Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H10
         (923 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    31   1.3  
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    29   5.2  
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174...    29   6.9  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    29   6.9  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.9  

>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 782 GGGRXSSPPXXXXXFGXGGPGGGXXGKTXXISP 684
           GGG   +PP      G GG GGG  G T   +P
Sbjct: 389 GGGGPGAPPPYHGGGGGGGGGGGGGGYTGSAAP 421


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 706 PXXPPPGPPXPKXXXXXGGEEXRPPP 783
           P  PP  PP P+     GGE  R PP
Sbjct: 11  PPPPPQHPPPPQAGGGGGGEFYRGPP 36


>09_01_0112 +
           1737438-1737777,1738441-1738511,1738974-1739052,
           1741559-1741641,1741733-1741784,1742038-1742105,
           1742279-1742345,1742426-1742505,1742576-1742640,
           1742785-1742847,1743271-1743427,1743511-1743588,
           1743677-1744219,1744321-1744497,1744534-1744788,
           1745270-1745329,1745874-1745888,1746123-1746135,
           1746819-1746934
          Length = 793

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
 Frame = -1

Query: 782 GGGRXSSPP--XXXXXFGXGGPGGGXXGKTXXISPYDG 675
           GGG   SPP        G GG GGG  G      PY G
Sbjct: 39  GGGGSGSPPHRFSRGGGGGGGDGGGGGGGGGRFHPYRG 76


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +1

Query: 706 PXXPPPGPPXPKXXXXXGGEEXRPPP 783
           P    PGPP P      G  + RPPP
Sbjct: 604 PKSTGPGPPRPPPPAMPGSSKTRPPP 629


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 706 PXXPPPGPPXPKXXXXXGGEEXRPPP 783
           P  PPP  P P      GG++  PPP
Sbjct: 354 PPPPPPKGPSPPPPPPPGGKKGGPPP 379


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,181,455
Number of Sequences: 37544
Number of extensions: 198975
Number of successful extensions: 1223
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)