIV A
Sbjct: 389 TTCSPAAAGMPAAAVAAAGSTAPAVVAPDSPVAAVAVFSSPTAVAASSSPAASPVDIVAA 448
Query: 475 TYSPTVGSAKYAS 513
+ SP A + S
Sbjct: 449 SSSPAAAVAAFGS 461
>10_08_0480 -
18203186-18203284,18203821-18204006,18204590-18204736,
18204829-18204912,18206290-18206532
Length = 252
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 481 SPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSNDVLSLKITQVPNDDDEVYTKAM 660
SP ++Y AG G ++E+GK S ++ + ++P+D +A+
Sbjct: 63 SPAAAVSRYNRMARAGADEVQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEAL 122
Query: 661 LGFELLHEKASTF-DNH 708
+ LLH K ST +NH
Sbjct: 123 I---LLHSKVSTLAENH 136
>05_06_0101 -
25581800-25581943,25582030-25582095,25582268-25582390,
25582635-25582722,25582823-25582920,25583088-25583147,
25583228-25583288,25583374-25583505,25583957-25584167,
25584515-25584648,25584907-25584989,25585077-25585142,
25585552-25585607,25585701-25585800,25586313-25586421,
25586499-25586653,25586767-25586937,25587129-25587212,
25587261-25587345,25587431-25587477,25587912-25588124
Length = 761
Score = 30.3 bits (65), Expect = 2.2
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = +1
Query: 334 GKSLTVYGAKATSPPDSEVLSSYVAVTPKRVK-----IEKDATT--NQNDIVPATYSPTV 492
GK L K + P EVLS +V T K V+ E D T +Q+D+ +
Sbjct: 279 GKLLNGNEPKIVNGP--EVLSKFVGETEKNVRDLFADAENDQKTRGDQSDLHVIIFDEID 336
Query: 493 GSAKYASRTNAGTVVHSYGDEKLLQELGKANSSNDVLSLKIT 618
K T GT VH +LL ++ + N+VL + +T
Sbjct: 337 AICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMT 378
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +1
Query: 430 IEKDATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSNDVLSL 609
+E+D ND+ P TY P V ++ A R++ + S + +SS+ L
Sbjct: 489 VEEDVDIGGNDLPPLTYPPAVFESETAERSSKHSTSSSSSSDSESSSSDSDSSSSSGSDL 548
Query: 610 KITQVPN 630
+ P+
Sbjct: 549 DVNVPPS 555
>04_03_0021 - 9548600-9548794,9548851-9549006
Length = 116
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 415 PKRVKIEK--DATTNQNDIVPATYSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANS 588
P + +I K + N+++IVP T K T GT+V Y KL+ ++ +S
Sbjct: 17 PPKSRIPKLGGSEVNESNIVPITLDKLTPEQKKDLETRQGTIVQRY-KMKLVADVAGTSS 75
Query: 589 SND 597
S D
Sbjct: 76 SKD 78
>01_06_1477 + 37645143-37647425
Length = 760
Score = 29.5 bits (63), Expect = 3.8
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +1
Query: 193 IEQWMAFSLNYVNGASPNLENLDLFVRKEFSKRRTNASAKETTRPAAGKSLTVYGAKATS 372
+ QW +++N +SP+L N F+ F +R A+A ET + +T GA A S
Sbjct: 629 VTQWSTYAVNCSGASSPDL-NYPSFI-AYFDRRSAAAAAAET--KTFVRVVTNVGAGAAS 684
Query: 373 ---PPDSEVLSSYVAVTPKRVKIEKDATTNQNDIV 468
+ V+VTP R+ K T + +V
Sbjct: 685 YRAKVKGNLGGLAVSVTPSRLVFGKKGETQKYTLV 719
>04_04_0667 + 27097741-27098085,27098203-27098547
Length = 229
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +1
Query: 283 SKRRTNASAKETTRPAAGKSLTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNQND 462
