Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H04
(926 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1276 - 28907726-28907842,28908012-28908062,28908146-289082... 187 1e-47
02_01_0356 + 2563773-2563898,2564031-2564131,2564375-2564498,256... 175 4e-44
09_02_0460 + 9567656-9567766,9567849-9567949,9568527-9568647,956... 128 6e-30
07_01_0071 - 522920-523063,524125-524212,524289-524677 31 0.98
07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146 30 2.3
06_03_1248 + 28685911-28687719 29 4.0
03_06_0010 + 30990002-30990273,30990372-30990488,30990581-309906... 29 6.9
11_04_0450 - 17847676-17847841,17848024-17848131,17848223-178483... 28 9.2
02_05_0562 - 29970207-29970224,29970290-29970364,29971083-299714... 28 9.2
>06_03_1276 -
28907726-28907842,28908012-28908062,28908146-28908254,
28908345-28908430,28908537-28908650,28908731-28908790,
28909088-28909303,28909401-28909514,28910632-28910853,
28910946-28911050,28911136-28911276,28911368-28911472,
28911538-28911645,28911753-28911911,28912060-28912140,
28912219-28912330,28912433-28912515,28912631-28912669,
28913061-28913126,28913601-28913643,28913969-28914036,
28914264-28914323,28914409-28914529,28915167-28915267,
28915354-28915494
Length = 873
Score = 187 bits (456), Expect = 1e-47
Identities = 93/248 (37%), Positives = 155/248 (62%), Gaps = 15/248 (6%)
Frame = +3
Query: 111 REHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGD 290
R HY LK +E + + KK+ AD++SVLA+ T+ +RE L Y ++G+ ++G
Sbjct: 102 RPHYGTLKAYFETMPESDLKKYMADILSVLAL----TMSAEGERESLNYRMIGSEGDIGS 157
Query: 291 WGHEYVRQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRL 455
WGHEYVR L GEIA+E+ DSL LV +++F MKH+AE +A DLLME+++L
Sbjct: 158 WGHEYVRNLAGEIAQEFQKRQDDGMPTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKL 217
Query: 456 DLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQILQGVLDTYLRFGEYPRAMLVAMQLHE 635
DLL +H+D +NY R CLYL + Y+ P+ L+ + Y++FG++ A+ +A+ L++
Sbjct: 218 DLLVKHVDSTNYKRTCLYLTSSSKYLPAPDDMSALKIAFEIYMKFGDFANALRIALLLYD 277
Query: 636 KA-KCEEVFNACNDPLIKKQLCYLLARQYIPLEVDD---------EDLRTILLNAHINDH 785
K+ + + +F A +D +KKQ +++AR + +E+DD E L+ I+ N +++
Sbjct: 278 KSLELKPIFTATDDFQLKKQFAFIIARHGLSIEIDDDIAADENEKEALQDIISNIKLSEG 337
Query: 786 FLSLAREL 809
+L+LAR++
Sbjct: 338 YLTLARDI 345
>02_01_0356 +
2563773-2563898,2564031-2564131,2564375-2564498,
2564592-2564651,2564762-2564829,2565520-2565562,
2566026-2566091,2566237-2566275,2566375-2566457,
2566654-2566765,2566840-2566923,2567026-2567184,
2567268-2567372,2567451-2567555,2567661-2567801,
2567920-2568024,2568111-2568335,2568762-2568875,
2568963-2569178,2569674-2569733,2569827-2569940,
2570047-2570132,2570211-2570319,2570408-2570586,
2570673-2570741,2570792-2571005
Length = 968
Score = 175 bits (426), Expect = 4e-44
Identities = 93/250 (37%), Positives = 152/250 (60%), Gaps = 17/250 (6%)
