Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_I09
         (903 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044...    29   3.8  
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029...    29   3.8  
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904...    29   6.7  
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492...    29   6.7  
05_05_0007 - 21465506-21466273                                         28   8.8  
02_05_1027 - 33602170-33602622,33602912-33603013                       28   8.8  

>01_05_0662 - 24103475-24103735,24103831-24104085,24104280-24104451,
            24104535-24104762,24104864-24104997,24105101-24105184,
            24105273-24105563,24105660-24105992,24106081-24106334,
            24106435-24106591,24106674-24106777,24106879-24107039,
            24107216-24107529,24107614-24107895,24107991-24108292,
            24108367-24108457,24108566-24108619,24108785-24108861,
            24108963-24109207,24109322-24109410,24110811-24111254
          Length = 1443

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -1

Query: 390  VADSGKVK-VFIVEK*LYVTEHASKRSKHFVHMFGEISVEIHWI 262
            V +SG V+ V +VE+ ++  E A+     F + FG++++E+ +I
Sbjct: 1237 VQNSGSVQPVVVVERTVFYRERAAGMYSAFPYAFGQVAIELPYI 1280


>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
            13504409-13504497,13504612-13504696,13504852-13505011,
            13505096-13505160,13505296-13505349,13505437-13505527,
            13505685-13505986,13506084-13506365,13506451-13506764,
            13506920-13507080,13507202-13507305,13507379-13507535,
            13507652-13507896,13507995-13508327,13508428-13508751,
            13508816-13508899,13509001-13509169,13509610-13509731,
            13510538-13510792,13511115-13511252
          Length = 1377

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -1

Query: 444  FQIVISDVTVVGTFVGRQVADSGKVK-VFIVEK*LYVTEHASKRSKHFVHMFGEISVEIH 268
            +Q V     +V   +   + +SG V+ V +VE+ ++  E A+     F + FG++++E+ 
Sbjct: 1194 YQFVSFHAVLVNCILYIGIQNSGCVQPVVVVERTVFYRERAAGMYSGFPYAFGQVAIELP 1253

Query: 267  WI 262
            +I
Sbjct: 1254 YI 1255


>10_08_0628 +
           19389508-19389637,19389774-19389850,19390332-19390438,
           19390545-19390626,19390702-19390814,19391023-19391086,
           19391192-19391266,19391691-19391807,19392131-19392199,
           19392319-19392411,19392733-19392835,19393040-19393164,
           19393317-19393366,19393477-19393543,19393663-19393742,
           19394038-19394166,19394274-19394340,19394429-19394512
          Length = 543

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 240 ERDVRYHRSNGSPQRFHQTYARNVSIVWK 326
           E+ +R H+   S Q  HQTYA  +  VW+
Sbjct: 191 EKIIRNHKLRESGQGQHQTYALGIKEVWE 219


>05_07_0093 -
           27648656-27648736,27649034-27649147,27649229-27649288,
           27649464-27649687,27649799-27649886,27650326-27650532,
           27650566-27650784,27650903-27651001,27651439-27651504,
           27651654-27651737,27651829-27651888,27652041-27652325,
           27652789-27652836,27652988-27653034,27653442-27653556,
           27653958-27654032,27654227-27654298,27654944-27656124,
           27656613-27656757
          Length = 1089

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 625 TSVKKPDGTIETRRIVKNGNEVTEETVTSGPGDKHRQ 735
           ++ ++  G+ ET   ++ GN+  +ET  SGP D+  Q
Sbjct: 185 STAEENSGSTETGNTIETGNQDHQETKYSGPNDEAPQ 221


>05_05_0007 - 21465506-21466273
          Length = 255

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 184 RNPIWGSDDEDDGDELYSRNEMSAIIDPMDLHRDFTKHMHEMFRSFG 324
           R    G DD+DDG   +    ++   D  D + DF   M EM  + G
Sbjct: 135 RRAAGGGDDDDDGAASFGGG-VAVAFDSEDPYEDFRASMAEMLAAHG 180


>02_05_1027 - 33602170-33602622,33602912-33603013
          Length = 184

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 734 NPH-NGHHDHKLHLQWCHSEVFSVDFNNICXLL 829
           NPH N HHDH+      H  +  +D NN+C ++
Sbjct: 133 NPHQNSHHDHEQ-----HGVLKYLDLNNLCLVI 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,278,689
Number of Sequences: 37544
Number of extensions: 481818
Number of successful extensions: 1362
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)