S N S E K G PP+S VL TP V +E D +Q D
Sbjct: 141 SSSSCNGSGSEEVDDDDDKRNAAAGCLDLEPPESCVLGGATCATPADVSVESDQCDDQLD 200
>02_01_0014 -
87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 94 LSNLNFFGINVEQDVLIKCVNLCEENNIDAETFIEQWMAFSLNYVN 231
LS L+FF V++ L N+C + DA F+ + + N +N
Sbjct: 222 LSYLDFFSTGVQRVALSTAANICRKLPSDASEFVMEAVPLLTNLLN 267
>06_01_0997 -
7752634-7753128,7753280-7753708,7754403-7755196,
7755247-7755574
Length = 681
Score = 28.7 bits (61), Expect = 6.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 343 LTVYGAKATSPPDSEVLSSYVAVTPKRVKIEKDATTNQ 456
+T G + PP+S L SY + K +I KDA++N+
Sbjct: 550 VTSIGEQMQLPPESLKLISYTNLCTKFTQIAKDASSNE 587
>01_06_1506 +
37830468-37830600,37830703-37830920,37832078-37832529,
37832595-37833402,37834986-37835073,37835196-37835299,
37835402-37835483,37836670-37836923
Length = 712
Score = 28.7 bits (61), Expect = 6.6
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -2
Query: 338 LPAAGRVVSLADALVRRLENSFLTNKSKFSKFGEAPFT*FKLNAIHCS-IKVSASILFSS 162
+P VSLA L+ F KSK + FGE + A CS + S+ L S
Sbjct: 220 IPCIAMAVSLAIFLIGTRSYRFYPPKSKGNPFGEVAEWIRRWIASSCSKLPDSSDELLPS 279
Query: 161 HKFTHFIKTSCSTFMPKK 108
+ S S F+PK+
Sbjct: 280 SSSEGDVSNSSSEFVPKE 297
>03_06_0419 - 33789625-33789843,33790884-33791185,33791279-33792248
Length = 496
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Frame = +1
Query: 286 KRRTNASAKETTRPAAGK--SLTVYGAKATSPP---DSEVLSSYVAVTPKRVKIEKDATT 450
+RR N +A T R G+ T A + PP + +S A+T +R
Sbjct: 168 RRRRNTAAAATARRGRGRPRGATASSAHSAPPPPQQQQQPTTSAPAITAQRNDDVNQEDD 227
Query: 451 NQNDIVPATYSPTVGSAKYASRTNAGTVVHSYGD 552
NQ+ A + V + + T+A +V +GD
Sbjct: 228 NQSSKNSAEEAVVVDGGEPPAATSALAIVPRHGD 261
>03_02_0064 +
5353417-5353419,5353440-5353536,5353631-5353699,
5353783-5353875,5353991-5354114,5354733-5354802,
5354876-5354917,5355072-5355200,5355288-5355395,
5357747-5357881,5358064-5358099
Length = 301
Score = 28.3 bits (60), Expect = 8.8
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +1
Query: 457 NDIVPATYSPTVGSAKYASRTNAGTVVHSYGDEKLLQELGKANSSNDVLSLKITQV--PN 630
+D+ P Y P K + A ++ + L E+G NS + VL+LK+ V P
Sbjct: 163 DDVTPEDYEPPF--FKCCANNEA---INIWNKNPLKMEVGNVNSKHLVLALKVKSVLDPC 217
Query: 631 DDDEV 645
DD+ V
Sbjct: 218 DDNNV 222
>02_01_0013 - 85332-85637
Length = 101
Score = 28.3 bits (60), Expect = 8.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 241 PNLENLDLFVRKEFSKRRTNASAKETTRPAAGKSLTVYGAKATSPPDS 384
PN+ + L E+ + +ASA ++T A K+ T +++T PP S
Sbjct: 50 PNVNSKILSKVIEYCNKHVHASADDSTSSADLKNWTPTSSRSTRPPSS 97
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,365,533
Number of Sequences: 37544
Number of extensions: 489559
Number of successful extensions: 1256
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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