Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_I07
(913 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0227 + 1933247-1933699 44 2e-04
03_02_0483 - 8804021-8804485 39 0.005
03_02_0478 + 8775892-8776377 39 0.005
03_02_0484 + 8805053-8805538 39 0.006
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 39 0.006
02_01_0222 + 1450233-1450766 38 0.008
01_01_0229 - 1943473-1943922 38 0.008
03_02_0485 - 8808139-8808618 38 0.011
01_01_0231 + 1951047-1951499 38 0.011
11_02_0041 - 7669692-7670312 33 0.31
02_02_0077 - 6586638-6587165 33 0.42
06_01_1017 - 7951985-7952425 31 1.3
05_07_0296 - 29061900-29061923,29062026-29062440,29062529-290625... 31 1.3
05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 31 1.3
03_05_0543 - 25404630-25405408,25405461-25405605 30 2.9
07_03_0132 - 14011468-14012124 29 6.8
11_05_0004 - 18269416-18269473,18270319-18270509,18271061-182720... 28 9.0
>01_01_0227 + 1933247-1933699
Length = 150
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/111 (27%), Positives = 49/111 (44%)
Frame = +2
Query: 281 WKQXALANXXVGSTITSNXDKFQVNLERSTLFARRXSQ*RTADGYVIVEGKHEERQDEHG 460
WK+ A+ D+ +V +E + + R D V+GK++ER
Sbjct: 44 WKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREED----VDGKNDERWHHVE 99
Query: 461 YISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 613
S +F RR+ LP D V + + +GVLTV P+ +A+PI+
Sbjct: 100 RSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKAIPIS 149
>03_02_0483 - 8804021-8804485
Length = 154
Score = 39.1 bits (87), Expect = 0.005
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 431 KHEERQDEHGYISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 601
+ EE+ D+ + R +F RR+ LPEN P+ +++ + +GVLTV P+ + ++
Sbjct: 91 EQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEPKKPDVKS 149
Query: 602 VPIT 613
+ IT
Sbjct: 150 IQIT 153
>03_02_0478 + 8775892-8776377
Length = 161
Score = 39.1 bits (87), Expect = 0.005
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Frame = +2
Query: 431 KHEERQDEHGYISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 601
+ EE+ D+ + R +F RR+ LP+N P+ +++ + +GVLTV P+ A + ++
Sbjct: 98 EQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASM-ENGVLTVTVPKEEAKKPDVKS 156
Query: 602 VPIT 613
+ I+
Sbjct: 157 IQIS 160
>03_02_0484 + 8805053-8805538
Length = 161
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 431 KHEERQDEHGYISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 601
+ EE+ D+ + R +F RR+ LPEN P+ +++ + +GVLTV P+ + ++
Sbjct: 98 EQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEPKKPDVKS 156
Query: 602 VPIT 613
+ +T
Sbjct: 157 IQVT 160
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 437 EERQDEHGYISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 607
E++ D+ + R QF RR+ LPEN D V++ L +GVLTV P+ +A+
Sbjct: 89 EDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPKAEVKKPEVKAIE 147
Query: 608 IT 613
I+
Sbjct: 148 IS 149
>02_01_0222 + 1450233-1450766
Length = 177
Score = 38.3 bits (85), Expect = 0.008
Identities = 29/111 (26%), Positives = 49/111 (44%)
Frame = +2
Query: 281 WKQXALANXXVGSTITSNXDKFQVNLERSTLFARRXSQ*RTADGYVIVEGKHEERQDEHG 460
WK+ A A+ + ++ +V +E + + R A+ +G+ R +
Sbjct: 74 WKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEE----KGERWHRVERS- 128
Query: 461 YISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 613
S +F R LP N N D V + L + GVLT+ P+ + R +PIT
Sbjct: 129 --SERFVRTVRLPPNANTDGVHAALDN-GVLTITIPKDNDRKPHARIIPIT 176
>01_01_0229 - 1943473-1943922
Length = 149
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 437 EERQDEHGYISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 607
E++ D+ + R QF RR+ LPEN D V++ + +GVLTV P+ +A+
Sbjct: 88 EDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPKAEVKKPEVKAIE 146
Query: 608 IT 613
I+
Sbjct: 147 IS 148
>03_02_0485 - 8808139-8808618
Length = 159
Score = 37.9 bits (84), Expect = 0.011
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +2
Query: 431 KHEERQDEHGYISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 601
+ EE+ D+ + R +F RR+ LPEN P+ +++ + +GVLTV P+ + ++
