Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H06
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 33 0.28
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.5
U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen prote... 30 1.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.4
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 3.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.4
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 3.4
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 3.4
Z74032-9|CAA98464.2| 80|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.9
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 5.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.9
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 5.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.8
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 7.8
U23527-4|AAC46574.1| 210|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 7.8
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 890 GXGGGSXGXWXNTPFWGGAPSPGGKTPXGFWGEAPFXQXGXG 765
G GG G W N WGG+ GG+ G WG + G G
Sbjct: 692 GWGGNGGGGWGNNDPWGGSRWGGGR---GGWGGGGWGGGGWG 730
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.5 bits (68), Expect = 0.84
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -1
Query: 890 GXGGGSXGXWXNTPFWGGAPSPGGKTPXGFWGE 792
G GGG G +PF G APSP F G+
Sbjct: 495 GFGGGGGGFGSGSPFGGAAPSPPSGPDPDFGGD 527
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -1
Query: 890 GXGGGSXGX--WXNTPFWGGAPSPGGKTPXGFWGEAPFXQXGXGGG 759
G GGGS G + P GG GG + G + AP G GGG
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGG 215
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -1
Query: 890 GXGGGSXGX--WXNTPFWGGAPSPGGKTPXGFWGEAPFXQXGXGGG 759
G GGGS G + P GG GG + G + AP G GGG
Sbjct: 170 GCGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGG 215
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 890 GXGGGSXGXWXNTPFWGGAPSPGGKTPXGFWGEAPFXQXGXGGG 759
G GGG G W GG GG G WG G GGG
Sbjct: 95 GRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWG----GNNGGGGG 134
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = -1
Query: 890 GXGGGSXGXWXNTPFWGGAPSPGG--KTPXGFWGEAPFXQXGXGGG 759
G G G G W WGG PGG G WG G GG
Sbjct: 26 GGGPGRWGGWGGNR-WGGGGGPGGWGNNGGGGWGRGGGRGGGDWGG 70
>U29244-13|AAC71083.1| 291|Caenorhabditis elegans Collagen protein
74 protein.
Length = 291
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQ 846
P P + GASP NP G FP G PPQ
Sbjct: 39 PTPHGGFPGGASPMNP-GSFPGVVGVPPQ 66
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGA---PPQKGVFXHXPXDPPPXP 891
PP P G P P G PP G PP G PPP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +1
Query: 760 PPPX--PXWXKGASPQNPXGVFPP-GEGAPPQKGVFXHXPXDPPPXP 891
PPP P G P P G PP G PP P PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVF 858
PPP P P P G F G PP G+F
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGA---PPQKGVFXHXPXDPPPXP 891
PP P G P P G PP G PP G PPP P
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +1
Query: 760 PPPX--PXWXKGASPQNPXGVFPP-GEGAPPQKGVFXHXPXDPPPXP 891
PPP P G P P G PP G PP P PPP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVF 858
PPP P P P G F G PP G+F
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PP P G +P N G PP PP V P PPP P
Sbjct: 215 PPAPPPPIGGIAPVNAHGAPPP----PPLPPVGAGAPPPPPPPP 254
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGA---PPQKGVFXHXPXDPPPXP 891
PP P G P P G PP G PP G PPP P
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +1
Query: 760 PPPX--PXWXKGASPQNPXGVFPP-GEGAPPQKGVFXHXPXDPPPXP 891
PPP P G P P G PP G PP P PPP P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVF 858
PPP P P P G F G PP G+F
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PP P G +P N G PP PP V P PPP P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPP----PPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PP P G +P N G PP PP V P PPP P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAPPP----PPLPPVGAGAPPPPPPPP 240
>Z74032-9|CAA98464.2| 80|Caenorhabditis elegans Hypothetical
protein F35B12.7 protein.
Length = 80
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 890 GXGGGSXGXWXNTPFWGGAPSPGGKTPXGFWGEAPFXQXGXGG 762
G GGG G + +GG GG+ P G+ G P+ G G
Sbjct: 37 GYGGGRYGGYGGRGPYGGY---GGRGPYGYGGRGPYGGGGLVG 76
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PPP P PQN G PP PP G P PPP P
Sbjct: 561 PPPPPP----PLPQNLSGAPPPPPPPPPMLG----GPPPPPPPP 596
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PPP P P P P PP G++ P PPP P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW---PPPPPPPP 304
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PPP P A P G++PP + P H PPP P
Sbjct: 348 PPPPPPRYPSAGP----GMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +1
Query: 763 PPXPXWXKGASPQ-NPXGVFPPGEGAPPQKG 852
PP P GA P P G+F P GAPP G
Sbjct: 151 PPGPFDPSGAPPSGGPPGLFDP-SGAPPSGG 180
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PPP P P P P PP G++ P PPP P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW---PPPPPPPP 314
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PPP P A P G++PP + P H PPP P
Sbjct: 358 PPPPPPRYPSAGP----GMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +1
Query: 766 PXPXWXKGASPQNPXGVFPPGEGAPPQKGV--FXHXPXDPPP 885
P P G P P PPG G PP +G+ P PPP
Sbjct: 707 PPPPGIPGYPPAPP----PPGVGPPPPQGIPPMGFDPNKPPP 744
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 760 PPPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPPXP 891
PPP P G +P + PP PP G+ P PPP P
Sbjct: 520 PPPPPM--PGMAPLSTGAPTPP---PPPPVGMANGGPPPPPPLP 558
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = -1
Query: 890 GXGGGSXGXWXNTPFWGGAPSPGGKTPXGFWGEAPFXQXGXGGG 759
G GGG G W N GG + GG G G G GGG
Sbjct: 63 GWGGGRGGGWGNN---GGGGNWGGNGGGGNGGGGRGGGGGGGGG 103
>U23527-4|AAC46574.1| 210|Caenorhabditis elegans Hypothetical
protein K09E2.3 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 833 PSPGGKTPXGFWGEAPFXQXGXG 765
P+ G K P G+W PF G G
Sbjct: 148 PASGAKLPIGYWHSVPFPIPGAG 170
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 763 PPXPXWXKGASPQNPXGVFPPGEGAPPQKGVFXHXPXDPPP 885
P P G P P G PG PPQ G P PPP
Sbjct: 400 PQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGP--PPP 438
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,178,157
Number of Sequences: 27780
Number of extensions: 199850
Number of successful extensions: 1132
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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