Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I12
(972 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.058
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.31
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 0.94
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 5.0
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 35.5 bits (78), Expect = 0.058
Identities = 22/60 (36%), Positives = 22/60 (36%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXGIXXXVGG 250
G GC GG C G G G C G G G G G G G GG G GG
Sbjct: 130 GGGCGGGGGGGCGGGGG-GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGG 188
Score = 33.9 bits (74), Expect = 0.18
Identities = 23/62 (37%), Positives = 23/62 (37%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXGIXXXVGG 250
G GC GG C G G G C G G G GCG G G GG G G
Sbjct: 138 GGGCGGGGGGGCGGGG--GGCGGGGGGCGGGGG---GCGGGGGGGCGGGGGGGCGGGCGR 192
Query: 249 XK 244
K
Sbjct: 193 KK 194
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/60 (35%), Positives = 21/60 (35%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXGIXXXVGG 250
G GC GG G G G C G A GCG G G GG G GG
Sbjct: 29 GGGCGGGCGGG-GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGG 87
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.31
Identities = 25/78 (32%), Positives = 25/78 (32%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXGIXXXVGG 250
G GC GG C G G G C G G G G G G G GG G GG
Sbjct: 94 GGGCGG--GGGCGGGG--GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
Query: 249 XKVAXXFAAXGPXTGKXG 196
G G G
Sbjct: 150 GSSGGCGGGGGGGCGGGG 167
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/60 (38%), Positives = 24/60 (40%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXGIXXXVGG 250
G GC GG C G G G C G G G + GCG G G GG G GG
Sbjct: 114 GGGCGGG-GGGCGGGG--GGCGGGGGGGCGGGSS-GGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXG 271
G GC GG C G G G C G G G + GCG G G GG G
Sbjct: 121 GGGCGGG-GGGCGGGGG-GGCGGGSSGGCGGGSS-GGCGGGGGGGCGGGGGGG 170
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 33.1 bits (72), Expect = 0.31
Identities = 25/78 (32%), Positives = 25/78 (32%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXGIXXXVGG 250
G GC GG C G G G C G G G G G G G GG G GG
Sbjct: 94 GGGCGG--GGGCGGGG--GGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGG 149
Query: 249 XKVAXXFAAXGPXTGKXG 196
G G G
Sbjct: 150 GSSGGCGGGGGGGCGGGG 167
Score = 33.1 bits (72), Expect = 0.31
Identities = 23/60 (38%), Positives = 24/60 (40%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXGIXXXVGG 250
G GC GG C G G G C G G G + GCG G G GG G GG
Sbjct: 114 GGGCGGG-GGGCGGGG--GGCGGGGGGGCGGGSS-GGCGGGSSGGCGGGGGGGCGGGGGG 169
Score = 31.9 bits (69), Expect = 0.71
Identities = 21/53 (39%), Positives = 22/53 (41%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGGWXXG 271
G GC GG C G G G C G G G + GCG G G GG G
Sbjct: 121 GGGCGGG-GGGCGGGGG-GGCGGGSSGGCGGGSS-GGCGGGGGGGCGGGGGGG 170
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -3
Query: 676 GG*XGXGGVAGXGGGXGXAXVXGGDVXLGG 587
GG G GG+ G GGG G GG + GG
Sbjct: 185 GGGFGGGGMGGYGGGMGGGGYGGGGMGGGG 214
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/79 (30%), Positives = 24/79 (30%)
Frame = -3
Query: 823 WGXGGPGAXGXLXPXEGRRASAXXXXXXXXXGGRXXXXXXXXXPXXRXIGG*XGXGGVAG 644
WG GGPG G G GG GG G GG G
Sbjct: 48 WGGGGPG-WGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGG 106
Query: 643 XGGGXGXAXVXGGDVXLGG 587
GGG G GG GG
Sbjct: 107 GGGGRGGGGGGGGGRGGGG 125
>Z81059-5|CAJ15164.1| 176|Caenorhabditis elegans Hypothetical
protein F11F1.8 protein.
Length = 176
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 679 IGG*XGXGGVAGXGGGXGXAXVXGG-DVXLGG 587
+GG G GG+ G GG G V GG D LGG
Sbjct: 45 LGGILGNGGLGGILGGNGLGGVLGGEDGGLGG 76
>Z81059-2|CAB02926.1| 240|Caenorhabditis elegans Hypothetical
protein F11F1.4 protein.
Length = 240
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 679 IGG*XGXGGVAGXGGGXGXAXVXGG-DVXLGG 587
+GG G GG+ G GG G V GG D LGG
Sbjct: 39 LGGILGNGGLGGILGGNGLGGVLGGEDGGLGG 70
>Z81059-1|CAB02925.1| 249|Caenorhabditis elegans Hypothetical
protein F11F1.2 protein.
Length = 249
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 679 IGG*XGXGGVAGXGGGXGXAXVXGG-DVXLGG 587
+GG G GG+ G GG G V GG D LGG
Sbjct: 45 LGGILGNGGLGGILGGNGLGGVLGGEDGGLGG 76
>Z81059-3|CAB02927.1| 246|Caenorhabditis elegans Hypothetical
protein F11F1.5 protein.
Length = 246
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 679 IGG*XGXGGVAGXGGGXGXAXVXGG-DVXLGG 587
+GG G GG+ G GG G + GG D LGG
Sbjct: 45 LGGILGNGGLGGILGGNGLGGILGGEDGGLGG 76
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = -1
Query: 429 GVGCASRWGGXCRGXGXLGXCYXGVLGXXRGXARLXGCGXGIXGXAAGG 283
G GC GG C G G G G G G G G G G A+GG
Sbjct: 92 GGGCGGG-GGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGGGGGYASGG 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,861,265
Number of Sequences: 27780
Number of extensions: 66306
Number of successful extensions: 394
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2521399358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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