Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H14
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.016
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.016
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.016
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 35 0.083
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 35 0.083
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.13
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 26 0.26
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 26 0.26
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.34
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.34
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 31 1.0
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 31 1.0
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 31 1.0
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.0
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.0
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 3.1
U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical pr... 29 3.1
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 3.1
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 29 3.1
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 29 5.5
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 5.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 5.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 5.5
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 5.5
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 5.5
AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical ... 29 5.5
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 25 6.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 25 6.1
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 26 6.1
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 7.2
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 7.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 28 7.2
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 28 7.2
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.5
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +1
Query: 355 PPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG P GG PPP GG PPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG------LPPISGGPPPPPPPP 765
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +1
Query: 355 PPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG P GG PPP GG PPPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP------------GGCPPPPPPP 775
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +1
Query: 355 PPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG P GG PPP GG PPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGG------LPPISGGPPPPPPPP 765
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +1
Query: 355 PPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG P GG PPP GG PPPPPPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPP------------GGCPPPPPPP 775
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +1
Query: 355 PPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG P GG PPP GG PPPPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGG------LPPISGGPPPPPPPP 348
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = +1
Query: 355 PPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG P GG PPP GG PPPPPPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPP------------GGCPPPPPPP 358
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 34.7 bits (76), Expect = 0.083
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 465 GXAPPPPPPXXXXXGGGGG 521
G APPPPPP GGGGG
Sbjct: 28 GCAPPPPPPSPCGCGGGGG 46
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 34.7 bits (76), Expect = 0.083
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +3
Query: 465 GXAPPPPPPXXXXXGGGGG 521
G APPPPPP GGGGG
Sbjct: 28 GCAPPPPPPACGCGGGGGG 46
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 438 FFFFXXXXGGXAP-PPPPPXXXXXGGGGG 521
F F GG PPPPP GGGGG
Sbjct: 17 FLFPSGGGGGCGCAPPPPPPACGCGGGGG 45
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect(2) = 0.13
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPP 489
PPP + G P GG PPP + GG PPPPPP
Sbjct: 327 PPPPPPSRFGP-PGMGGMPPPPPPGMRY--------PGGMPPPPPP 363
Score = 21.8 bits (44), Expect(2) = 0.13
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 466 GXPPPPPPP 492
G PPPPPP
Sbjct: 389 GMIPPPPPP 397
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect(2) = 0.13
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPP 489
PPP + G P GG PPP + GG PPPPPP
Sbjct: 317 PPPPPPSRFGP-PGMGGMPPPPPPGMRY--------PGGMPPPPPP 353
Score = 21.8 bits (44), Expect(2) = 0.13
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 466 GXPPPPPPP 492
G PPPPPP
Sbjct: 379 GMIPPPPPP 387
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG APPPPPP GGGG
Sbjct: 50 GGCAPPPPPPACGGGCGGGG 69
Score = 33.5 bits (73), Expect = 0.19
