Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_H03
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1751 - 29215074-29216270                                         28   8.9  
07_01_0862 - 7172083-7172931                                           28   8.9  
07_01_0080 + 587674-588510                                             28   8.9  
06_02_0126 + 12130409-12130532,12131015-12131373                       28   8.9  
01_01_0082 + 625198-625719                                             28   8.9  

>07_03_1751 - 29215074-29216270
          Length = 398

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 26/89 (29%), Positives = 26/89 (29%)
 Frame = -2

Query: 726 GGVFXXXXXXXXXXFXGXXXXXGGGGFFXXXKXGGXPXXFFXGGXXGGXKKXGXXPXKKX 547
           GG F            G     G GG F   K GG       GG  GG K  G       
Sbjct: 290 GGGFGGGKGGGFGGGGGGGGGAGAGGGFGGGKGGG------FGGGFGGGKGGGVGGGAGG 343

Query: 546 XXGGXKXXXXXKKKXGGXXXXFKGGKRGG 460
             GG           GG    F GG  GG
Sbjct: 344 GFGGGGGAGAGGGFGGGKGGGFGGGVGGG 372


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 25/88 (28%), Positives = 25/88 (28%), Gaps = 1/88 (1%)
 Frame = +2

Query: 473 PPLXXXXXPPXFFXKXFXXFXPPKXFFFXGXXPFFFXPPXXPPXKKXXGXPPFLXXXKXP 652
           PP      PP    K    F PP              P   PP KK    PP L   K P
Sbjct: 127 PPPPPPPPPPTAEEKKLLLFPPP----LPPRKKAMLFPLPLPPRKKPLLYPPPLPPKKKP 182

Query: 653 -PPPFXXXXPXKXXXXXXXFXXKTPPPK 733
            PPP     P               PPK
Sbjct: 183 LPPPSPPPQPPLPEKENTPLPPLLLPPK 210


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 13/34 (38%), Positives = 13/34 (38%)
 Frame = +2

Query: 560 GXXPFFFXPPXXPPXKKXXGXPPFLXXXKXPPPP 661
           G    F  PP  PP     G PP       PPPP
Sbjct: 83  GGDGMFRRPPPPPPPPPSSGSPPPPPPPPPPPPP 116


>06_02_0126 + 12130409-12130532,12131015-12131373
          Length = 160

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/49 (30%), Positives = 18/49 (36%)
 Frame = -2

Query: 729 GGGVFXXXXXXXXXXFXGXXXXXGGGGFFXXXKXGGXPXXFFXGGXXGG 583
           GGG +          + G     GGGG       GG P   + GG  GG
Sbjct: 109 GGGGYGGYGGYGGGGYEGYGRGYGGGGGGGGYGGGGYPGGGYYGGGGGG 157


>01_01_0082 + 625198-625719
          Length = 173

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/42 (28%), Positives = 17/42 (40%)
 Frame = +2

Query: 539 PKXFFFXGXXPFFFXPPXXPPXKKXXGXPPFLXXXKXPPPPF 664
           P   ++    P ++ PP  PP       PP       PPPP+
Sbjct: 60  PTPVYYPPPPPVYYPPPSPPPVAY---PPPTTPSTNCPPPPY 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,137,295
Number of Sequences: 37544
Number of extensions: 262525
Number of successful extensions: 435
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)