Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H18
(1012 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.028
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.064
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.084
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 0.10
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 29 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 1.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 2.4
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 3.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.2
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 7.3
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 7.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXPPXXXVPXXLXXPPXXPAXXXGG 1011
P PPP + PPPPPP PP PP PA GG
Sbjct: 750 PVPPPAPIMGGPPPPPP--PPGVAGAGPPPPPPPPPAVSAGG 789
Score = 33.1 bits (72), Expect = 0.064
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXPPXXXVPXXLXXPPXXPAXXXGG 1011
P PPP + P P P P PP + PP P G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG 774
Score = 30.3 bits (65), Expect = 0.45
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 824 TXXPNPPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXPXPHP 946
T P P P P PPP + PPP P P P
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.3 bits (75), Expect = 0.028
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXP 945
P PPPP E PPPPP P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 33.5 bits (73), Expect = 0.048
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXPPXXXV 960
P PPPP PP PPP PP V
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYV 33
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 919 PPPPPPPXPPXXXVPXXLXXPPXXP 993
P PPPP PP P PP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.1 bits (72), Expect = 0.064
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXP 945
P PPPP + PPP PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMP 1724
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 895 PPPXLEXXPPPPPPPXPPXXXVPXXLXXPPXXP 993
PP PPPPP PP P PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXPPXXXVP 963
P P P + PP PPP P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/52 (26%), Positives = 15/52 (28%)
Frame = +2
Query: 839 PPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXPXPHPRXXRSPXXSXPLXXXP 994
PP P PPP S PPP P +P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.084
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 839 PPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXPXPHPRXXRSP 964
PP PP P S PP S PPPP P P R P
Sbjct: 337 PPPPPP--PRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXPPXXXVPXXLXXPPXXPA 996
P P PP L PP PP P PP P+
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +2
Query: 839 PPXPPXXX--PXXXXXVSXXPPPXXSSXPPPPXPXPHP 946
PP PP P + PP ++ PPP P P P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 3/54 (5%)
Frame = +2
Query: 842 PXPPXXXPXXXXXVSXXPP---PXXSSXPPPPXPXPHPRXXRSPXXSXPLXXXP 994
P P S PP P S+ PPP P P SP S P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Frame = +2
Query: 833 PNPPXPPXXXPXXXXXVSXXPPPXXSSXPPP-PXPXP 940
P PP P P + P P + PPP P P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 10/43 (23%)
Frame = +1
Query: 886 PXPPPPXLEXXPPP----------PPPPXPPXXXVPXXLXXPP 984
P PPP PP PPPP PP + PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 892 PPPPXLEXXPPPPPPPXPPXXXVPXXLXXPPXXPA 996
PP P PP P P +P PP PA
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 7.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 919 PPPPPPPXP 945
PPPPPPP P
Sbjct: 945 PPPPPPPPP 953
Score = 26.2 bits (55), Expect(2) = 0.10
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 922 PPPPPPXPP 948
PPPPPP PP
Sbjct: 945 PPPPPPPPP 953
Score = 24.6 bits (51), Expect(2) = 0.10
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1
Query: 898 PPXLEXXPPPPPPPXP 945
P + PPPPPP P
Sbjct: 899 PTIITHPTPPPPPPLP 914
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 29.1 bits (62), Expect = 1.0
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 892 PPPPXLEXXPPPPPPPXPPXXXVPXXLXXPPXXP 993
P P PPPPPP P VP P P
Sbjct: 347 PTPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSP 380
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 7.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 919 PPPPPPPXP 945
PPPPPPP P
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect = 7.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 922 PPPPPPXPP 948
PPPPPP PP
Sbjct: 189 PPPPPPPPP 197
Score = 26.2 bits (55), Expect(2) = 1.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 907 LEXXPPPPPPPXPP 948
L PPPPPP PP
Sbjct: 235 LPAPPPPPPPTLPP 248
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 898 PPXLEXXPPPPPPP 939
P PPPPPPP
Sbjct: 184 PSDYNPPPPPPPPP 197
Score = 21.0 bits (42), Expect(2) = 1.1
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +1
Query: 856 SXPXXXXXXXPXPPPPXLE 912
S P P PPPP +E
Sbjct: 182 SLPSDYNPPPPPPPPPAVE 200
Score = 21.0 bits (42), Expect(2) = 3.0
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 928 PPPPXPPXXXV 960
PPPP PP V
Sbjct: 189 PPPPPPPPPAV 199
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 992 GXXGGXXXXXGTXXXGGXGGGGGGGXXSRXGGGGXG 885
G GG G GG GGG GG GG G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -3
Query: 992 GXXGGXXXXXGTXXXGGXGGGGGGGXXSRXGGGGXG 885
G G G GG GGG GG GG G
Sbjct: 153 GFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 833 PNPPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXPXPHPRXXRSPXXSXPLXXXPXXG 1003
P P P P V+ P P S PP P P +P P P G
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/50 (28%), Positives = 18/50 (36%)
Frame = +2
Query: 833 PNPPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXPXPHPRXXRSPXXSXPL 982
P P P P V+ P P S PP P P +P + P+
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = +2
Query: 833 PNPPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXP 934
P P P P V P P S+ PP P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +1
Query: 892 PPPPXLEXXPPPPPPPXPPXXXVPXXLXXPP 984
PP P L PP P P +P PP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPP 1042
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +2
Query: 833 PNPPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXP 934
P P PP P + PP SS PPP P
Sbjct: 145 PRPSIPPPS-PASAPPIPSKAPPIPSSLPPPAQP 177
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 886 PXPPPPXLEXXPPPPPPPXPPXXXVPXXLXXPP 984
P PP P E PP PP P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPP-PSPASAPP 159
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +2
Query: 839 PPXPPXXXPXXXXXVSXXPPPXXSSXPPPPXPXPHPRXXRSPXXSXP 979
PP P PP S PP P P P +P S P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 1010 PPXXXAGXXGGXXXXXGTXXXGGXGGGGGGGXXSRXGGGGXG 885
PP G G GG GG GGG G GG G
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 947 GGXGGGGGGGXXSRXGGGGXG 885
GG GGG GG G GG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFG 211
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 939 GXGXGGGGXLEXXGGGXXLTSXXXXGXXXGGXGGLG 832
G G G GG GG G GG GG G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG 227
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +2
Query: 842 PXPPXXXPXXXXXVSXXPPPXXSSXPP--PPXPXPH 943
P PP P PPP SS P PP P H
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPPAPLTH 764
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 992 GXXGGXXXXXGTXXXGGXGGGGGGGXXSRXGGGG 891
G G G G GGG GG R G GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 7.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 919 PPPPPPPXP 945
PPPPPPP P
Sbjct: 306 PPPPPPPPP 314
Score = 26.2 bits (55), Expect = 7.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 922 PPPPPPXPP 948
PPPPPP PP
Sbjct: 306 PPPPPPPPP 314
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 892 PPPPXLEXXPPPPPPPXPPXXXVPXXLXXPPXXPA 996
P PP P P P PP V + P PA
Sbjct: 590 PQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPA 624
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,071,745
Number of Sequences: 5004
Number of extensions: 26279
Number of successful extensions: 397
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 525259918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -