Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H08
(759 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.10
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.31
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.72
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 2.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.7
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 8.9
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 25 8.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.006
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPPP 597
PPPP P P P P PPPP PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 35.1 bits (77), Expect = 0.011
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 462 PPPPPFXXXXXPPPPPPXXXKXXXFXXXPPPP 557
PPP P PPPPPP PPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.019
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 462 PPPPPFXXXXXPPPPPPXXXKXXXFXXXPPPP 557
P PPP PPPPPP PPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.5 bits (73), Expect = 0.033
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPPP 597
PP P PPPPPP PPPP + P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 30.7 bits (66), Expect = 0.24
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +2
Query: 452 GGXTPPPPXXXV--XXPPPPPP 511
GG PPPP V PPPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.5 bits (63), Expect = 0.54
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 462 PPPPPFXXXXXPPPPPPXXXKXXXFXXXPPPPXXKKXXXFXXSPP 596
PPPPP P P P PPPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 460 PPPXXXXKXXXPPPPPXGXXPXXXXPXXXP 371
PPP PPPPP G P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = +2
Query: 461 TPPPPXXXVXXPPPPP---PXXXKXXXXFXXPPPP 556
+PPPP V P P P P PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 475 GGGGGPPPXXXXKXXXPPPPP 413
GG PPP PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPP 779
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.10
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 462 PPPPPFXXXXXPPPPPP 512
PPPP F PPPPPP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
Score = 31.5 bits (68), Expect = 0.13
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPP 513
PPPP F PPPPPP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
Score = 30.3 bits (65), Expect = 0.31
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 493 PPPPPPPXXXXXXXFXXPPPP 555
PPPPPPP PPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 30.3 bits (65), Expect = 0.31
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 493 PPPPPPPXXXXXXXFXXPPPPXXKK 567
PPPPPPP PPPP K
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVK 34
Score = 28.7 bits (61), Expect = 0.95
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 462 PPPPPFXXXXXPPPPPP 512
PPPPP PPPPP
Sbjct: 12 PPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 426 PPPPPGGXXPPXFXPXXP 373
PPPPP G PP P P
Sbjct: 11 PPPPPPGFEPPSQPPPPP 28
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 495 PPPPPPXXXKXXXFXXXPPPPXXKK 569
PPPPPP PPP KK
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -3
Query: 460 PPPXXXXKXXXPPPPPXG 407
PPP PPPPP G
Sbjct: 14 PPPGFEPPSQPPPPPPPG 31
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.31
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 250
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 263
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 276
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 289
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 302
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 315
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 328
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPPPXXKKXXXFFXPPP 594
PPPP PPPP PPPP + PPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHM-PPPPMHHEPGEHMPPPP 341
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.72
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 461 TPPPPXXXVXXPPPPPPXXXKXXXXFXXPPPP 556
TPPPP V PP PP PPPP
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPP---SAPPPP 1734
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 463 PPPPXFXCXXPPPPPPPXXXXXXXFXXPPP 552
PPPP PPPP P PPP
Sbjct: 1707 PPPPPMSV--PPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 426 PPPPPGGXXPPXFXPXXPXXNP 361
PPPPP PP P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPP 1728
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.8 bits (49), Expect(2) = 2.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 493 PPPPPPP 513
PPPPPPP
Sbjct: 238 PPPPPPP 244
Score = 21.8 bits (44), Expect(2) = 2.2
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 469 PPXFXCXXPPPPPP 510
P + PPPPPP
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 2.9
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = -3
Query: 595 GGEXXKXXXFFXXGG-GGXXKXXXXFXXXGGGGGGXXXXXXGGGGGP 458
GG F GG GG GGG GG G GGGP
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -3
Query: 508 GGGGGXXXXXXGGGGGPPP 452
G GG GG GGPPP
Sbjct: 184 GHNGGGFGGFGGGSGGPPP 202
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 553 GGGXXKXXXXFXXXGGGGGGXXXXXXGGGGGP 458
GGG GGG GG G GGGP
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +2
Query: 464 PPPPXXXVXXPPPPPPXXXKXXXXFXXPPPPXXKKXXXFXXLPP 595
PPPP PP PPPP LPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/81 (23%), Positives = 19/81 (23%), Gaps = 1/81 (1%)
Frame = +3
Query: 318 PPPPXFFFFXXXXPXGXXGXXXGKXXXGXXPXGGGGGXX-FXXXXXGGGPPPPPFXXXXX 494
PPPP P G P G PPPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 495 PPPPPPXXXKXXXFXXXPPPP 557
PPP PPP
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPP 393
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 493 PPPPPPPXXXXXXXFXXPPPPXXK 564
PPPPPPP P P K
Sbjct: 308 PPPPPPPSNDFWKDSNEPAPADNK 331
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +1
Query: 460 DPPPPXFXCXXPPPPPPPXXXXXXXFXXPPPP 555
+P PP PPP PP PPP
Sbjct: 96 NPMPPMSQAYRPPPTEPPTVPAYETSSEFPPP 127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,947,514
Number of Sequences: 5004
Number of extensions: 39433
Number of successful extensions: 459
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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