Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H09
         (922 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.9  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    23   5.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   9.0  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    22   9.0  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   9.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 33  P*AFESKGXPARARTLAEFTQNLVSFFLSYRSENN 137
           P  ++  G     RT A F   +V+  + YR++NN
Sbjct: 230 PRLYDLLGYVMPDRTFAPFFTRVVTDTIKYRNDNN 264



 Score = 22.2 bits (45), Expect = 6.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 678 FASFMIHIVTDGMTYSFGVFIRSPDYSEVL 767
           FA F   +VTD + Y     I  PD+  +L
Sbjct: 245 FAPFFTRVVTDTIKYRNDNNIVRPDFINML 274


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 663 GWMVVFASFMIHIVTDGMTYSFGV 734
           GW     +   HI+  G+ Y FG+
Sbjct: 45  GWFKAIGTCGSHIIIVGLFYEFGL 68


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 65  ARSDAGRVHSKSCVVFFVIPQ 127
           ARS AG VHS+   V  V+ Q
Sbjct: 83  ARSPAGSVHSRDVNVRAVVAQ 103


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +1

Query: 73  GRWPSSLKILCRFFC 117
           G+WP + ++ C  +C
Sbjct: 61  GQWPETRQLKCYMYC 75


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 469 EENKITKIITHLENRLYLIKNHYN 540
           E +K  KII+ L N      N+YN
Sbjct: 296 ERSKEPKIISSLSNSCNYSNNYYN 319


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 469 EENKITKIITHLENRLYLIKNHYN 540
           E +K  KII+ L N+     N+YN
Sbjct: 296 ERSKEPKIISSLSNKTIHNNNNYN 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,539
Number of Sequences: 438
Number of extensions: 4506
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)