BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H10
(923 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino pro... 29 6.8
BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p pro... 29 6.8
BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p pro... 29 6.8
AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein. 29 9.0
AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB... 29 9.0
AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC... 29 9.0
AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA... 29 9.0
>U34258-1|AAC46925.1| 1058|Drosophila melanogaster cappuccino
protein.
Length = 1058
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 700 VXPXXPPPGPPXPKXXXXXGGEEXRPPP 783
V P PPP PP P G PPP
Sbjct: 498 VAPPPPPPPPPPPPPLANYGAPPPPPPP 525
>BT024458-1|ABC86520.1| 1153|Drosophila melanogaster AT18380p
protein.
Length = 1153
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 700 VXPXXPPPGPPXPKXXXXXGGEEXRPPP 783
V P PPP PP P G PPP
Sbjct: 593 VAPPPPPPPPPPPPPMANYGAPPPPPPP 620
>BT021476-1|AAX33624.1| 1286|Drosophila melanogaster AT04667p
protein.
Length = 1286
Score = 29.5 bits (63), Expect = 6.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 700 VXPXXPPPGPPXPKXXXXXGGEEXRPPP 783
V P PPP PP P G PPP
Sbjct: 726 VAPPPPPPPPPPPPPMANYGAPPPPPPP 753
>AF053091-1|AAC06254.1| 2715|Drosophila melanogaster eyelid protein.
Length = 2715
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 531 GGRXFAPRSRGASPXGGPXMQDRXQPXPXARPQ 433
GG AP S A P G P QD QP P PQ
Sbjct: 1448 GGAPGAPPS-SAYPTGRPSQQDYYQPPPDQSPQ 1479
>AE014297-2398|AAN13750.1| 2716|Drosophila melanogaster CG7467-PB,
isoform B protein.
Length = 2716
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 531 GGRXFAPRSRGASPXGGPXMQDRXQPXPXARPQ 433
GG AP S A P G P QD QP P PQ
Sbjct: 1449 GGAPGAPPS-SAYPTGRPSQQDYYQPPPDQSPQ 1480
>AE014297-2397|AAS65166.1| 2556|Drosophila melanogaster CG7467-PC,
isoform C protein.
Length = 2556
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 531 GGRXFAPRSRGASPXGGPXMQDRXQPXPXARPQ 433
GG AP S A P G P QD QP P PQ
Sbjct: 1289 GGAPGAPPS-SAYPTGRPSQQDYYQPPPDQSPQ 1320
>AE014297-2396|AAF55457.1| 2703|Drosophila melanogaster CG7467-PA,
isoform A protein.
Length = 2703
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -3
Query: 531 GGRXFAPRSRGASPXGGPXMQDRXQPXPXARPQ 433
GG AP S A P G P QD QP P PQ
Sbjct: 1436 GGAPGAPPS-SAYPTGRPSQQDYYQPPPDQSPQ 1467
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,347,221
Number of Sequences: 53049
Number of extensions: 285561
Number of successful extensions: 1476
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -