Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_I15
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0207 - 17927753-17927983,17928077-17928178,17928273-179285...   117   1e-26
04_03_0267 + 13660546-13660953,13661937-13662143,13662379-13662522    101   1e-21
01_06_1167 - 35062766-35062870,35063165-35063228,35063647-350637...    73   4e-13
02_01_0462 + 3332464-3332470,3333606-3335806                           29   5.1  
02_01_0460 + 3323236-3323950,3325087-3326025,3326104-3326723           28   8.9  

>06_03_0207 -
           17927753-17927983,17928077-17928178,17928273-17928502,
           17929257-17929343,17931263-17931389,17931485-17931628,
           17931920-17931985,17932136-17932254,17932437-17932551,
           17932626-17932732,17932969-17932983,17933810-17933900,
           17934528-17934671,17934750-17934980,17935093-17935248,
           17935330-17935483,17935973-17936117,17936241-17936355
          Length = 792

 Score =  117 bits (282), Expect = 1e-26
 Identities = 56/92 (60%), Positives = 69/92 (75%)
 Frame = +2

Query: 491 ADIAVDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRER 670
           A++ V V KLD R+G I +  KHPDADSLYVE+ID GEE PRTVVSGLV  +P++EM+ R
Sbjct: 625 AEVDVTVAKLDIRVGLIRKAQKHPDADSLYVEEIDVGEEAPRTVVSGLVKFIPLEEMQNR 684

Query: 671 IVMVLCNLKPVKMRXVTSEAMVMCASSAEKLK 766
            V VLCNLKPV MR + S AMV+ AS+ +  K
Sbjct: 685 KVCVLCNLKPVAMRGIKSHAMVLAASNEDHTK 716


>04_03_0267 + 13660546-13660953,13661937-13662143,13662379-13662522
          Length = 252

 Score =  101 bits (241), Expect = 1e-21
 Identities = 43/79 (54%), Positives = 62/79 (78%)
 Frame = +2

Query: 518 LDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERIVMVLCNLK 697
           LD R+G++V+  +HP+AD+LYVE++D GEE PRT+ SGLVN++PID++++  V+VL NLK
Sbjct: 88  LDIRVGRVVKAWRHPEADTLYVEEVDVGEEQPRTICSGLVNYLPIDQLQDSNVIVLANLK 147

Query: 698 PVKMRXVTSEAMVMCASSA 754
           P  MR + S  M+M AS A
Sbjct: 148 PRNMRGIKSNGMLMAASDA 166


>01_06_1167 -
           35062766-35062870,35063165-35063228,35063647-35063738,
           35064137-35064205,35064322-35064412,35064509-35064732,
           35065064-35065180,35065583-35065651,35066172-35066237,
           35066335-35066505,35066581-35066661,35067620-35067700
          Length = 409

 Score = 72.5 bits (170), Expect = 4e-13
 Identities = 37/88 (42%), Positives = 55/88 (62%)
 Frame = +2

Query: 494 DIAVDVRKLDFRIGKIVEISKHPDADSLYVEKIDCGEENPRTVVSGLVNHVPIDEMRERI 673
           D   +V  L+ ++G I +  KHP ADSL VE+ID G+ N   VVSGL      +E+  R 
Sbjct: 244 DSECNVSILNIQVGLIRKAWKHPSADSLLVEEIDLGDGNVHQVVSGLAKFFSPEELVNRH 303

Query: 674 VMVLCNLKPVKMRXVTSEAMVMCASSAE 757
           V+++ N+KP K+R V S  +V+CAS+ +
Sbjct: 304 VVLITNVKPGKLRDVMSAGLVLCASNQD 331


>02_01_0462 + 3332464-3332470,3333606-3335806
          Length = 735

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 260 NNTLSAKVNAAKAELIGLEISHGKRQYAIPGKTDLLETTKIV 385
           N TL A  +AA   L  +++SH     AIP    +L T  ++
Sbjct: 66  NGTLDALYSAAFENLTTIDLSHNNLDGAIPANISMLHTLTVL 107


>02_01_0460 + 3323236-3323950,3325087-3326025,3326104-3326723
          Length = 757

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 260 NNTLSAKVNAAKAELIGLEISHGKRQYAIPGKTDLLETTKIV 385
           N TL A  +AA   L  +++SH     AIP    +L T  I+
Sbjct: 77  NGTLDALYSAAFENLTTIDLSHNNLDGAIPANICMLRTLTIL 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,183,269
Number of Sequences: 37544
Number of extensions: 286743
Number of successful extensions: 571
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)