Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H21
(966 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein. 46 2e-04
BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein. 46 2e-04
BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein. 46 2e-04
Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group prote... 45 5e-04
BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein. 45 5e-04
BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A... 43 0.002
BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A... 43 0.002
AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein. 43 0.002
AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A... 43 0.002
AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens ... 43 0.002
AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX... 43 0.002
D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein. 39 0.031
AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box... 39 0.031
Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein. 38 0.041
X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein. 38 0.041
U13695-1|AAA63922.1| 932|Homo sapiens hPMS1 protein. 38 0.041
M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2 pro... 38 0.041
BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box... 38 0.041
BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box... 38 0.041
BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein. 38 0.041
BC096332-1|AAH96332.1| 920|Homo sapiens PMS1 protein protein. 38 0.041
BC096330-1|AAH96330.1| 920|Homo sapiens PMS1 protein protein. 38 0.041
BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box... 38 0.041
AY540751-1|ABB04020.1| 659|Homo sapiens rhabdomyosarcoma antige... 38 0.041
AY540750-1|ABB04019.1| 584|Homo sapiens rhabdomyosarcoma antige... 38 0.041
AY267352-1|AAO89079.1| 932|Homo sapiens PMS1 postmeiotic segreg... 38 0.041
AB102875-1|BAD89404.1| 893|Homo sapiens PMS1 nirs variant 7 pro... 38 0.041
AB102869-1|BAD89398.1| 667|Homo sapiens PMS1 nirs variant 1 pro... 38 0.041
L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 38 0.055
BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box... 38 0.055
AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein. 38 0.055
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 38 0.055
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 38 0.055
X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein. 38 0.072
X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for ... 38 0.072
X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for ... 38 0.072
X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for ... 38 0.072
U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin pro... 38 0.072
EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box... 38 0.072
EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box... 38 0.072
CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein. 38 0.072
BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box... 38 0.072
BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box... 38 0.072
BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box... 38 0.072
BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box... 38 0.072
BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding transc... 38 0.072
BC031423-1|AAH31423.1| 313|Homo sapiens UBTF protein protein. 38 0.072
BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box... 38 0.072
BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box... 38 0.072
AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group pro... 38 0.072
AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box... 38 0.072
M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box p... 37 0.096
BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein. 37 0.096
BC005116-1|AAH05116.1| 709|Homo sapiens structure specific reco... 37 0.096
BC004408-1|AAH04408.2| 317|Homo sapiens high-mobility group 20B... 37 0.13
BC003505-1|AAH03505.2| 317|Homo sapiens high-mobility group 20B... 37 0.13
BC002552-1|AAH02552.1| 317|Homo sapiens HMG20B protein protein. 37 0.13
AL355709-1|CAB90809.2| 317|Homo sapiens HMG20B protein. 37 0.13
AF331191-1|AAG60060.1| 317|Homo sapiens structural DNA-binding ... 37 0.13
AF288679-1|AAG01174.1| 317|Homo sapiens smarce1-related protein... 37 0.13
AF146223-1|AAF66707.1| 317|Homo sapiens HMG domain protein HMGX... 37 0.13
AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box... 36 0.17
AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box... 36 0.29
BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix... 35 0.51
BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix... 35 0.51
BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix... 35 0.51
BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix... 35 0.51
AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein. 35 0.51
L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein. 33 1.2
Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group (nonh... 33 1.6
M62810-1|AAA59849.1| 246|Homo sapiens mitochondrial transcripti... 33 1.6
CR407653-1|CAG28581.1| 246|Homo sapiens TFAM protein. 33 1.6
BT019659-1|AAV38465.1| 246|Homo sapiens transcription factor A,... 33 1.6
BT019658-1|AAV38464.1| 246|Homo sapiens transcription factor A,... 33 1.6
BC126366-1|AAI26367.1| 246|Homo sapiens transcription factor A,... 33 1.6
U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream bi... 32 3.6
BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining re... 32 3.6
AB022441-1|BAA37149.1| 501|Homo sapiens Sox30 protein typeII pr... 32 3.6
AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein. 32 3.6
AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1 pro... 31 4.8
BC104482-1|AAI04483.1| 103|Homo sapiens TFAM protein protein. 31 6.3
BC072003-1|AAH72003.1| 233|Homo sapiens SOX15 protein protein. 31 6.3
BC018628-1|AAH18628.1| 99|Homo sapiens Unknown (protein for IM... 31 6.3
BC000985-1|AAH00985.1| 233|Homo sapiens SRY (sex determining re... 31 6.3
AJ308590-1|CAC34632.1| 158|Homo sapiens upstream binding transc... 31 6.3
AB006867-1|BAA25663.1| 233|Homo sapiens hSOX20 protein protein. 31 6.3
U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein. 31 8.3
BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for MG... 31 8.3
AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open read... 31 8.3
AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open read... 31 8.3
>BC103851-1|AAI03852.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQL-DME-----TKTQMAT 448
N PKRPL+ FF F S+ P + + NPGIS W L D E TK
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKLK 86
Query: 449 EYQKDLEDY 475
+Y+KD+ DY
Sbjct: 87 KYEKDVADY 95
>BC103850-1|AAI03851.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQL-DME-----TKTQMAT 448
N PKRPL+ FF F S+ P + + NPGIS W L D E TK
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKLK 86
Query: 449 EYQKDLEDY 475
+Y+KD+ DY
Sbjct: 87 KYEKDVADY 95
>BC103849-1|AAI03850.1| 130|Homo sapiens HMG4L protein protein.
Length = 130
Score = 46.0 bits (104), Expect = 2e-04
Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQL-DME-----TKTQMAT 448
N PKRPL+ FF F S+ P + + NPGIS W L D E TK
Sbjct: 27 NAPKRPLSGFFLFCSEFCPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYVTKVAKLK 86
Query: 449 EYQKDLEDY 475
+Y+KD+ DY
Sbjct: 87 KYEKDVADY 95
>Y10043-1|CAA71143.1| 200|Homo sapiens high mobility group protein
2a protein.
Length = 200
Score = 44.8 bits (101), Expect = 5e-04
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +2
Query: 260 KSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQ 439
K + + N PKRP + FF F S+ RP + + NPGIS W L+ K
Sbjct: 82 KGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 141
Query: 440 MATEYQKDLEDYNXIKAMYET 502
T+ K E Y A Y++
Sbjct: 142 YITKAAKLKEKYEKDVADYKS 162
>BC070482-1|AAH70482.1| 200|Homo sapiens HMGB3 protein protein.
Length = 200
Score = 44.8 bits (101), Expect = 5e-04
Identities = 26/81 (32%), Positives = 36/81 (44%)
Frame = +2
Query: 260 KSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQ 439
K + + N PKRP + FF F S+ RP + + NPGIS W L+ K
Sbjct: 82 KGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQP 141
Query: 440 MATEYQKDLEDYNXIKAMYET 502
T+ K E Y A Y++
Sbjct: 142 YITKAAKLKEKYEKDVADYKS 162
>BT006716-1|AAP35362.1| 347|Homo sapiens high-mobility group 20A
protein.
Length = 347
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PK PLT + +FM++ R L AK P + W +L E K + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 467 EDY 475
E Y
Sbjct: 161 ERY 163
>BC021959-1|AAH21959.1| 347|Homo sapiens high-mobility group 20A
protein.
Length = 347
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PK PLT + +FM++ R L AK P + W +L E K + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 467 EDY 475
E Y
Sbjct: 161 ERY 163
>AL355737-1|CAB90816.1| 347|Homo sapiens HMG20A protein.
Length = 347
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PK PLT + +FM++ R L AK P + W +L E K + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 467 EDY 475
E Y
Sbjct: 161 ERY 163
>AK223100-1|BAD96820.1| 347|Homo sapiens high-mobility group 20A
variant protein.
Length = 347
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PK PLT + +FM++ R L AK P + W +L E K + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 467 EDY 475
E Y
Sbjct: 161 ERY 163
>AK001601-1|BAA91782.1| 347|Homo sapiens protein ( Homo sapiens
cDNA FLJ10739 fis, clone NT2RP3001472, weakly similar to
NONHISTONE CHROMOSOMAL PROTEIN 6A. ).