Frame = +3
Query: 111 REHYPALKQVYEKITDEKT-KKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVG 287
R HY LK +E + + K++ AD++SVLA+ T+ +RE LKY LLG+ ++G
Sbjct: 97 RPHYGTLKSYFETMPESSDLKRYMADILSVLAL----TMSAEGERESLKYRLLGSEGDIG 152
Query: 288 DWGHEYVRQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDR 452
WGHEYVR L GEIA+E+ +D+L+ LV+ +++F MKH+AE +A DLLME++
Sbjct: 153 SWGHEYVRNLAGEIAQEFQKRQDDDMPIDALMELVQQIVSFHMKHNAEPEAVDLLMEVED 212
Query: 453 LDLLTQHMDQSNYPRVCLYLIGCASYVVEPESTQILQGVLDTYLRFGEYPRAMLVAMQLH 632
LDLL +H+D +NY R CLYL + Y+ P+ L Y++F + A+ +A+ L
Sbjct: 213 LDLLVEHVDSTNYKRTCLYLTSSSKYLPAPDDMLALDIAYTIYMKFEDLTSALRIALLLD 272
Query: 633 EKAK--CEEVFNACNDPLIKKQLCYLLARQYIPLEVDD---------EDLRTILLNAHIN 779
K+ ++V+ A D +KKQ +++AR + +E+DD E L+ I+ N+ ++
Sbjct: 273 NKSMQYVKQVYTATEDLQLKKQFSFIIARHGLAMEIDDEIAADGNDKEGLQEIVNNSKLS 332
Query: 780 DHFLSLAREL 809
+ +L+LAR++
Sbjct: 333 EGYLTLARDI 342
>09_02_0460 +
9567656-9567766,9567849-9567949,9568527-9568647,
9568733-9568792,9569022-9569089,9569469-9569535,
9569586-9569666,9570152-9570217,9570372-9570410,
9570527-9570609,9570712-9570823,9570902-9570982,
9571132-9571290,9571397-9571504,9571570-9571674,
9571765-9571905,9572007-9572147,9572205-9572426,
9573617-9573730,9573830-9574045,9574373-9574432,
9574513-9574626,9574735-9574820,9574904-9575012,
9575099-9575277,9575357-9575429
Length = 938
Score = 128 bits (309), Expect = 6e-30
Identities = 65/182 (35%), Positives = 113/182 (62%), Gaps = 15/182 (8%)
Frame = +3
Query: 309 RQLEGEIAEEWNIEN-----MDSLLPLVRDVITFDMKHSAEIQACDLLMEIDRLDLLTQH 473
R L GEIA+E+ DSL LV +++F MKH+AE +A DLLME+++LDLL +H
Sbjct: 189 RNLAGEIAQEFQKRQDDGMTTDSLKELVEQIVSFHMKHNAEPEAVDLLMEVEKLDLLVKH 248
Query: 474 MDQSNYPRVCLYLIGCASYVVEPESTQILQGVLDTYLRFGEYPRAMLVAMQLHEKA-KCE 650
+D +NY R CLYL + Y+ P+ L+ + Y++FG++ A+ +A+ L +K+ + +
Sbjct: 249 VDSTNYKRTCLYLTSSSKYLPAPDDMSALKIAFEIYMKFGDFANALRIALLLDDKSLELK 308
Query: 651 EVFNACNDPLIKKQLCYLLARQYIPLEVDD---------EDLRTILLNAHINDHFLSLAR 803
++F A +D +KKQ +++AR + ++DD E L+ I+ N +++ +L+LAR
Sbjct: 309 QIFTATDDFHLKKQFAFIIARHGLSTDIDDDIAADENEKEALQDIISNIKLSEGYLTLAR 368
Query: 804 EL 809
++
Sbjct: 369 DI 370
Score = 66.1 bits (154), Expect = 4e-11
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +3
Query: 111 REHYPALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVGD 290
R HY LK +E + + + KK+ AD++SVLA+ T+ +RE LKY ++G+ ++G
Sbjct: 92 RPHYGILKAYFETMPESELKKYMADILSVLAL----TMSAEGERESLKYRMIGSEGDIGS 147
Query: 291 WGHEYVRQLEGEIAEEWNI 347
WGHEYVR L EI E+++
Sbjct: 148 WGHEYVR-LYLEITLEFSV 165
>07_01_0071 - 522920-523063,524125-524212,524289-524677
Length = 206
Score = 31.5 bits (68), Expect = 0.98
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 204 MGVSGTLEVAEKRECLKYCLLGTLSNVGDWG-HEYVRQLEGEIAEE 338
M V L+V + KYCLLG LS W H+ +R+LE + E+
