Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I23
(1014 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 25 0.093
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 25 0.094
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.57
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.57
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.57
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 32 0.57
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.7
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 1.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.7
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 1.7
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 25 3.6
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 26 5.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 25 5.9
AL117195-26|CAB55037.1| 153|Caenorhabditis elegans Hypothetical... 24 8.9
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 9.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 9.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 9.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 9.4
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.4 bits (53), Expect(3) = 0.093
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 476 RTTXPPXSXXXKKEXXPXPXPPPPP 402
R+ P ++ P P PPPPP
Sbjct: 749 RSASTPQPIQQQQSSIPPPPPPPPP 773
Score = 23.8 bits (49), Expect(3) = 0.093
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = -2
Query: 416 PPPPPXXPIH--*PXKNXPHXPXNLAH 342
PPPPP PI P P P L H
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGGLMH 821
Score = 22.6 bits (46), Expect(3) = 0.093
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 422 PXPPPPPXXP 393
P PPPPP P
Sbjct: 765 PPPPPPPPPP 774
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.4 bits (53), Expect(3) = 0.094
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = -2
Query: 476 RTTXPPXSXXXKKEXXPXPXPPPPP 402
R+ P ++ P P PPPPP
Sbjct: 749 RSASTPQPIQQQQSSIPPPPPPPPP 773
Score = 23.8 bits (49), Expect(3) = 0.094
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = -2
Query: 416 PPPPPXXPIH--*PXKNXPHXPXNLAH 342
PPPPP PI P P P L H
Sbjct: 795 PPPPPLPPISSGAPPPPPPPPPGGLMH 821
Score = 22.6 bits (46), Expect(3) = 0.094
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 422 PXPPPPPXXP 393
P PPPPP P
Sbjct: 765 PPPPPPPPPP 774
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.57
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 536 PXFSGKPYXPPWGG-DTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXP 393
P G P PP GG + G PP P P PPPP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -2
Query: 536 PXFSGKPYXPPWGG-DTVGGNRTTXPPXSXXXKKEXXPXPXPPPPP 402
P G P PP GG + G PP P P PPPPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGC-----PPPPPPPPP 777
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXPI 390
P +G P PP G + G PP P P PPP PI
Sbjct: 707 PPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.57
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 536 PXFSGKPYXPPWGG-DTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXP 393
P G P PP GG + G PP P P PPPP P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -2
Query: 536 PXFSGKPYXPPWGG-DTVGGNRTTXPPXSXXXKKEXXPXPXPPPPP 402
P G P PP GG + G PP P P PPPPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGC-----PPPPPPPPP 777
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXPI 390
P +G P PP G + G PP P P PPP PI
Sbjct: 707 PPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 754
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.57
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 536 PXFSGKPYXPPWGG-DTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXP 393
P G P PP GG + G PP P P PPPP P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -2
Query: 536 PXFSGKPYXPPWGG-DTVGGNRTTXPPXSXXXKKEXXPXPXPPPPP 402
P G P PP GG + G PP P P PPPPP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGC-----PPPPPPPPP 360
Score = 28.3 bits (60), Expect = 9.2
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXPI 390
P +G P PP G + G PP P P PPP PI
Sbjct: 290 PPITGGPPPPP-GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPI 337
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 32.3 bits (70), Expect = 0.57
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 488 VGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXPIH 387
+G +T PP ++ P P PPPPP PIH
Sbjct: 289 IGKTLSTQPP-----RRTPQPHPKPPPPPPPPIH 317
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = -3
Query: 1012 PPPXGEXXVXPGWDPKPXLPGKRAPPSXLXGGVXAKQPXXWGRKDPXPEXENL 854
PPP G + P P P G PP + GG+ P +G P P L
Sbjct: 75 PPPPGPGGIPP---PPPMFAGGIPPPPPMMGGI-PPPPPMFGAPPPPPPPSGL 123
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = -3
Query: 982 PGWDPKPXLPGKRAPPSXLXGGVXAKQPXXWGRKDPXPEXENLTXGXANXXGXTLP 815
PG D P LPG R PP A QP G + E LT G G P
Sbjct: 178 PGTDATPGLPGPRGPPGPPG---EAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGP 230
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPHXP 357
P S P PP G + G+ + PP + PPPP P P P P
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPHXP 357
P S P PP G + G+ + PP + PPPP P P P P
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPHXP 357
P S P PP G + G+ + PP + PPPP P P P P
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = -3
