Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I19
(961 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.020
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.026
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.030
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 0.45
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 30 0.56
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 0.79
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.2
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.9
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.9
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 5.2
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.020
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -3
Query: 479 KXPPPPPPXXKKKXXXGEXLPXPPPXXPKKXPTXPXPP 366
K PPPPPP +P PPP P P PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -2
Query: 663 PXPXXXXPKXPPPXRXXSRXXPPXPPXXP 577
P P P PPP + PP PP P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 26.2 bits (55), Expect = 6.9
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 473 PPPPPPXXKKKXXXGEXLPXPPPXXP 396
PPPPPP G P PPP P
Sbjct: 761 PPPPPPPP---GVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 9.1
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = -3
Query: 662 PXXXXPXPKXPPPKEXXPAXRPXXPPXPPXXXXGXXGGAP 543
P P P PPP P PP P G AP
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.026
Identities = 29/115 (25%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Frame = -3
Query: 674 KKKPPXXXXPXPKXPPPKEXXPAXRPXXPPXP--PXXXXGXXGGAPKNXXXXXXPRXXXV 501
++ P P PPP + P PP P P K R
Sbjct: 243 ERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAA 302
Query: 500 XXXXTX*KXPPPPPPXXKK---KXXXGEXL------PXPPPXXPKKXPTXPXPPQ 363
K PPPPPP ++ K G P PPP + P PPQ
Sbjct: 303 ALAANK-KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQ 356
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = -3
Query: 470 PPPPPXXKKKXXXGEXLP-----XPPPXXPKKXP-TXPXPP 366
PPPPP + LP PPP P+ P T PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect(2) = 0.030
Identities = 20/70 (28%), Positives = 24/70 (34%)
Frame = -3
Query: 785 GXFWGGGGPXXKKXXKKKPPXXGXPPEGGXPGXXXFXKKKPPXXXXPXPKXPPPKEXXPA 606
G + GG P + K PP P + +PP P P PPP PA
Sbjct: 102 GGLFAGGMPKLRHIGKSSAS--AAPPSAPAPPTPQ-SELRPPTSAPPRPSIPPPS---PA 155
Query: 605 XRPXXPPXPP 576
P P P
Sbjct: 156 SAPPIPSKAP 165
Score = 23.4 bits (48), Expect(2) = 0.030
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = -3
Query: 473 PPPPPPXXKKKXXXGEXLPXPPPXXPKKXPTXPXPPQKXXP 351
PPP P K P P P P P PP P
Sbjct: 172 PPPAQPAAPVKSPPSA--PSLPSAVPPMPPKVPPPPLSQAP 210
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 6.9
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 470 PPPPPXXKKKXXXGEXLPXPPPXXPKK 390
PPPPP + P PPP KK
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 25.0 bits (52), Expect(2) = 0.45
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 641 PKXPPPKEXXPAXRPXXPPXP 579
P PPP P +P PP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = -3
Query: 641 PKXPPPKEXXPAXRPXXPPXPP 576
P PPP P P P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 23.4 bits (48), Expect(2) = 0.45
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 473 PPPPPPXXKKK 441
PPPPPP KK
Sbjct: 25 PPPPPPGYVKK 35
Score = 21.4 bits (43), Expect(2) = 2.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 473 PPPPPPXXKKK 441
PPPPP KK+
Sbjct: 26 PPPPPGYVKKR 36
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 29.9 bits (64), Expect = 0.56
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 853 PPPXXXXXXXGPPPRAXXGGKXXAFFG 773
PPP PPP A GG FFG
Sbjct: 33 PPPAPSRVQQAPPPTAVQGGSSPGFFG 59