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG APPPPPP GGGG
Sbjct: 107 GGCAPPPPPPACGGGCGGGG 126
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG PPPPP G GGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGG 68
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG PPPPP G GGG
Sbjct: 106 GGGCAPPPPPPACGGGCGGG 125
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 25.8 bits (54), Expect(2) = 0.26
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 349 TPPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPP 489
TP P +++ P PP F PPPPPP
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
Score = 25.8 bits (54), Expect(2) = 0.26
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 463 GGXPPPPPPP 492
G PPPPPPP
Sbjct: 806 GAPPPPPPPP 815
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 25.8 bits (54), Expect(2) = 0.26
Identities = 13/47 (27%), Positives = 16/47 (34%)
Frame = +1
Query: 349 TPPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPP 489
TP P +++ P PP F PPPPPP
Sbjct: 753 TPQPIQQQQSSIPPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPP 799
Score = 25.8 bits (54), Expect(2) = 0.26
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1
Query: 463 GGXPPPPPPP 492
G PPPPPPP
Sbjct: 806 GAPPPPPPPP 815
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PPP + G +P PPP G PPPPPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPP---MGLPAVGAGAPPPPPPP 655
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 408 PPPPXXXXFFFFFFXXXXGGXAPPPPPPXXXXXGGGGGA 524
PPPP F PPPPPP G GA
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGA 648
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 408 PPPPXXXXFFFFFFXXXXGGXAPPPPPPXXXXXGGG 515
PPPP G APPPPPP GG
Sbjct: 631 PPPPPPPPMGL----PAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.34
Identities = 16/47 (34%), Positives = 18/47 (38%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PPP + G +P PPP G PPPPPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPP---MGLPAVGAGAPPPPPPP 481
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 408 PPPPXXXXFFFFFFXXXXGGXAPPPPPPXXXXXGGGGGA 524
PPPP F PPPPPP G GA
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGA 474
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 408 PPPPXXXXFFFFFFXXXXGGXAPPPPPPXXXXXGGG 515
PPPP G APPPPPP GG
Sbjct: 457 PPPPPPPPMGL----PAVGAGAPPPPPPPPPSGAGG 488
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGGA 524
G APPPPPP G GGGA
Sbjct: 61 GYGAPPPPPPPPAFGGLGGGA 81
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 465 GXAPPPPPPXXXXXGGGGGA 524
G PPPPPP GGG A
Sbjct: 63 GAPPPPPPPPAFGGLGGGAA 82
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGGA 524
G APPPPPP G GGGA
Sbjct: 61 GYGAPPPPPPPPAFGGLGGGA 81
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 465 GXAPPPPPPXXXXXGGGGGA 524
G PPPPPP GGG A
Sbjct: 63 GAPPPPPPPPAFGGLGGGAA 82
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGGA 524
G APPPPPP G GGGA
Sbjct: 61 GYGAPPPPPPPPAFGGLGGGA 81
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 465 GXAPPPPPPXXXXXGGGGGA 524
G PPPPPP GGG A
Sbjct: 63 GAPPPPPPPPAFGGLGGGAA 82
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG +P G PPP G PPPPPPP
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPPPPLPPV-------GAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG +P G PPP G PPPPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPV-------GAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PP GG +P G PPP G PPPPPPP
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPPPPLPPV-------GAGAPPPPPPPP 240
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +3
Query: 432 FFFFFFXXXXGGX-APPPPPPXXXXXGGGGGA 524
F F GG APPPPPP GGG A
Sbjct: 16 FLFNLLGGGGGGCCAPPPPPPCGGGCGGGAPA 47
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PPP GG P P P GG PPPPPPP
Sbjct: 541 PPPVGMANGGPPP----PPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG APPP P GGGGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGG 65
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG APPP P GGGGG
Sbjct: 70 GGCAPPPAPCGGGCGGGGGG 89
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG PPP P GGGGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGGG 64
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG PPP P GGGGG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGG 88
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG APPP P GGGGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGG 65
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG APPP P GGGGG
Sbjct: 70 GGCAPPPAPCGGGCGGGGGG 89
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG PPP P GGGGG
Sbjct: 45 GGGCAPPPAPCGGGCGGGGG 64
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGGG 521
GG PPP P GGGGG
Sbjct: 69 GGGCAPPPAPCGGGCGGGGG 88
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 465 GXAPPPPPPXXXXXGGGGGA 524
G APPPP GGGGGA
Sbjct: 278 GGAPPPPSGSAMGGGGGGGA 297
>U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical
protein C42D4.3 protein.