Length = 347
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PK PLT + +FM++ R L AK P + W +L E K + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 467 EDY 475
E Y
Sbjct: 161 ERY 163
>AF146222-1|AAF66706.1| 347|Homo sapiens HMG domain protein HMGX1
protein.
Length = 347
Score = 42.7 bits (96), Expect = 0.002
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PK PLT + +FM++ R L AK P + W +L E K + E +D
Sbjct: 101 NAPKSPLTGYVRFMNERREQLRAKRPEVPFPEITRMLGNEWSKLPPEEKQRYLDEADRDK 160
Query: 467 EDY 475
E Y
Sbjct: 161 ERY 163
>D63874-1|BAA09924.1| 215|Homo sapiens HMG-1 protein.
Length = 215
Score = 38.7 bits (86), Expect = 0.031
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + +K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAEKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>AB208998-1|BAD92235.1| 176|Homo sapiens high-mobility group box 1
variant protein.
Length = 176
Score = 38.7 bits (86), Expect = 0.031
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 95 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 154
Query: 467 EDYNXIKAM 493
E Y ++++
Sbjct: 155 EKYEKVRSV 163
>Z17240-1|CAA78938.1| 186|Homo sapiens HMG2B protein.
Length = 186
Score = 38.3 bits (85), Expect = 0.041
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + +++PG+S W + + K + K
Sbjct: 70 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 129
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 130 EKYEKDIAAY 139
>X62534-1|CAA44395.1| 209|Homo sapiens HMG-2 protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.041
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + +++PG+S W + + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>U13695-1|AAA63922.1| 932|Homo sapiens hPMS1 protein.
Length = 932
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 476 N 478
N
Sbjct: 632 N 632
>M83665-1|AAA58659.1| 209|Homo sapiens high mobility group 2
protein protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.041
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + +++PG+S W + + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BT019783-1|AAV38586.1| 208|Homo sapiens high-mobility group box 2
protein.
Length = 208
Score = 38.3 bits (85), Expect = 0.041
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + +++PG+S W + + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BT019782-1|AAV38585.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.041
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + +++PG+S W + + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BC100019-1|AAI00020.1| 209|Homo sapiens HMGB2 protein protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.041
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + +++PG+S W + + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BC096332-1|AAH96332.1| 920|Homo sapiens PMS1 protein protein.
Length = 920
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 476 N 478
N
Sbjct: 632 N 632
>BC096330-1|AAH96330.1| 920|Homo sapiens PMS1 protein protein.
Length = 920
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 476 N 478
N
Sbjct: 632 N 632
>BC001063-1|AAH01063.1| 209|Homo sapiens high-mobility group box 2
protein.
Length = 209
Score = 38.3 bits (85), Expect = 0.041
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + +++PG+S W + + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>AY540751-1|ABB04020.1| 659|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.10E protein.
Length = 659
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 533 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 592
Query: 476 N 478
N
Sbjct: 593 N 593
>AY540750-1|ABB04019.1| 584|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.10B protein.
Length = 584
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 411 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 470
Query: 476 N 478
N
Sbjct: 471 N 471
>AY267352-1|AAO89079.1| 932|Homo sapiens PMS1 postmeiotic
segregation increased 1 (S. cerevisiae) protein.
Length = 932
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 572 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 631
Query: 476 N 478
N
Sbjct: 632 N 632
>AB102875-1|BAD89404.1| 893|Homo sapiens PMS1 nirs variant 7
protein.
Length = 893
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 533 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 592
Query: 476 N 478
N
Sbjct: 593 N 593
>AB102869-1|BAD89398.1| 667|Homo sapiens PMS1 nirs variant 1
protein.
Length = 667
Score = 38.3 bits (85), Expect = 0.041
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
K+P++ F+ RP L +NP S + A W+ L E K + + KDLE Y
Sbjct: 533 KKPMSASALFVQDHRPQFLIENPKTSLEDATLQIEELWKTLSEEEKLKYEEKATKDLERY 592
Query: 476 N 478
N
Sbjct: 593 N 593
>L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein.
