Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_I06
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    26   0.54 
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    26   0.54 
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    26   0.54 
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    26   0.54 
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    26   0.54 
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    24   2.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.9  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   8.7  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 86  LANDYNVSQFNNISF*ILKFDCNY 157
           L+N+YN S +NN ++  L ++ NY
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 86  LANDYNVSQFNNISF*ILKFDCNY 157
           L+N+YN S +NN ++  L ++ NY
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 86  LANDYNVSQFNNISF*ILKFDCNY 157
           L+N+YN S +NN ++  L ++ NY
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 86  LANDYNVSQFNNISF*ILKFDCNY 157
           L+N+YN S +NN ++  L ++ NY
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 25.8 bits (54), Expect = 0.54
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +2

Query: 86  LANDYNVSQFNNISF*ILKFDCNY 157
           L+N+YN S +NN ++  L ++ NY
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNINY 108


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 86  LANDYNVSQFNNISF*ILKFDCNY 157
           L+N+YN S +NN ++  L ++ N+
Sbjct: 85  LSNNYNYSNYNNNNYKQLCYNINH 108


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 715 GASSLYIKKCPLKGSHSSKWRDVKN 641
           G  S  ++  P+K S SS WR ++N
Sbjct: 434 GDESDVVELQPVKSSKSSGWRKLRN 458


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -1

Query: 659 VERC*KQRHNLRHFTLFINCYIHIISTSYTSAISLSLPTITCLQVN 522
           +ER     H LRH+   +   I  I  ++  A+  ++P  T + +N
Sbjct: 130 IERYLAIYHPLRHYRSGLKRAIRSIFGAWLIALIFAMPFATYVDIN 175


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,298
Number of Sequences: 438
Number of extensions: 4216
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)