Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H09
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026202-6|AAB71245.2|  594|Caenorhabditis elegans Hypothetical ...    58   7e-09
U41105-12|AAA82406.1|  556|Caenorhabditis elegans Hypothetical p...    57   2e-08
Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical pr...    49   5e-06
AF125952-1|AAD14701.1|  571|Caenorhabditis elegans Hypothetical ...    46   3e-05
AC006722-7|AAK68412.2|  544|Caenorhabditis elegans Hypothetical ...    46   3e-05
U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned expre...    46   4e-05
U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned expre...    46   4e-05
U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned expre...    46   4e-05
Z78545-2|CAB01766.1|  596|Caenorhabditis elegans Hypothetical pr...    44   1e-04
L23645-1|AAK26138.1|  582|Caenorhabditis elegans Hypothetical pr...    30   2.7  
L14331-4|AAA28097.1|  352|Caenorhabditis elegans Hypothetical pr...    30   2.7  
Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF043704-5|AAK21474.1|  128|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p...    29   6.2  
Z83225-1|CAB05721.1|  324|Caenorhabditis elegans Hypothetical pr...    29   6.2  
Z81045-6|CAB02820.1|  324|Caenorhabditis elegans Hypothetical pr...    29   6.2  

>AF026202-6|AAB71245.2|  594|Caenorhabditis elegans Hypothetical
           protein C10E2.6 protein.
          Length = 594

 Score = 58.4 bits (135), Expect = 7e-09
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +3

Query: 645 PPDGGWGWMVVFASFMIHIVTDGMTYSFGVFIRS 746
           PPDGGWGW+VV  SF +H+  DG  YSFGV + +
Sbjct: 17  PPDGGWGWVVVLGSFFVHVFADGFVYSFGVLVET 50


>U41105-12|AAA82406.1|  556|Caenorhabditis elegans Hypothetical
           protein T02G5.12 protein.
          Length = 556

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 20/30 (66%), Positives = 23/30 (76%)
 Frame = +3

Query: 645 PPDGGWGWMVVFASFMIHIVTDGMTYSFGV 734
           PPDGGWGW+VV  SF IH+  DG  YSFG+
Sbjct: 14  PPDGGWGWVVVIGSFFIHVFADGFVYSFGI 43


>Z70206-2|CAA94126.2|  771|Caenorhabditis elegans Hypothetical
           protein C49F8.2 protein.
          Length = 771

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/59 (35%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +3

Query: 582 NSKNENTEIEDSREGSESPAPPPDGGWGWMVVFASFMIHIVTDGMTYSFG-VFIRSPDY 755
           ++++++++ E     +E P    DGG+GW+VV ASF++H V DG ++ FG VF++  ++
Sbjct: 46  SARSDDSDAESVESLTERPVYK-DGGYGWLVVLASFLMHAVCDGASFCFGIVFVKIQEH 103


>AF125952-1|AAD14701.1|  571|Caenorhabditis elegans Hypothetical
           protein C01B4.9 protein.
          Length = 571

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 23/63 (36%), Positives = 38/63 (60%)
 Frame = +3

Query: 543 PSECAKMSLSVSKNSKNENTEIEDSREGSESPAPPPDGGWGWMVVFASFMIHIVTDGMTY 722
           P +  K  ++V+  +  EN E +    G  +P   PDGG+GW+VV ASF++++  DG+ Y
Sbjct: 9   PLDAEKKEVTVAVTAA-ENFEEQVEEVGKVTP---PDGGYGWVVVAASFLVNMAVDGVIY 64

Query: 723 SFG 731
           + G
Sbjct: 65  TCG 67


>AC006722-7|AAK68412.2|  544|Caenorhabditis elegans Hypothetical
           protein Y19D10A.12 protein.
          Length = 544

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 23/63 (36%), Positives = 38/63 (60%)
 Frame = +3

Query: 543 PSECAKMSLSVSKNSKNENTEIEDSREGSESPAPPPDGGWGWMVVFASFMIHIVTDGMTY 722
           P +  K  ++V+  +  EN E +    G  +P   PDGG+GW+VV ASF++++  DG+ Y
Sbjct: 9   PLDAEKKEVTVAVTAA-ENFEEQVEEVGKVTP---PDGGYGWVVVAASFLVNMAVDGVIY 64

Query: 723 SFG 731
           + G
Sbjct: 65  TCG 67


>U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned
           expression site protein22, isoform c protein.
          Length = 710

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 17/33 (51%), Positives = 27/33 (81%)
 Frame = +3

Query: 648 PDGGWGWMVVFASFMIHIVTDGMTYSFGVFIRS 746
           PDGG+GW++VFA+FM ++V DG++ +F  F +S
Sbjct: 70  PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQS 102


>U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned
           expression site protein22, isoform a protein.
          Length = 677

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 17/33 (51%), Positives = 27/33 (81%)
 Frame = +3