Length = 403
Score = 37.9 bits (84), Expect = 0.055
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGIS-----SKXAIAW--TSXHWQQLDMETKTQMA 445
N PKRP FF F S+ RP + ++PG+S K A W T+ +Q + ++
Sbjct: 291 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 350
Query: 446 TEYQKDLEDY 475
+Y+KD+ Y
Sbjct: 351 EKYKKDIAAY 360
>BC141844-1|AAI41845.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.9 bits (84), Expect = 0.055
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQHYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>AF076675-2|AAF39781.1| 181|Homo sapiens SP100-HMG protein.
Length = 181
Score = 37.9 bits (84), Expect = 0.055
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGIS-----SKXAIAW--TSXHWQQLDMETKTQMA 445
N PKRP FF F S+ RP + ++PG+S K A W T+ +Q + ++
Sbjct: 69 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 128
Query: 446 TEYQKDLEDY 475
+Y+KD+ Y
Sbjct: 129 EKYKKDIAAY 138
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 37.9 bits (84), Expect = 0.055
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGIS-----SKXAIAW--TSXHWQQLDMETKTQMA 445
N PKRP FF F S+ RP + ++PG+S K A W T+ +Q + ++
Sbjct: 767 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 826
Query: 446 TEYQKDLEDY 475
+Y+KD+ Y
Sbjct: 827 EKYKKDIAAY 836
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 37.9 bits (84), Expect = 0.055
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGIS-----SKXAIAW--TSXHWQQLDMETKTQMA 445
N PKRP FF F S+ RP + ++PG+S K A W T+ +Q + ++
Sbjct: 731 NAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAGMWNNTAAADKQFYEKKAAKLK 790
Query: 446 TEYQKDLEDY 475
+Y+KD+ Y
Sbjct: 791 EKYKKDIAAY 800
>X56687-1|CAA40016.1| 727|Homo sapiens autoantigen NOR-90 protein.
Length = 727
Score = 37.5 bits (83), Expect = 0.072
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+PLTP+F+F + R +P +S+ S +++L + K + ++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 473 Y 475
+
Sbjct: 172 F 172
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 254 TKKSAEH--RLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDME 427
+KK A+ + G KPKRP++ F F + R L + P +S + W L +
Sbjct: 355 SKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEK 414
Query: 428 TKTQ 439
K +
Sbjct: 415 KKAK 418
>X53461-1|CAA37548.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 37.5 bits (83), Expect = 0.072
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+PLTP+F+F + R +P +S+ S +++L + K + ++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 473 Y 475
+
Sbjct: 172 F 172
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 254 TKKSAEH--RLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDME 427
+KK A+ + G KPKRP++ F F + R L + P +S + W L +
Sbjct: 392 SKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEK 451
Query: 428 TKTQ 439
K +
Sbjct: 452 KKAK 455
>X53390-1|CAA37469.1| 764|Homo sapiens protein ( Human mRNA for
upstream binding factor (hUBF). ).
Length = 764
Score = 37.5 bits (83), Expect = 0.072
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+PLTP+F+F + R +P +S+ S +++L + K + ++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 473 Y 475
+
Sbjct: 172 F 172
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 254 TKKSAEH--RLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDME 427
+KK A+ + G KPKRP++ F F + R L + P +S + W L +
Sbjct: 392 SKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEK 451
Query: 428 TKTQ 439
K +
Sbjct: 452 KKAK 455
>X12597-1|CAA31110.1| 215|Homo sapiens protein ( Human mRNA for
high mobility group-1 protein (HMG-1). ).
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>U51677-1|AAB08987.1| 215|Homo sapiens non-histone chromatin
protein HMG1 protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>EU012027-1|ABS29271.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>EF157968-1|ABM47301.1| 215|Homo sapiens high mobility group box 1
protein protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>CR456863-1|CAG33144.1| 215|Homo sapiens HMGB1 protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BT020159-1|AAV38961.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BT006940-1|AAP35586.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BC067732-1|AAH67732.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BC066889-1|AAH66889.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BC042297-1|AAH42297.1| 727|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 727
Score = 37.5 bits (83), Expect = 0.072
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+PLTP+F+F + R +P +S+ S +++L + K + ++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 473 Y 475
+
Sbjct: 172 F 172
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 254 TKKSAEH--RLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDME 427
+KK A+ + G KPKRP++ F F + R L + P +S + W L +
Sbjct: 355 SKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEK 414
Query: 428 TKTQ 439
K +
Sbjct: 415 KKAK 418
>BC031423-1|AAH31423.1| 313|Homo sapiens UBTF protein protein.
