Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H22
         (925 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       30   3.0  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    28   9.1  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    28   9.1  
07_01_0080 + 587674-588510                                             28   9.1  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 18/45 (40%), Positives = 18/45 (40%)
 Frame = -3

Query: 611 GXXQXPPLGXXKXXPPXXXPGAGGFXGGXGXXXXKXXPXXPGGGG 477
           G    PP G     PP   PGAGG  G          P  PGGGG
Sbjct: 103 GGGARPPGGGGGGGPPSLPPGAGGGGGA--------RPPAPGGGG 139


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 477 PPPPRXXGXXFXXPXPXPPXKTPGP 551
           PPPPR  G     P P PP K  GP
Sbjct: 615 PPPPRPPG---APPPPPPPGKPGGP 636


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/25 (52%), Positives = 13/25 (52%)
 Frame = +3

Query: 477 PPPPRXXGXXFXXPXPXPPXKTPGP 551
           PPPPR  G     P P PP K  GP
Sbjct: 920 PPPPRPPG---APPPPPPPGKPGGP 941


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/40 (35%), Positives = 14/40 (35%)
 Frame = +3

Query: 432 PXPGGXXXXFXXXKXPPPPRXXGXXFXXPXPXPPXKTPGP 551
           P  GG          PPPP   G     P P PP   P P
Sbjct: 80  PRLGGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPPPPP 119


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,510,213
Number of Sequences: 37544
Number of extensions: 224593
Number of successful extensions: 966
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)