Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I11
(932 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 36 0.011
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 31 0.31
SPBC9B6.11c |||CCR4/nocturin family endoribonuclease|Schizosacch... 29 0.71
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 1.2
SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|... 28 1.6
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 28 2.2
SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 28 2.2
SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces p... 27 2.9
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 3.8
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 27 5.0
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 5.0
SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15 |Sc... 27 5.0
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 5.0
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 26 6.6
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 6.6
SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|c... 26 6.6
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.6
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 26 6.6
SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr 1|... 26 8.7
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 26 8.7
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 35.5 bits (78), Expect = 0.011
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Frame = +1
Query: 265 EDEW---NYYKGEGEREEKNASEEPEEQPRSETPCQDNS----GWESSSVDMNSSPLNPD 423
+ EW N + G + P++ + T D+ E + +D LNP
Sbjct: 1283 QPEWVSFNSFSGTVRPSNSEKLQRPQQLSVAATSAVDSKTASISEEQAKIDKQKVALNPS 1342
Query: 424 APVFVPGSAATDVLLAESPRKPL 492
AP FVP S +D + +E+ K L
Sbjct: 1343 APEFVPDSTPSDAVASETDNKNL 1365
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 30.7 bits (66), Expect = 0.31
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 238 NVAESGEDSEDEWNYYKGEGEREEKNASEEPEEQPRSETPCQDNSGWESS 387
+V E +D EDE +GE E EE+ E+PE ET + N E S
Sbjct: 261 SVLEEDDDDEDEDEELEGEKEEEEEE-KEKPEISNYDETEGKVNFSLEDS 309
>SPBC9B6.11c |||CCR4/nocturin family
endoribonuclease|Schizosaccharomyces pombe|chr
2|||Manual
Length = 502
Score = 29.5 bits (63), Expect = 0.71
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 265 EDEWNYYKGEGEREEKNASEEPEEQPRSE--TPCQDNS 372
E NY GE E EEKNAS + E + CQ +S
Sbjct: 328 ERSMNYVFGESELEEKNASTKTENDSNEDDKEECQSSS 365
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/77 (23%), Positives = 33/77 (42%)
Frame = +1
Query: 160 PVKIIICTVRSPIHVEEGHVDGALVDNVAESGEDSEDEWNYYKGEGEREEKNASEEPEEQ 339
P+ + +V+ + GH +VD V+ E+ + KGEG+R + +
Sbjct: 72 PIFVPTSSVQLNVSKNNGHKASDIVDAVSSKDEELR---KHAKGEGKRSKNRKRSSKHSE 128
Query: 340 PRSETPCQDNSGWESSS 390
++ NS E+SS
Sbjct: 129 KQAVDLKSSNSSQETSS 145
>SPAC6F6.03c |||ribosome export GTPase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +1
Query: 247 ESGEDSEDEWNYYKGEGEREEKNASEEPEEQPRSET 354
+ GE++E+EW+ +G+ +E +++ E SE+
Sbjct: 489 QDGEEAEEEWHGISDDGKADESESTKPVAEGSASES 524
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +1
Query: 220 DGALVDNVAESGEDSEDEWNYYKGEGEREEKNASEEPEEQPRSETPCQDNSGWESSSVD 396
+ +V + +G+ +ED + GEG + N +EE ++ + +N E S+ D
Sbjct: 3 ENEVVGSPTTNGDKNEDGYPAENGEGTNVDDNNNEEEKDGIPLDNDNDENDSSEESATD 61
>SPAC1A6.11 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 27.9 bits (59), Expect = 2.2
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Frame = -3
Query: 876 SCSWISFLFLIFRKAHXFFQSKWIXFCM--CLKYMNITEISCI--FLYSFKVLYEFHVL- 712
S S+ F+ + H S+ I C+ C ++I C+ FLY K Y H+L
Sbjct: 27 SNSFFPHSFMFVKSLH-LMTSQHIFKCLSSCNYALSILHNICLASFLYLSKCYYHTHILT 85
Query: 711 ----DFVRFNAH--IESKAQT 667
DF + +AH I+SKA T
Sbjct: 86 SVRLDFCKSHAHTYIKSKAST 106
>SPCC1235.08c |pdh1||DUF1751 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 226
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -3
Query: 873 CSWISFLFLIFRKAHXF--FQS-KWIXFCMCLKYMNITEISCIFLY 745
C +L +F H F FQS W FC+ + I+E+ +F++
Sbjct: 164 CPLSKYLIYLFLSIHLFYVFQSFPWTYFCLAVSGTCISELYVLFVH 209
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 232 VDNVAESGEDSEDEWNYYKGEGEREEKNASEEPEEQPRSETPCQDNSGWESSSVDMNSS 408
++ ES DS E + E E E ++ E EE+ +T + ESSS +SS
Sbjct: 156 IEEKKESSSDSSSESS--SSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSS 212
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 810 WIXFCMCLKYMNITEISCIF-LYSFKVLYEFHVLDF 706
W+ CL Y+N + IF ++ F +Y H L+F
Sbjct: 261 WLALSKCLNYVNTVIVYPIFVIFVFVWIYMRHYLNF 296
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 463 LLAESPRKPLPMDDIDLPDV 522
LL E+P PLP DD +L D+
Sbjct: 744 LLLENPNYPLPKDDHELEDM 763
>SPBC146.01 |med15|SPBP35G2.15|mediator complex subunit Med15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1063
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 319 SEEPEEQPRSETPCQDNSGWESSSVDMNSSPLN---PDAPVFVPGSA 450
+++ + QP+S+ Q + ++ SV N P+N P+A VPG A
Sbjct: 732 NQQQQPQPQSQQQQQASQFPQAPSVSSNVRPINGSIPNAQPSVPGQA 778
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +1
Query: 208 EGHVDGALVDNVAESGEDSEDEWNYYKGEGEREEKNAS---EEPEEQPRS 348
EG DG ++ S E+ E+E + + E E NAS E+PEE+P +
Sbjct: 211 EGDGDGEGENDGKGSEEEEEEEIDIEEEEEESALANASAAEEKPEEKPET 260
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Frame = +1
Query: 271 EWNYYKGEGEREEKNASEEPEEQPRSETPCQDNSGWESSSVDMNSSPLNPDAPVFVPGSA 450
+W + ++E KNA+ ++P S+ S +S+ V + + V V G +
Sbjct: 58 QWTEENLKTQKELKNAAISTRQKPTSKKSASSTSKHDSTGVKTSGKRSRESSTVTVDGDS 117
Query: 451 --ATDVLLAESPRKPLPMDDIDLPDVTQFRTEAVVRP 555
+ + P+P + T + E +P
Sbjct: 118 HELPSRIKTQKSESPIP-QQVKRDGTTDAKNEETTKP 153
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 6.6
Identities = 20/78 (25%), Positives = 31/78 (39%)
Frame = +1
Query: 199 HVEEGHVDGALVDNVAESGEDSEDEWNYYKGEGEREEKNASEEPEEQPRSETPCQDNSGW 378
HV + DG D+ + E +DE + ER+E EE E+ + D
Sbjct: 214 HVYDDTNDGT--DDDINNNEYKDDESSSGSESYERDEDVDEEEEEDDDENNDEGDDEDEN 271
Query: 379 ESSSVDMNSSPLNPDAPV 432
E+ + + NP A V
Sbjct: 272 ENDELRSENGSPNPSAAV 289
>SPAC105.03c |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 708
Score = 26.2 bits (55), Expect = 6.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 664 DSLGFGFNVGIEPDKVKDVELIQDFERIQKDTTDFCNIHVFQTHAEANP 810
DSL + + + P DV+LI+ + ++ T F N+H+ + ANP
Sbjct: 223 DSLSYAYI--LNPTSDSDVDLIRQYFIPKEGTYTFSNMHI--RYVSANP 267
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 536 VRNCVTSGRSISSIGNGLRGDSASNTSVA-ALPGTNTGA 423
++ T+ RS +G G+ G+ SNT + A P TGA
Sbjct: 41 LKKATTNDRSAPVVGGGVVGERKSNTPKSFAAPPVPTGA 79
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 292 EGEREEKNASEEPEEQPRSETPCQDNSGWESSSVDMNSSPLNPDAPVFVP 441
E +R ++N+ ++ P + DNS + NSSP+ P +F P
Sbjct: 194 ESDRFKRNSQSLSQQSPLLDVHSPDNSNHRTMLNINNSSPIKP-KKIFKP 242
>SPAC637.09 |||ribonuclease H70 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 370 SGWESSSVDMNSSPLNP 420
SGW +S+ D +S P+NP
Sbjct: 250 SGWVASAGDFHSPPINP 266
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 25.8 bits (54), Expect = 8.7
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 211 GHVDGALVDNVAESGEDSEDEWNYYKGEGEREEKNASEE-PEEQPRSETPCQDNSGWE-S 384
G G +V+ E+ EDSED+ Y + E E ++ +++ E + DN
Sbjct: 1843 GIFQGDIVNENDENYEDSEDDGVYEEMEFEDDQSGSADSVVSEDDADDVMYSDNDDMNIE 1902
Query: 385 SSVDMNSSPLNPDAPVFVPGSAATDVL 465
VD + D F S+ DV+
Sbjct: 1903 FMVDEQDASSQNDDSSFDEASSHGDVI 1929
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,300,734
Number of Sequences: 5004
Number of extensions: 67360
Number of successful extensions: 305
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 473333082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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