Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I09
(903 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024205-3|AAF36045.1| 308|Caenorhabditis elegans Hypothetical ... 32 0.49
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 32 0.65
Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical p... 30 2.0
Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical p... 30 2.0
Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic s... 30 2.0
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 30 2.6
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 29 3.4
Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical p... 29 4.5
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 29 4.5
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 6.0
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 6.0
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 29 6.0
>AC024205-3|AAF36045.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.2 protein.
Length = 308
Score = 32.3 bits (70), Expect = 0.49
Identities = 22/68 (32%), Positives = 29/68 (42%)
Frame = +1
Query: 301 HEMFRSFGSMFGDVQSFFHDENFDFPGISDLPSDEGSNHGNIRDYYLKPGYDNHREALKQ 480
H F+ S D+ F N+ PG S+ P EG H N P N AL
Sbjct: 58 HNDFKYIRSKLDDLNIRFIGVNY--PGFSNTPEYEGQQHAN-------PERQNFSNALLD 108
Query: 481 DVDLDGKI 504
++ +DGKI
Sbjct: 109 ELKIDGKI 116
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.65
Identities = 25/87 (28%), Positives = 35/87 (40%)
Frame = +2
Query: 176 TIFETQSGVPTMKTTEMNYTLGTRCPLS*IQWISTEISPNICTKCFDRLEACSVTYSHFS 355
T+ T + T+ T+ T S ST I T + S T +
Sbjct: 285 TVTSTVTSTTTVPTSTSTVTTAMSTSTS-TPSTSTTIESTSTTFTSTASTSTSSTSTTQQ 343
Query: 356 TMKTLTFPESATCLPTKVPTTVTSEIT 436
+ T+T S+T L T +PTT T EIT
Sbjct: 344 SSSTITSSPSSTTLSTSIPTTTTPEIT 370
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.9 bits (69), Expect = 0.65
Identities = 25/87 (28%), Positives = 35/87 (40%)
Frame = +2
Query: 176 TIFETQSGVPTMKTTEMNYTLGTRCPLS*IQWISTEISPNICTKCFDRLEACSVTYSHFS 355
T+ T + T+ T+ T S ST I T + S T +
Sbjct: 285 TVTSTVTSTTTVPTSTSTVTTAMSTSTS-TPSTSTTIESTSTTFTSTASTSTSSTSTTQQ 343
Query: 356 TMKTLTFPESATCLPTKVPTTVTSEIT 436
+ T+T S+T L T +PTT T EIT
Sbjct: 344 SSSTITSSPSSTTLSTSIPTTTTPEIT 370
>Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical
protein T05C12.6c protein.
Length = 625
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 340 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 516
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 517 ISGLLKQKDN 546
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical
protein T05C12.6b protein.
Length = 666
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 340 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 516
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 517 ISGLLKQKDN 546
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>Z66500-9|CAA91307.1| 672|Caenorhabditis elegans Hypothetical
protein T05C12.6a protein.
Length = 672
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 340 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 516
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 517 ISGLLKQKDN 546
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 666
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 340 VQSFFHDENFDFPGISDLPSDEG-SNHGNIRDYYLKPGYDNHREALKQDVDLDGKISSNE 516
++ F++ ++ P +S + + EG + GN ++ + K GY + + L D+ + K+
Sbjct: 12 IKVFYYLDDETTPYVSVIEAREGVATLGNFKNSFTKRGYKYYAKELDPDIQREVKVELTT 71
Query: 517 ISGLLKQKDN 546
S L++ N
Sbjct: 72 DSDRLRKSQN 81
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical
protein C16A3.3 protein.
Length = 1743
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 330 HASKRSKHFVHMFGEISVEIHWIYDSGHLVP 238
HAS+ SK F +F E +EI + G +VP
Sbjct: 100 HASEVSKKFTELFNEEKIEIKNAFQLGQMVP 130
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 163 EPPRNDFRNPIWGSDDEDDGDE 228
EPP ND R S+DEDD DE
Sbjct: 517 EPPTNDERLVFSSSEDEDDDDE 538
>Z36753-13|CAA85331.1| 598|Caenorhabditis elegans Hypothetical
protein T09A5.2a protein.
Length = 598
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 272 ISTEISPNICTKCFDRLEACSVTYSHFSTMKTLTFPESAT 391
I E+SP I T C D C Y H + KT T T
Sbjct: 305 IFNEVSP-IITSCIDGYNVCIFAYGHTGSGKTYTMDGPVT 343
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 353 STMKTLTFPESATCLPTKVPTTVTSEITI*NPAMTIT 463
+T +T T P+S T T PTT TS T A T T
Sbjct: 201 TTTETTTTPQSTTTTTTVPPTTTTSTTTTTTIATTTT 237
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 29.1 bits (62), Expect = 4.5
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 232 YSRNEMSAIIDPMDLHRDFTKHMHEMFRSFGSMFGDVQSFFHDENFDFPGISDLPSDEGS 411
+ R + A+ +P+ F +H + M + VQ D + PGIS +P+ GS
Sbjct: 102 FQRGQSLALSNPIPTQNAFWQHNNSMATT------SVQ----DYDLMQPGISRIPTGTGS 151
Query: 412 NHGNIRDY-YLKPGYDNHREALKQDVD 489
R+Y LK YD E L Q ++
Sbjct: 152 GLNIAREYEQLKVEYDTMMEKLNQTMN 178
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 326 ACSVTYSHFSTMKTLTFPESATCLPTKVPTTVTSEITI*NPAMTITER 469
A + T +T +T T S T + T+ PTTVTS T+ + + T +
Sbjct: 515 ATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTK 562
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 326 ACSVTYSHFSTMKTLTFPESATCLPTKVPTTVTSEITI*NPAMTITER 469
A + T +T +T T S T + T+ PTTVTS T+ + + T +
Sbjct: 356 ATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTK 403
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 326 ACSVTYSHFSTMKTLTFPESATCLPTKVPTTVTSEITI*NPAMTITER 469
A + T +T +T T S T + T+ PTTVTS T+ + + T +
Sbjct: 396 ATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTTLPSTTASTTTK 443
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 28.7 bits (61), Expect = 6.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 409 SNHGNIRDYYLKPGY--DNHREALKQDVDLDGKISSNEISGLLKQKDNMQ 552
S + +I DY+L PG D+ E +Q+V+L IS G + QK N++
Sbjct: 256 STYKDISDYFLNPGQLSDSEFEGDQQEVELPQDISEGRGCG-VGQKSNVR 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,546,604
Number of Sequences: 27780
Number of extensions: 440207
Number of successful extensions: 1526
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1523
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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