Length = 313
Score = 37.5 bits (83), Expect = 0.072
Identities = 15/61 (24%), Positives = 34/61 (55%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+PLTP+F+F + R +P +S+ S +++L + K + ++Q++ ++
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQE 171
Query: 473 Y 475
+
Sbjct: 172 F 172
>BC030981-1|AAH30981.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>BC003378-1|AAH03378.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>AY377859-1|AAQ91389.1| 215|Homo sapiens high mobility group
protein 1 protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>AL353648-1|CAI15600.1| 215|Homo sapiens high-mobility group box 1
protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.072
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>M86737-1|AAA58660.1| 709|Homo sapiens high mobility group box
protein.
Length = 709
Score = 37.1 bits (82), Expect = 0.096
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 KKSAEHRLGL--NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMET 430
KK E + G N PKRP++ + +++ R + + +PGIS W+ + E
Sbjct: 533 KKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEK 592
Query: 431 KTQMATEYQKDLEDYNXIKAMYETSLXEEHK 523
K + + + DY YE E K
Sbjct: 593 KEEWDRKAEDARRDYEKAMKEYEGGRGESSK 623
>BC091486-1|AAH91486.1| 633|Homo sapiens SSRP1 protein protein.
Length = 633
Score = 37.1 bits (82), Expect = 0.096
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 KKSAEHRLGL--NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMET 430
KK E + G N PKRP++ + +++ R + + +PGIS W+ + E
Sbjct: 533 KKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEK 592
Query: 431 KTQMATEYQKDLEDYNXIKAMYETSLXEEHK 523
K + + + DY YE E K
Sbjct: 593 KEEWDRKAEDARRDYEKAMKEYEGGRGESSK 623
>BC005116-1|AAH05116.1| 709|Homo sapiens structure specific
recognition protein 1 protein.
Length = 709
Score = 37.1 bits (82), Expect = 0.096
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 257 KKSAEHRLGL--NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMET 430
KK E + G N PKRP++ + +++ R + + +PGIS W+ + E
Sbjct: 533 KKPVEVKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEK 592
Query: 431 KTQMATEYQKDLEDYNXIKAMYETSLXEEHK 523
K + + + DY YE E K
Sbjct: 593 KEEWDRKAEDARRDYEKAMKEYEGGRGESSK 623
>BC004408-1|AAH04408.2| 317|Homo sapiens high-mobility group 20B
protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/91 (18%), Positives = 39/91 (42%)
Frame = +2
Query: 233 PIQSCDYTKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQ 412
P++ + K ++ N PK P+T + +F+++ R + ++P + W
Sbjct: 50 PVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWS 109
Query: 413 QLDMETKTQMATEYQKDLEDYNXIKAMYETS 505
+L K + E +++ + Y Y+ S
Sbjct: 110 KLQPTEKQRYLDEAEREKQQYMKELRAYQQS 140
>BC003505-1|AAH03505.2| 317|Homo sapiens high-mobility group 20B
protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/91 (18%), Positives = 39/91 (42%)
Frame = +2
Query: 233 PIQSCDYTKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQ 412
P++ + K ++ N PK P+T + +F+++ R + ++P + W
Sbjct: 50 PVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWS 109
Query: 413 QLDMETKTQMATEYQKDLEDYNXIKAMYETS 505
+L K + E +++ + Y Y+ S
Sbjct: 110 KLQPTEKQRYLDEAEREKQQYMKELRAYQQS 140
>BC002552-1|AAH02552.1| 317|Homo sapiens HMG20B protein protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/91 (18%), Positives = 39/91 (42%)
Frame = +2
Query: 233 PIQSCDYTKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQ 412
P++ + K ++ N PK P+T + +F+++ R + ++P + W
Sbjct: 50 PVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWS 109
Query: 413 QLDMETKTQMATEYQKDLEDYNXIKAMYETS 505
+L K + E +++ + Y Y+ S
Sbjct: 110 KLQPTEKQRYLDEAEREKQQYMKELRAYQQS 140
>AL355709-1|CAB90809.2| 317|Homo sapiens HMG20B protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/91 (18%), Positives = 39/91 (42%)
Frame = +2