Query: 648 PDGGWGWMVVFASFMIHIVTDGMTYSFGVFIRS 746
           PDGG+GW++VFA+FM ++V DG++ +F  F +S
Sbjct: 15  PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQS 47


>U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned
           expression site protein22, isoform b protein.
          Length = 777

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 17/33 (51%), Positives = 27/33 (81%)
 Frame = +3

Query: 648 PDGGWGWMVVFASFMIHIVTDGMTYSFGVFIRS 746
           PDGG+GW++VFA+FM ++V DG++ +F  F +S
Sbjct: 70  PDGGYGWVIVFAAFMSNLVVDGISTAFSEFKQS 102


>Z78545-2|CAB01766.1|  596|Caenorhabditis elegans Hypothetical
           protein M03B6.2 protein.
          Length = 596

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 14/33 (42%), Positives = 26/33 (78%)
 Frame = +3

Query: 645 PPDGGWGWMVVFASFMIHIVTDGMTYSFGVFIR 743
           PPDGG+GW +V ASF+++++ DG+ ++ G  ++
Sbjct: 33  PPDGGYGWAIVAASFLLNMIVDGVIFTVGKILQ 65


>L23645-1|AAK26138.1|  582|Caenorhabditis elegans Hypothetical
           protein F54F2.5a protein.
          Length = 582

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -2

Query: 234 YISLSC*XLQFRRYDTVRFNSVGNEIY*HDIKNCFHCGMTKKTTQDFE 91
           Y  L C    F  Y   R   + N+      KNCF+CG  +K T D +
Sbjct: 213 YACLKCPHSVFNAYHAARHVEMHNDFP----KNCFYCGEIRKGTVDLQ 256


>L14331-4|AAA28097.1|  352|Caenorhabditis elegans Hypothetical
           protein K12H4.3 protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +1

Query: 439 RETYLQTI*FEENKITKIITHLENRLYLIKNHYNCLRSVPKCL---*AFQRIPRMKTLR* 609
           ++TYL     E+    K + H  + +  +K   NCLR+    L    AF + P++K ++ 
Sbjct: 127 KDTYLWMSNVEKGPSIKFLVHNVHTMKELKMSGNCLRASRPVLSFDDAFDKKPQLKLIK- 185

Query: 610 KIREKALKVPRHH 648
            +  + L  P HH
Sbjct: 186 AVLMQTLGTPHHH 198


>Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical
           protein K09A9.3 protein.
          Length = 450

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 21/72 (29%), Positives = 35/72 (48%)
 Frame = +3

Query: 561 MSLSVSKNSKNENTEIEDSREGSESPAPPPDGGWGWMVVFASFMIHIVTDGMTYSFGVFI 740
           MS +V     NE  ++ED+    E+P P   G     +VF   ++H +   M ++  + I
Sbjct: 1   MSAAVELQPLNEAKKVEDAEVEEETPEPEDKGN----LVFYIILLHGIGTLMPWNMLITI 56

Query: 741 RSPDYSEVLQMV 776
            S DY E  +M+
Sbjct: 57  -SYDYFESYKML 67


>AF043704-5|AAK21474.1|  128|Caenorhabditis elegans Hypothetical
           protein W01B11.1 protein.
          Length = 128

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
 Frame = +3

Query: 543 PSECAKMSLSVSKNS-------KNENTEIEDSREGSESPAPPPD-GGWGWMVVFASFMIH 698
           P++ A  S S SK+S       K + T+     +  ES  PPP    + W + F++F++ 
Sbjct: 54  PAKKASKSKSKSKDSSPSNGKEKKKRTKRSGGSKSKESSEPPPSLSAFKWQMAFSAFLVF 113

Query: 699 I 701
           I
Sbjct: 114 I 114


>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
           protein Y41E3.9 protein.
          Length = 1440

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 573 VSKNSKNE-NTEIEDSREGSESPAPPPDGGWGWMVVFASFM 692
           +SK+ K    T+ E+  +  E+P+PP +    W+  F +F+
Sbjct: 393 ISKSKKPVVATKPEEDMDSEETPSPPEEESATWLTTFEAFL 433


>Z83225-1|CAB05721.1|  324|Caenorhabditis elegans Hypothetical
           protein F42H11.1 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 576 SKNSKNENTEIEDSREGSESPAPPPDG 656
           S +SK +  +  D REGSE+  P P G
Sbjct: 42  SLSSKKDGAKTPDGREGSEAGTPSPGG 68


>Z81045-6|CAB02820.1|  324|Caenorhabditis elegans Hypothetical
           protein F42H11.1 protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +3

Query: 576 SKNSKNENTEIEDSREGSESPAPPPDG 656
           S +SK +  +  D REGSE+  P P G
Sbjct: 42  SLSSKKDGAKTPDGREGSEAGTPSPGG 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,996,497
Number of Sequences: 27780
Number of extensions: 340624
Number of successful extensions: 1162
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)