Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H24
         (867 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...    64   1e-10
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical ...    28   7.5  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    28   7.5  

>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
 Frame = +2

Query: 152 LKDIANKLRIDSIVATNASKSGHPTSCASMAEIMSVLFFHTMRYXISGPXXLPXKDLFFP 331
           L+D AN++RI SI  T ASKSGHPTS  S AEIMS LFF  M+Y ++ P           
Sbjct: 11  LEDAANRMRISSIEMTCASKSGHPTSSTSAAEIMSTLFFSEMKYDVAEPKSASADRFVLS 70

Query: 332 R-VPXAXLYPAWPKPAXPLXN--LKXCXLXLXLEG-PPPRNKFLE 454
           +      LY AW +         L    +   +EG P PR  F++
Sbjct: 71  KGHACPILYAAWEEAGLLSHEQVLSLRKIDSDIEGHPTPRLNFID 115


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/69 (27%), Positives = 23/69 (33%), Gaps = 3/69 (4%)
 Frame = +3

Query: 528 PKGVFPXGEKKNPXGXF---GVFXFFPPXKXGTXGXXXXNPLGXXXPXPLXKXLGNFKPP 698
           P G+ P G+       F    V   F P   G  G     P+      P    +G   PP
Sbjct: 48  PSGILPPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107

Query: 699 PKRXXXPPP 725
           P     PPP
Sbjct: 108 PPMFGAPPP 116


>AF025467-2|AAN65301.1|  505|Caenorhabditis elegans Hypothetical
           protein R148.5b protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = +3

Query: 585 FXFFPPXKXGTXGXXXXNPLGXXXPXPLXKXLGNFKPPPKRXXXPPP 725
           F FFPP   G       + +G   P P      +F   P R   PPP
Sbjct: 293 FGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPP 339


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/47 (31%), Positives = 18/47 (38%)
 Frame = +3

Query: 585 FXFFPPXKXGTXGXXXXNPLGXXXPXPLXKXLGNFKPPPKRXXXPPP 725
           F FFPP   G       + +G   P P      +F   P R   PPP
Sbjct: 293 FGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPP 339


>AF039052-9|AAF98625.1|  302|Caenorhabditis elegans Hypothetical
           protein T22D1.2 protein.
          Length = 302

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
 Frame = +3

Query: 543 PXGEKKNPXGXFGVFXFFPPXKXGTXGXXXXNPLGXXXPXPLXKXLGNFK----PPPKRX 710
           P GE ++  G        PP   GT G     P G   P  L    GN      PPPK  
Sbjct: 47  PTGEPQDLSGEGNASRRPPPPPKGT-GTPPPPPTGE--PQDLSAEEGNASRRPPPPPKGT 103

Query: 711 XXPPPXXGGE 740
             PPP   GE
Sbjct: 104 GTPPPPPTGE 113


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
 Frame = +3

Query: 597 PPXKXGTXGXXXXN-PLGXXXPXPLXKXLGNFKPPPKRXXXPPPXXGG 737
           PP   G       N P+    P PL + L    PPP     PPP  GG
Sbjct: 544 PPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPP---PPPPPMLGG 588


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,391,320
Number of Sequences: 27780
Number of extensions: 345508
Number of successful extensions: 863
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)