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 24.6 bits (51), Expect(2) = 0.79
Identities = 12/41 (29%), Positives = 13/41 (31%)
Frame = -3
Query: 473 PPPPPPXXKKKXXXGEXLPXPPPXXPKKXPTXPXPPQKXXP 351
PPPPPP + LP P PP P
Sbjct: 239 PPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATP 279
Score = 23.0 bits (47), Expect(2) = 0.79
Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Frame = -3
Query: 641 PKXPP---PKEXXPAXRPXXPPXP 579
P+ PP PK+ P P PP P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.3
Identities = 25/85 (29%), Positives = 25/85 (29%)
Frame = +2
Query: 407 GGXXGGXPPXXFFFFXXXGGGGVFFXXFXXXKRGXXXXXXXXXXFWGPPPXXPXXXXGXX 586
GG GG PP F G GG G F G P G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGE-----GHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 587 GGXGGXXRXXFLXGGGXLGXXSXGW 661
GG GG GGG G GW
Sbjct: 249 GGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 27.1 bits (57), Expect = 3.9
Identities = 29/99 (29%), Positives = 29/99 (29%), Gaps = 2/99 (2%)
Frame = +1
Query: 376 GXVGXFLGXXGGGXGRXSPXFXFFFXXGGGGGGXFXXVXXXQTXXXRXXXXXXXFLGAPP 555
G G G GGG G P F GG GG F G P
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGG------------EGHHHGGHGGFGGGPG 231
Query: 556 XXPXXXXGGXGGXXGRXAGXXSXGG--GXFGXGXXXXGG 666
G GG G G GG G FG G GG
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 3.9
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 577 GGXGGXXGRXAGXXSXGGGXFGXGXXXXGGFFXXXXXXPGXPPSGGXPXXGGF 735
GG GG G G GG G G G G P G GGF
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 577 GGXGGXXGRXAGXXSXGGGXFGXGXXXXGGFFXXXXXXPGXPPSGGXP 720
GG GG G G GG G GGF G P G P
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -1
Query: 472 PPPPXPXKKKKXXXGXXSLXPPLXXPKXPQPXXXPPKKXXXXPXISVG 329
PP P P S PP+ P P PP + P SVG
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 665 PPXXXXPXPKXPPPKEXXPAXRPXXPPXPP 576
PP P P PP P P P PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 26.6 bits (56), Expect = 5.2
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -1
Query: 667 SPPXXGXXTQXTPPXKKXXPPXAPXXPXXP 578
+PP T PP PP AP P P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 26.6 bits (56), Expect = 5.2
Identities = 13/38 (34%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = -3
Query: 473 PPP---PPPXXKKKXXXGEXLPXPPPXXPKKXPTXPXP 369
PPP PPP G PPP P+ P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.2 bits (55), Expect = 6.9
Identities = 19/66 (28%), Positives = 21/66 (31%)
Frame = -3
Query: 776 WGGGGPXXKKXXKKKPPXXGXPPEGGXPGXXXFXKKKPPXXXXPXPKXPPPKEXXPAXRP 597
+GG P P PP+ P PP P P PP PA P
Sbjct: 1678 FGGMAPAHPVSTPPVRPQSAAPPQMSAP-----TPPPPPMSVPPPPSAPP----MPAGPP 1728
Query: 596 XXPPXP 579
PP P
Sbjct: 1729 SAPPPP 1734
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +1
Query: 553 PXXPXXXXGGXGGXXGRXAGXXSXGGGXFGXGXXXXGGFFXXXXXXPGXPPSGGXPXXGG 732
P P G G GR GG G G GGF G GG GG
Sbjct: 124 PKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG--SRGG 181
Query: 733 F 735
F
Sbjct: 182 F 182
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 5.2
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = -3
Query: 731 PPXXGXPPEGGXPGXXXFXKKKPPXXXXPXPKXPPPKEXXPAXRPXXPPXPPXXXXGXXG 552
PP PP G PG +PP P PP P P P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPP-MVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP 558
Query: 551 GAP 543
GAP
Sbjct: 559 GAP 561
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,797,927
Number of Sequences: 5004
Number of extensions: 25033
Number of successful extensions: 182
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 491307756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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