Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H11
         (974 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0146 + 26969011-26969995,26970878-26970930                       31   1.1  
03_02_0638 + 10014811-10014863,10015710-10015902                       30   2.4  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   5.6  
01_02_0045 - 10576475-10577198,10578347-10578504                       29   5.6  
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956...    29   7.4  

>01_06_0146 + 26969011-26969995,26970878-26970930
          Length = 345

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 21/53 (39%), Positives = 23/53 (43%)
 Frame = +2

Query: 731 PXHPXNPXNXXPPAXXARXXPDXXSXHHXSGXPSPXPXRPXLXXSQXXVPPPP 889
           P  P NP    PP   +   P   S +H SG PS    RP    SQ   PPPP
Sbjct: 36  PISPQNPTPPPPPLPASAAAPTTPSPNH-SGDPS----RP--IPSQAPAPPPP 81


>03_02_0638 + 10014811-10014863,10015710-10015902
          Length = 81

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 918 EXFRXXX*RRGGGGTXXWDXSXXGRXGSGDG 826
           E FR    R GGGG+  W+    G   +GDG
Sbjct: 51  ETFRLVVGRGGGGGSRTWEEWGAGNASTGDG 81


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/53 (28%), Positives = 17/53 (32%)
 Frame = +2

Query: 731 PXHPXNPXNXXPPAXXARXXPDXXSXHHXSGXPSPXPXRPXLXXSQXXVPPPP 889
           P     P    PP       P     ++ S  P P P  P L       PPPP
Sbjct: 553 PPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPP 605


>01_02_0045 - 10576475-10577198,10578347-10578504
          Length = 293

 Score = 29.1 bits (62), Expect = 5.6
 Identities = 15/44 (34%), Positives = 19/44 (43%)
 Frame = -3

Query: 894 RRGGGGTXXWDXSXXGRXGSGDGXPXXWWXXXSSGXXRAXXAGG 763
           RRGGGGT  W+ +  G   +G+     W     SG   A    G
Sbjct: 147 RRGGGGTRVWEGAALGSNSAGE-----WAAGSKSGSAAAARGAG 185


>04_04_1641 +
           34993807-34994589,34994924-34995022,34995521-34995648,
           34996095-34996235,34996456-34996542,34996627-34996780,
           34998569-34998628,34999019-34999447,34999524-34999819,
           35000278-35000407,35000690-35001187
          Length = 934

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 12/30 (40%), Positives = 13/30 (43%)
 Frame = +1

Query: 793 RRXXXPPPXRXPIPGXAPSXXXXIPXXXPP 882
           RR   PPP   P+P  AP      P   PP
Sbjct: 34  RRPSPPPPPPSPVPSPAPPPPPHRPSPSPP 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.317    0.135    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,777,976
Number of Sequences: 37544
Number of extensions: 178761
Number of successful extensions: 677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2834967080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)