Query: 233 PIQSCDYTKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQ 412
P++ + K ++ N PK P+T + +F+++ R + ++P + W
Sbjct: 50 PVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWS 109
Query: 413 QLDMETKTQMATEYQKDLEDYNXIKAMYETS 505
+L K + E +++ + Y Y+ S
Sbjct: 110 KLQPTEKQRYLDEAEREKQQYMKELRAYQQS 140
>AF331191-1|AAG60060.1| 317|Homo sapiens structural DNA-binding
protein BRAF35 protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/91 (18%), Positives = 39/91 (42%)
Frame = +2
Query: 233 PIQSCDYTKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQ 412
P++ + K ++ N PK P+T + +F+++ R + ++P + W
Sbjct: 50 PVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWS 109
Query: 413 QLDMETKTQMATEYQKDLEDYNXIKAMYETS 505
+L K + E +++ + Y Y+ S
Sbjct: 110 KLQPTEKQRYLDEAEREKQQYMKELRAYQQS 140
>AF288679-1|AAG01174.1| 317|Homo sapiens smarce1-related protein
protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/91 (18%), Positives = 39/91 (42%)
Frame = +2
Query: 233 PIQSCDYTKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQ 412
P++ + K ++ N PK P+T + +F+++ R + ++P + W
Sbjct: 50 PVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWS 109
Query: 413 QLDMETKTQMATEYQKDLEDYNXIKAMYETS 505
+L K + E +++ + Y Y+ S
Sbjct: 110 KLQPTEKQRYLDEAEREKQQYMKELRAYQQS 140
>AF146223-1|AAF66707.1| 317|Homo sapiens HMG domain protein HMGX2
protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/91 (18%), Positives = 39/91 (42%)
Frame = +2
Query: 233 PIQSCDYTKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQ 412
P++ + K ++ N PK P+T + +F+++ R + ++P + W
Sbjct: 50 PVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWS 109
Query: 413 QLDMETKTQMATEYQKDLEDYNXIKAMYETS 505
+L K + E +++ + Y Y+ S
Sbjct: 110 KLQPTEKQRYLDEAEREKQQYMKELRAYQQS 140
>AL353648-3|CAI15603.1| 158|Homo sapiens high-mobility group box 1
protein.
Length = 158
Score = 36.3 bits (80), Expect = 0.17
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKRP + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDY 475
E Y
Sbjct: 153 EKY 155
>AL353648-2|CAI15601.1| 162|Homo sapiens high-mobility group box 1
protein.
Length = 162
Score = 35.5 bits (78), Expect = 0.29
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGIS 373
N PKRP + FF F S+ RP + ++PG+S
Sbjct: 93 NAPKRPPSAFFLFCSEYRPKIKGEHPGLS 121
>BT007176-1|AAP35840.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.51
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
P +PL P+ ++ ++ + A NP + W+ L E K + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 473 YNXIKAMYETS 505
YN Y S
Sbjct: 126 YNESMKAYHNS 136
>BC063700-1|AAH63700.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.51
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
P +PL P+ ++ ++ + A NP + W+ L E K + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 473 YNXIKAMYETS 505
YN Y S
Sbjct: 126 YNESMKAYHNS 136
>BC011017-1|AAH11017.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.51
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
P +PL P+ ++ ++ + A NP + W+ L E K + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 473 YNXIKAMYETS 505
YN Y S
Sbjct: 126 YNESMKAYHNS 136
>BC007082-1|AAH07082.1| 411|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.51
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
P +PL P+ ++ ++ + A NP + W+ L E K + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 473 YNXIKAMYETS 505
YN Y S
Sbjct: 126 YNESMKAYHNS 136
>AF035262-1|AAC04509.1| 411|Homo sapiens BAF57 protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.51
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
P +PL P+ ++ ++ + A NP + W+ L E K + EY+ + +
Sbjct: 66 PDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYEAEKIE 125
Query: 473 YNXIKAMYETS 505
YN Y S
Sbjct: 126 YNESMKAYHNS 136
>L08048-1|AAA64970.1| 216|Homo sapiens HMG-1 protein.