Sbjct: 96 EQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASM-ENGVLTVTVPKEEPKKPDVKS 154
Query: 602 VPIT 613
+ I+
Sbjct: 155 IQIS 158
>01_01_0231 + 1951047-1951499
Length = 150
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 437 EERQDEHGYISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVP 607
E++ D+ + R QF RR+ LPEN D V++ + +GVLTV P+ +A+
Sbjct: 89 EDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPKAEVKKPEVKAIE 147
Query: 608 IT 613
I+
Sbjct: 148 IS 149
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.1 bits (72), Expect = 0.31
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 473 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNE-RAVPITQTG 622
+F RR+ +P + V +RL DGVLTV P+ P E R V I G
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAG 190
>02_02_0077 - 6586638-6587165
Length = 175
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 473 QFTRRYALPENCNPDTVESRLSSDGVLTV-IAPRTPAATKNERAVPITQTG 622
+F RR+ LPE+ + D V + DGVLTV + + P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEY-KDGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>06_01_1017 - 7951985-7952425
Length = 146
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +2
Query: 398 RTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLTVIA 565
R A + E + E +D +++ +F R ALP + + + + + GVLTV+
Sbjct: 68 RGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLTVVV 126
Query: 566 PRTPAATKNERAVPI 610
P+ PA + R PI
Sbjct: 127 PKEPAPAR-PRTRPI 140
>05_07_0296 -
29061900-29061923,29062026-29062440,29062529-29062566,
29062689-29062741,29062851-29063034,29064486-29064669,
29064761-29064916,29064998-29065173,29065277-29065454,
29066015-29066421
Length = 604
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 7/100 (7%)
Frame = +2
Query: 368 TLFARRXSQ*RTADGYVIVEGKHEERQDEHGYISRQFTRRYALPE------NCNPDTVES 529
++ R + RTA GY+ + E R+D H + TR+ + + C P T+++
Sbjct: 333 SIVERNVRRARTAVGYLDITRLSELRRDAHPSVFTPSTRKRDVKKLVQEHSPCQPSTLQA 392
Query: 530 RLSSDGV-LTVIAPRTPAATKNERAVPITQTGPVRKEIKE 646
+ G+ + I R N+ VP T+ + KE KE
Sbjct: 393 DAYTTGLSMKEIERRRKIGAANKGKVPWTKGRKLSKEHKE 432
>05_02_0003 +
5520331-5520476,5520572-5520644,5520762-5520928,
5520929-5521223,5521531-5521674,5521756-5521890,
5522004-5522093,5523702-5523809,5523905-5523986,
5525362-5525417,5525888-5525986,5526090-5526394,
5526898-5527075,5527167-5527280,5527376-5527507,
5527614-5527718
Length = 742
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 449 DEHGYISRQFTRRYA-LPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGP 625
D+ + + FTR Y+ N RL + ++ P + K++ V T P
Sbjct: 323 DDISTVCKWFTREYSDTTYGKNAQLAAKRLKATQPIST-QPDKEESNKDDLFVEPIYTIP 381
Query: 626 VRKEIKEPTAEVESNETK 679
+KE +PT ++ESN T+
Sbjct: 382 AKKEEVQPTKDLESNSTE 399
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 473 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPA-ATKNERAVPIT--QTGPVRKEIK 643
+F + + LP +CN D + ++ ++ + + +TP+ T + P+T P + E +
Sbjct: 80 RFQKDFQLPADCNVDGIRAKFENEALTITLPKKTPSPLTPSPTPSPVTPPPQQPPQPEPR 139
Query: 644 EPTA 655
P A
Sbjct: 140 RPPA 143
>07_03_0132 - 14011468-14012124
Length = 218
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -2
Query: 285 FHGREXDAGQRWRDDGR 235
+HGRE D G+R RD GR
Sbjct: 120 WHGREEDGGERARDHGR 136
>11_05_0004 -
18269416-18269473,18270319-18270509,18271061-18272004,
18272083-18272254,18272332-18272407,18272498-18272617,
18272795-18272959,18273048-18273138,18273673-18273757,
18273873-18274043,18274151-18274207,18274290-18274385,
18275223-18275365,18275464-18275530
Length = 811
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +2
Query: 497 PENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTAEVESNET 676
PE +P +E +S V + PRT N A+P + ++ + E E N T
Sbjct: 369 PERVSPWQIEPAVSPPPVNPLPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGT 428
Query: 677 KQ 682
++
Sbjct: 429 QR 430
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,670,863
Number of Sequences: 37544
Number of extensions: 268112
Number of successful extensions: 850
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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