Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H09
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1487 - 33919654-33920399,33920676-33920817                       31   0.97 
07_03_0893 - 22357967-22358173,22358292-22358366,22358482-22358706     30   2.3  
05_01_0493 + 4113869-4116728,4116859-4117370                           29   3.9  
01_01_0490 + 3620523-3623403,3623524-3623996                           29   3.9  
05_05_0391 - 24617389-24617508,24617854-24617919,24618156-246182...    29   6.9  

>04_04_1487 - 33919654-33920399,33920676-33920817
          Length = 295

 Score = 31.5 bits (68), Expect = 0.97
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 618 REGSESPAPPPDGGWGW 668
           R+G  +P+PP  GGWGW
Sbjct: 258 RQGECTPSPPRRGGWGW 274


>07_03_0893 - 22357967-22358173,22358292-22358366,22358482-22358706
          Length = 168

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3

Query: 558 KMSLSVSKNSKNENTEIEDSREGSESPAPPPDGG 659
           K SLS S +    +T I   +  + SPAPPP GG
Sbjct: 9   KSSLSTSLSFSCSSTRILGRKRVAVSPAPPPSGG 42


>05_01_0493 + 4113869-4116728,4116859-4117370
          Length = 1123

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 621  EGSESPAPPPDGGWGWMVVFASFMIHIVTDGMTYSFGVFI 740
            +G+ S  PP  G +G++      M  I T    YSFGV +
Sbjct: 935  DGASSSPPPFAGSYGYIAPEYGCMTKITTKSDVYSFGVVL 974


>01_01_0490 + 3620523-3623403,3623524-3623996
          Length = 1117

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 621  EGSESPAPPPDGGWGWMVVFASFMIHIVTDGMTYSFGVFI 740
            +G+ S  PP  G +G++      M  I T    YSFGV +
Sbjct: 942  DGANSSPPPFAGSYGYIAPEYGCMTKITTKSDVYSFGVVL 981


>05_05_0391 -
           24617389-24617508,24617854-24617919,24618156-24618204,
           24618855-24618922,24619041-24619086,24619187-24619280,
           24619373-24619435,24619722-24619844,24620370-24620403,
           24621106-24621168,24621447-24621545,24622398-24622454
          Length = 293

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 483 YFIFFELYCLEICFSVNVQNVFYLEC 406
           YF+ F L+CLE   S+ V  +  ++C
Sbjct: 235 YFVGFGLFCLESLLSIGVIQIMTIDC 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,694,662
Number of Sequences: 37544
Number of extensions: 391723
Number of successful extensions: 1354
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)