Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H24
         (867 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   6.9  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   9.1  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 417 TWRAPPPGTNFWN 455
           T+RA  PGT+FW+
Sbjct: 411 TFRADNPGTHFWH 423


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 665 GGGXGXPQGVXXXXPPGSPFXGG 597
           GGG G   G       GSP+ GG
Sbjct: 683 GGGAGSSGGSGGGLASGSPYGGG 705


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 208 KVWSPDIMCVNGGD 249
           KVW PDI+  N  D
Sbjct: 107 KVWKPDIVLFNNAD 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,131
Number of Sequences: 2352
Number of extensions: 14594
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)