Sbjct: 123 MVVPDALKVLRLQPGHKYCLLGQLSKEVGWNYHDTIRELEEKRKEK 168
>07_03_1278 - 25413432-25413652,25413678-25413769,25413944-25414146
Length = 171
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = -2
Query: 331 AISPSNCLTYSCPQSPTFDNVPRRQYFKHSLFSATSRVPLTPIAKTEITSAQNFFVFSSV 152
A+ L PQ P F VP R ++ TS PL P++ E NF
Sbjct: 46 AVGGGGVLPPQAPQPPRF-GVPPRFQVSEAMEEQTSSEPLDPLSHEEFLHMSNFVSSLYA 104
Query: 151 IFSYT 137
+ S+T
Sbjct: 105 VNSFT 109
>06_03_1248 + 28685911-28687719
Length = 602
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 349 SIFHSSAISPSNC-LTYSCPQSPTFDNVPRRQYFKHSLFSATSRVPLTP 206
S+ SS+ SPS+ L S P S PRR K SA S P+TP
Sbjct: 58 SLHSSSSSSPSSSSLLSSSPSSKGTGTTPRRSADKAPSASAASSRPITP 106
>03_06_0010 +
30990002-30990273,30990372-30990488,30990581-30990668,
30991505-30991648
Length = 206
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 204 MGVSGTLEVAEKRECLKYCLLGTLSNVGDWG-HEYVRQLEGEIAEE 338
M + L+V + KYCLLG LS W ++ +R+LE + E+
Sbjct: 123 MVIPDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIRELEEKRKEK 168
>11_04_0450 -
17847676-17847841,17848024-17848131,17848223-17848377,
17848471-17848560,17848650-17848748,17848862-17848928,
17849028-17849124,17849357-17849492,17849579-17849634,
17849718-17849801,17849909-17850125
Length = 424
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 126 ALKQVYEKITDEKTKKFCADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNV-GDWG 296
A+ Y + +K + + + +V + + L KR CL +CL ++ V WG
Sbjct: 283 AVAYYYHGLVLDKGNEASSHISAVCCLSAADDLVADSKRACLSFCLANPITRVPPPWG 340
>02_05_0562 -
29970207-29970224,29970290-29970364,29971083-29971441,
29971572-29971713,29971906-29972025,29972139-29972216,
29972330-29972429,29972522-29972571,29972827-29972904,
29973624-29973751,29973776-29973977,29974045-29974144,
29974236-29974551,29974645-29974690,29975526-29975622,
29977254-29977258,29977643-29977708,29978631-29978690,
29979167-29979272,29979513-29979658,29980731-29980813,
29980951-29981056,29996243-29996266,29996378-29996438,
29996467-29996750,29996914-29997096
Length = 1010
Score = 28.3 bits (60), Expect = 9.2
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +3
Query: 177 CADVISVLAMGVSGTLEVAEKRECLKYCLLGTLSNVG-DWGHEYVRQLEGEIAEEWNIEN 353
C + I + + G LEV + ++ + D+ Y+ + ++A E I N
Sbjct: 269 CLEYIKYIILPWFGNLEVVQNEWNGSTKTFVSMEELSVDYERGYLNSADVKMALEKAINN 328
Query: 354 MDSLLPLVRDVITFDMKHSAEIQACDLLMEI--DRLDLLTQHMDQSNYPRVCLYLIGCAS 527
+L VRD + + K A I AC L EI D L + Q+ + ++ R L G S
Sbjct: 329 ---ILEPVRDYFSGNTKAQALIMACQLQNEITGDVLKIQMQNKEMRHH-RQRLRDSGATS 384
Query: 528 YVV 536
Y++
Sbjct: 385 YLL 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,244,138
Number of Sequences: 37544
Number of extensions: 390596
Number of successful extensions: 846
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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