Query: 982 PGWDPKPXLPGKRAPPSXLXGGVXAKQPXXWGRKDPXPEXENLTXGXANXXGXTLP 815
PG D P LPG R PP A QP G + E LT G G P
Sbjct: 178 PGTDATPGLPGPRGPPGPPG---EAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGP 230
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.3 bits (65), Expect = 2.3
Identities = 28/101 (27%), Positives = 33/101 (32%), Gaps = 2/101 (1%)
Frame = -2
Query: 653 GNXXPGGAEPMEKPQQRGLFXGSLPXLKALXSXVLSXVNPXFSGKPYXPPWGG--DTVGG 480
G PG +P E PQ G S P V+P P PP G D
Sbjct: 174 GPPSPGPVDPSEDPQPSG---SSSP----------GPVDPSDEPSPSGPPSPGPVDPSED 220
Query: 479 NRTTXPPXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPHXP 357
+ + PP P P PP P P P + P P
Sbjct: 221 PKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPP 261
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 24.6 bits (51), Expect(2) = 3.6
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 440 KEXXPXPXPPPPP 402
+E P P PPPPP
Sbjct: 472 EEAAPPPPPPPPP 484
Score = 23.4 bits (48), Expect(2) = 3.6
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 416 PPPPPXXPIH*PXKNXPHXP 357
PPPPP P + P + P P
Sbjct: 477 PPPPPPPPENEPEEFPPPPP 496
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.1 bits (62), Expect = 5.3
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 509 PPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPP 402
P G+ G R PP S P PPPPP
Sbjct: 505 PRNNGNNNGNGRPMKPPSSSGSGSNRRSGPPPPPPP 540
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXP 393
P G P PP G GG PP P PPPPP P
Sbjct: 328 PGMGGMPPPPPPGMRYPGG----MPPPPPPRYPSAGPGMYPPPPPSRP 371
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -2
Query: 536 PXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPPXXP 393
P G P PP G GG PP P PPPPP P
Sbjct: 338 PGMGGMPPPPPPGMRYPGG----MPPPPPPRYPSAGPGMYPPPPPSRP 381
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 25.8 bits (54), Expect(2) = 7.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 464 PPXSXXXKKEXXPXPXPPPPP 402
PP ++ P P PPPPP
Sbjct: 73 PPPLISILQQAPPPPPPPPPP 93
Score = 24.6 bits (51), Expect(2) = 5.8
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -2
Query: 464 PPXSXXXKKEXXPXPXPPPPP 402
PP + P P PPPPP
Sbjct: 72 PPPPLISILQQAPPPPPPPPP 92
Score = 22.6 bits (46), Expect(2) = 5.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 422 PXPPPPPXXP 393
P PPPPP P
Sbjct: 84 PPPPPPPPPP 93
Score = 21.0 bits (42), Expect(2) = 7.5
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 422 PXPPPPPXXPIH*P 381
P PPPPP + P
Sbjct: 85 PPPPPPPPPTLKAP 98
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 25.0 bits (52), Expect(2) = 5.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 428 PXPXPPPPPXXP 393
P P PPPPP P
Sbjct: 141 PPPPPPPPPPAP 152
Score = 22.2 bits (45), Expect(2) = 5.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = -2
Query: 464 PPXSXXXKKEXXPXPXPPPPP 402
PP + P PPPPP
Sbjct: 128 PPRTCCPPPTPAAPPPPPPPP 148
>AL117195-26|CAB55037.1| 153|Caenorhabditis elegans Hypothetical
protein Y57A10A.32 protein.
Length = 153
Score = 24.2 bits (50), Expect(2) = 8.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 437 EXXPXPXPPPPP 402
E P P PPPPP
Sbjct: 77 EEPPAPPPPPPP 88
Score = 22.6 bits (46), Expect(2) = 8.9
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 422 PXPPPPPXXP 393
P PPPPP P
Sbjct: 80 PAPPPPPPPP 89
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 461 PXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPH 363
P S + P P P PPP P P +N H
Sbjct: 1910 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCH 1942
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 461 PXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPH 363
P S + P P P PPP P P +N H
Sbjct: 2494 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCH 2526
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 461 PXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPH 363
P S + P P P PPP P P +N H
Sbjct: 1910 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCH 1942
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 461 PXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPH 363
P S + P P P PPP P P +N H
Sbjct: 2494 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCH 2526
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -2
Query: 464 PPXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPHXPXNL-AHDRNA 330
PP + + P P P P P P P P L +HDR A
Sbjct: 160 PPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPRLNSHDRRA 205
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 461 PXSXXXKKEXXPXPXPPPPPXXPIH*PXKNXPH 363
P S + P P P PPP P P +N H
Sbjct: 2494 PDSSQRGRVCEPPPPPSPPPRHPCQDPERNDCH 2526
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 23.8 bits (49), Expect(2) = 9.4
Identities = 13/47 (27%), Positives = 14/47 (29%)
Frame = -2
Query: 542 VNPXFSGKPYXPPWGGDTVGGNRTTXPPXSXXXKKEXXPXPXPPPPP 402
+N P PP G PP P PPPPP
Sbjct: 496 INGHAPNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPP 542
Score = 22.6 bits (46), Expect(2) = 9.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 422 PXPPPPPXXP 393
P PPPPP P
Sbjct: 576 PPPPPPPPPP 585
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,449,606
Number of Sequences: 27780
Number of extensions: 259247
Number of successful extensions: 1496
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2667870690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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