Length = 216
Score = 33.5 bits (73), Expect = 1.2
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKR + FF F S+ RP + ++PG+S W + K + K
Sbjct: 93 NAPKRLPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>Z95115-3|CAB62951.1| 211|Homo sapiens high-mobility group
(nonhistone chromosomal) protein 1-like 10 protein.
Length = 211
Score = 33.1 bits (72), Expect = 1.6
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N PKR + FF F S RP + ++PG+S W + K + K
Sbjct: 93 NAPKRTPSAFFLFCSAYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLK 152
Query: 467 EDYNXIKAMY 496
E Y A Y
Sbjct: 153 EKYEKDIAAY 162
>M62810-1|AAA59849.1| 246|Homo sapiens mitochondrial transcription
factor 1 protein.
Length = 246
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+P++ + +F + P A+NP + I + W++L K Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 473 Y 475
Y
Sbjct: 110 Y 110
>CR407653-1|CAG28581.1| 246|Homo sapiens TFAM protein.
Length = 246
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+P++ + +F + P A+NP + I + W++L K Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 473 Y 475
Y
Sbjct: 110 Y 110
>BT019659-1|AAV38465.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+P++ + +F + P A+NP + I + W++L K Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 473 Y 475
Y
Sbjct: 110 Y 110
>BT019658-1|AAV38464.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+P++ + +F + P A+NP + I + W++L K Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 473 Y 475
Y
Sbjct: 110 Y 110
>BC126366-1|AAI26367.1| 246|Homo sapiens transcription factor A,
mitochondrial protein.
Length = 246
Score = 33.1 bits (72), Expect = 1.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLED 472
PK+P++ + +F + P A+NP + I + W++L K Y+ + +
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWRELPDSKKKIYQDAYRAEWQV 109
Query: 473 Y 475
Y
Sbjct: 110 Y 110
>U65487-1|AAC51239.1| 654|Homo sapiens ribosomal RNA upstream
binding transcription factor protein.
Length = 654
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 254 TKKSAEH--RLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDME 427
+KK A+ + G KPKRP++ F F + R L + P +S + W L +
Sbjct: 234 SKKPAQEGGKGGSEKPKRPVSAMFIFSEEKRRQLQEERPELSESELTRLLARMWNDLSEK 293
Query: 428 TKTQ 439
K +
Sbjct: 294 KKAK 297
>BC033492-1|AAH33492.2| 753|Homo sapiens SRY (sex determining
region Y)-box 30 protein.
Length = 753
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
KRP+ F + RPAL NP ++ W +L E K E QK E +
Sbjct: 338 KRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKH 397
>AB022441-1|BAA37149.1| 501|Homo sapiens Sox30 protein typeII
protein.
Length = 501
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
KRP+ F + RPAL NP ++ W +L E K E QK E +
Sbjct: 338 KRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKH 397
>AB022083-1|BAA37146.1| 753|Homo sapiens SOX30 protein protein.
Length = 753
Score = 31.9 bits (69), Expect = 3.6
Identities = 18/60 (30%), Positives = 24/60 (40%)
Frame = +2
Query: 296 KRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDLEDY 475
KRP+ F + RPAL NP ++ W +L E K E QK E +
Sbjct: 338 KRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKH 397
>AC007277-1|AAF19244.1| 191|Homo sapiens WUGSC:H_NH0244E06.1
protein.
Length = 191
Score = 31.5 bits (68), Expect = 4.8
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +2
Query: 254 TKKSAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPG-----ISSKXAIAW--TSXHWQ 412
TKK E N PKRP + F F S+ P + ++PG ++ K W T +
Sbjct: 85 TKKKFEDS---NAPKRPPSAFLLFCSEYCPKIKGEHPGLPISDVAKKLVEMWNNTFADDK 141
Query: 413 QLDMETKTQMATEYQKDLEDY 475
QL + ++ +Y+KD Y
Sbjct: 142 QLCEKKAAKLKEKYKKDTATY 162
>BC104482-1|AAI04483.1| 103|Homo sapiens TFAM protein protein.
Length = 103
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQL 418
PK+P++ + +F + P A+NP + I + W++L
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWREL 91
>BC072003-1|AAH72003.1| 233|Homo sapiens SOX15 protein protein.
