Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H15
(1101 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.27
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.27
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.27
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.27
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.27
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.4
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.9
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.27
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 852 PXXXXPXXPPPPPXXXXXXXXXXFXPXPPPXXPXXXXXXXXXXPRGGXXKEXPPPPP 682
P P PPPPP P PPP P G PPPPP
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVG----AGAPPPPPPPPP 657
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 829 PPPPPXXXXXVXXXXFXXXPPPXXXXXXXXXXXXXXPRGXKXRXPPPPPPP 677
PPPPP + PPP G PPPPPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAV-----GAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.27
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 852 PXXXXPXXPPPPPXXXXXXXXXXFXPXPPPXXPXXXXXXXXXXPRGGXXKEXPPPPP 682
P P PPPPP P PPP P G PPPPP
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVG----AGAPPPPPPPPP 483
Score = 28.7 bits (61), Expect = 7.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -3
Query: 829 PPPPPXXXXXVXXXXFXXXPPPXXXXXXXXXXXXXXPRGXKXRXPPPPPPP 677
PPPPP + PPP G PPPPPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAV-----GAGAPPPPPPPPP 483
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 825 PPPPXXXXXXXXXXFXPXPPPXXPXXXXXXXXXXPRGGXXKEXPPPPP 682
PPPP P PPP P P GG PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -1
Query: 828 PPPPPXXXXXXXXXXFXPXPPP---XXPXXXXXXXXXXPRGGXXKEXPPPPP 682
PPPPP P PPP P P GG PPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -3
Query: 829 PPPPPXXXXXVXXXXFXXXPPPXXXXXXXXXXXXXXPRGXKXRXPPPPPPP 677
PPPPP + PPP +G PPPPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG----GPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 825 PPPPXXXXXXXXXXFXPXPPPXXPXXXXXXXXXXPRGGXXKEXPPPPP 682
PPPP P PPP P P GG PPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -1
Query: 828 PPPPPXXXXXXXXXXFXPXPPP---XXPXXXXXXXXXXPRGGXXKEXPPPPP 682
PPPPP P PPP P P GG PPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -3
Query: 829 PPPPPXXXXXVXXXXFXXXPPPXXXXXXXXXXXXXXPRGXKXRXPPPPPPP 677
PPPPP + PPP +G PPPPPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG----GPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.5 bits (73), Expect = 0.27
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -1
Query: 825 PPPPXXXXXXXXXXFXPXPPPXXPXXXXXXXXXXPRGGXXKEXPPPPP 682
PPPP P PPP P P GG PPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -1
Query: 828 PPPPPXXXXXXXXXXFXPXPPP---XXPXXXXXXXXXXPRGGXXKEXPPPPP 682
PPPPP P PPP P P GG PPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 31.1 bits (67), Expect = 1.5
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -3
Query: 829 PPPPPXXXXXVXXXXFXXXPPPXXXXXXXXXXXXXXPRGXKXRXPPPPPPP 677
PPPPP + PPP +G PPPPPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG----GPPPPPPP 373
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 683 GGGGGXSXLXPPRXXXXXXXXXXXGXXGGGXGXKXXXXNXXXXXGGGGGXXGXXXXG 853
GG GG PP G GGG G GGGGG G G
Sbjct: 40 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 683 GGGGGXSXLXPPRXXXXXXXXXXXGXXGGGXGXKXXXXNXXXXXGGGGGXXGXXXXG 853
GGGGG + P G GGG G GGGGG G G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 683 GGGGGXSXLXPPRXXXXXXXXXXXGXXGGGXGXKXXXXNXXXXXGGGGGXXGXXXXG 853
GG GG PP G GGG G GGGGG G G
Sbjct: 40 GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGG 96
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +2
Query: 683 GGGGGXSXLXPPRXXXXXXXXXXXGXXGGGXGXKXXXXNXXXXXGGGGGXXGXXXXG 853
GGGGG + P G GGG G GGGGG G G
Sbjct: 67 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGG 123
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = -2
Query: 434 PPXFXXPPQKIXPXXTPPPPXFXXXXXAXXPXFPP 330
PP F PP P PPPP P + P
Sbjct: 52 PPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
Score = 28.7 bits (61), Expect = 7.8
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -2
Query: 437 PPPXFXXPPQKIXPXXTPPPPXFXXXXXAXXPXFPPP 327
PPP PP P PPPP P PPP
Sbjct: 33 PPPPMCAPP----PLPCPPPPICPPQFCPPPPMCPPP 65
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = -2
Query: 437 PPPXFXXPPQKIXPXXTPPPPXFXXXXXAXXPXFPPP 327
PPP PP P PPPP F A P PPP
Sbjct: 726 PPPPQGIPPMGFDP-NKPPPPMFQQGFNAGAP--PPP 759
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -1
Query: 837 PXXPPPPPXXXXXXXXXXFXPXPPPXXPXXXXXXXXXXPRGGXXKEXPPPPP 682
P PPPPP P PPP P G PPPPP
Sbjct: 1336 PSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPT------GVPLPVPPPPP 1381
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 7/47 (14%)
Frame = -2
Query: 446 FLFPPPXFXXPPQKIX-------PXXTPPPPXFXXXXXAXXPXFPPP 327
+ PPP + PPQ P PPPP A P +P P
Sbjct: 61 YAIPPPSYAQPPQPYAQSPIAAVPPPPPPPPPQPAPAQAPAPKYPSP 107
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 5.9
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 828 PPPPPXXXXXXXXXXFXPXPPPXXPXXXXXXXXXXPRGGXXKEXPPPPP 682
PPPPP P PPP P G PPPPP
Sbjct: 542 PPPPPIAGLLAANGTNVPIPPPPPPPLPQNL------SGAPPPPPPPPP 584
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.158 0.564
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,268,997
Number of Sequences: 27780
Number of extensions: 242550
Number of successful extensions: 2273
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2971275592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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