Length = 255
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGGG 518
GG PPPPPP GGG
Sbjct: 32 GGGCPPPPPPMCSGGCGGG 50
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 465 GXAPPPPPPXXXXXGGGGGA 524
G APPPP GGGGGA
Sbjct: 172 GGAPPPPSGSAMGGGGGGGA 191
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +3
Query: 435 FFFFFXXXXGGXAPP--PPPPXXXXXGGGGGA 524
FFF G APP PPPP GGGG A
Sbjct: 17 FFFGGGSSCGCSAPPACPPPPPPSPCGGGGYA 48
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 474 PPPPPPXXXXXGGGG 518
PPPPPP GGGG
Sbjct: 511 PPPPPPQSQQAGGGG 525
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 491 GGGGGGGXPPXXXXKKKKKKXXXXXGGGXPP 399
GGGGGGG + ++ GGG PP
Sbjct: 840 GGGGGGGGGSYHQPYNQDQRRGGRGGGGGPP 870
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 349 TPPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
+PPP G P GG PPP G PPPPPPP
Sbjct: 271 SPPPPPT--GSPPPPPAGGSPPPPR-------------AGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 349 TPPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
+PPP G P GG PPP G PPPPPPP
Sbjct: 292 SPPPPPT--GSPPPPPAGGSPPPPR-------------AGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 349 TPPPXXKKKGGXSP*XGGGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
+PPP G P GG PPP G PPPPPPP
Sbjct: 277 SPPPPPT--GSPPPPPAGGSPPPPR-------------AGSPPPPPPP 309
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 474 PPPPPPXXXXXGGGGG 521
PPPPPP GGG G
Sbjct: 63 PPPPPPPPAPIGGGAG 78
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 474 PPPPPPXXXXXGGGGG 521
PPPPPP GGG G
Sbjct: 63 PPPPPPPPAPIGGGAG 78
>AC006633-3|AAK68375.1| 227|Caenorhabditis elegans Hypothetical
protein F35B3.4 protein.
Length = 227
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 462 GGXAPPPPPPXXXXXGGG 515
GG APPPPP GGG
Sbjct: 28 GGCAPPPPPVCSGGCGGG 45
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 25.0 bits (52), Expect(2) = 6.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 461 GGXXPPPPPP 490
GG PPPPPP
Sbjct: 670 GGFMPPPPPP 679
Score = 21.8 bits (44), Expect(2) = 6.1
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 473 PPPPPPL 493
PPPPPP+
Sbjct: 676 PPPPPPM 682
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 25.0 bits (52), Expect(2) = 6.1
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 461 GGXXPPPPPP 490
GG PPPPPP
Sbjct: 670 GGFMPPPPPP 679
Score = 21.8 bits (44), Expect(2) = 6.1
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 473 PPPPPPL 493
PPPPPP+
Sbjct: 676 PPPPPPM 682
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 25.8 bits (54), Expect(2) = 6.1
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 466 GXPPPPPPP 492
G PPPPPPP
Sbjct: 533 GPPPPPPPP 541
Score = 21.0 bits (42), Expect(2) = 6.1
Identities = 8/25 (32%), Positives = 10/25 (40%)
Frame = +1
Query: 562 PPPPXXXXXXXXGGGGGXXKKKKXK 636
PPPP GGG ++ K
Sbjct: 538 PPPPRSSGANGNRNGGGGNRRNNNK 562
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +1
Query: 352 PPPXXKKKGGXSP*XG--GGXPPPXXXXXFFFFFFXXXXGGXPPPPPPP 492
PPP GG P GG PPP G PPPPPPP
Sbjct: 84 PPPPPMFAGGIPPPPPMMGGIPPPPPMF------------GAPPPPPPP 120
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 463 GGXPPPPPPP 492
GG PPPPPPP
Sbjct: 587 GGPPPPPPPP 596
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 463 GGXPPPPPPP 492
GG PPPPPPP
Sbjct: 1010 GGPPPPPPPP 1019
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 463 GGXPPPPPPP 492
GG PPPPPPP
Sbjct: 249 GGPPPPPPPP 258
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 466 GXPPPPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPP 573
G PPPPPPP PPPP
Sbjct: 768 GVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 466 GXPPPPPPPXXXXXXXXXXXXXXXXXXXXXXXPPPP 573
G PPPPPPP PPPP
Sbjct: 768 GVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPP 803
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,272,664
Number of Sequences: 27780
Number of extensions: 350195
Number of successful extensions: 4297
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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