Length = 233
Score = 31.1 bits (67), Expect = 6.3
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 263 SAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQM 442
+A L L K KRP+ F + S R + +NP + + W+ LD + K
Sbjct: 39 AAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPF 98
Query: 443 ATEYQK 460
E ++
Sbjct: 99 VEEAKR 104
>BC018628-1|AAH18628.1| 99|Homo sapiens Unknown (protein for
IMAGE:4552415) protein.
Length = 99
Score = 31.1 bits (67), Expect = 6.3
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQL 418
PK+P++ + +F + P A+NP + I + W++L
Sbjct: 50 PKKPVSSYLRFSKEQLPIFKAQNPDAKTTELIRRIAQRWREL 91
>BC000985-1|AAH00985.1| 233|Homo sapiens SRY (sex determining
region Y)-box 15 protein.
Length = 233
Score = 31.1 bits (67), Expect = 6.3
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 263 SAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQM 442
+A L L K KRP+ F + S R + +NP + + W+ LD + K
Sbjct: 39 AAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPF 98
Query: 443 ATEYQK 460
E ++
Sbjct: 99 VEEAKR 104
>AJ308590-1|CAC34632.1| 158|Homo sapiens upstream binding
transcription factor, RNA polymerase I protein.
Length = 158
Score = 31.1 bits (67), Expect = 6.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 293 PKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETK 433
PK+PLTP+F+F + R +P +S+ S +++L + K
Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKK 158
>AB006867-1|BAA25663.1| 233|Homo sapiens hSOX20 protein protein.
Length = 233
Score = 31.1 bits (67), Expect = 6.3
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 263 SAEHRLGLNKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQM 442
+A L L K KRP+ F + S R + +NP + + W+ LD + K
Sbjct: 39 AAPGTLPLEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPF 98
Query: 443 ATEYQK 460
E ++
Sbjct: 99 VEEAKR 104
>U80736-1|AAB91435.1| 331|Homo sapiens CAGF9 protein.
Length = 331
Score = 30.7 bits (66), Expect = 8.3
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N+P++P++ + F + A+ +NP + + W L E K + +
Sbjct: 8 NEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAK 67
Query: 467 EDYNXIKAMYETSLXEEHKA 526
++Y A Y SL + A
Sbjct: 68 KEYLKALAAYRASLVSKAAA 87
>BC007636-1|AAH07636.1| 464|Homo sapiens Unknown (protein for
MGC:15880) protein.
Length = 464
Score = 30.7 bits (66), Expect = 8.3
Identities = 16/74 (21%), Positives = 31/74 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N+P++P++ + F + A+ +NP + + W L E K + +
Sbjct: 202 NEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAK 261
Query: 467 EDYNXIKAMYETSL 508
++Y A Y SL
Sbjct: 262 KEYLKALAAYRASL 275
>AL121587-3|CAI21561.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 30.7 bits (66), Expect = 8.3
Identities = 16/74 (21%), Positives = 31/74 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N+P++P++ + F + A+ +NP + + W L E K + +
Sbjct: 202 NEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAK 261
Query: 467 EDYNXIKAMYETSL 508
++Y A Y SL
Sbjct: 262 KEYLKALAAYRASL 275
>AL034419-4|CAI42201.1| 464|Homo sapiens chromosome 20 open reading
frame 100 protein.
Length = 464
Score = 30.7 bits (66), Expect = 8.3
Identities = 16/74 (21%), Positives = 31/74 (41%)
Frame = +2
Query: 287 NKPKRPLTPFFKFMSQMRPALLAKNPGISSKXAIAWTSXHWQQLDMETKTQMATEYQKDL 466
N+P++P++ + F + A+ +NP + + W L E K + +
Sbjct: 202 NEPQKPVSAYALFFRDTQAAIKGQNPSATFGDVSKIVASMWDSLGEEQKQAYKRKTEAAK 261
Query: 467 EDYNXIKAMYETSL 508
++Y A Y SL
Sbjct: 262 KEYLKALAAYRASL 275
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,857,899
Number of Sequences: 237096
Number of extensions: 1685059
Number of successful extensions: 1981
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 1921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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