Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_H02
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0010 + 9574265-9574524,9574629-9574956,9576663-9576788,957... 34 0.14
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 33 0.42
07_03_0179 + 14801037-14801108,14801325-14802788 31 0.96
05_07_0216 + 28461783-28461788,28461837-28462295,28463198-284633... 31 1.3
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 30 2.2
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 29 5.1
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 29 6.8
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744... 29 6.8
02_02_0629 + 12386214-12386533,12386666-12386749,12386834-123869... 29 6.8
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 28 9.0
04_04_0871 + 28898262-28898534,28899552-28900015,28900242-289003... 28 9.0
>10_06_0010 +
9574265-9574524,9574629-9574956,9576663-9576788,
9576948-9577067,9577350-9577562,9577653-9577764,
9578033-9578217,9578310-9578660,9578826-9579383
Length = 750
Score = 34.3 bits (75), Expect = 0.14
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 79 IGFFQKVSYNNCFTVQQFYNKMSDLPYGAPVRISPLIKFGRWSFLTVGVLY---GAFHQN 249
+GF ++S T Q+FY + D P+G + +S L+K GR G+ Y G FH+
Sbjct: 314 LGFDDEISCAFVQTPQKFYGALKDDPFGNQLEVS-LMKVGRGIAGLQGIFYCGTGCFHRR 372
Query: 250 RL 255
++
Sbjct: 373 KV 374
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Frame = +1
Query: 214 TVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-------ALEE 372
TVG + + ++ +S ++ KL +E +E++I++ + ++EKE + LE+ AL+E
Sbjct: 498 TVGTVLPS--EDSVSDRKRKLEFLEMQEELIKEEEKRQEKEDKAKLEVPKATEEDVALKE 555
Query: 373 MASGTAKK*KD 405
M TA++ K+
Sbjct: 556 MTEPTAREEKE 566
>07_03_0179 + 14801037-14801108,14801325-14802788
Length = 511
Score = 31.5 bits (68), Expect = 0.96
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 145 SDLPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKE-AKLREIEAKEKVIRDAKL 321
+DLP AP+ + PL R++FL V ++LSK+E A+L + K + + L
Sbjct: 389 TDLPSRAPIELKPLPSGLRYAFLNGDVESPVIISDKLSKEETARLIAVLEKHRAVFGYSL 448
Query: 322 KEEK 333
++ K
Sbjct: 449 QDLK 452
>05_07_0216 +
28461783-28461788,28461837-28462295,28463198-28463315,
28463350-28463609,28465220-28465525
Length = 382
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 195 WTLVLPHRRSSIRRLPPEQAIKERSETTRD*SQREGHPRCQAEGGERKSL 344
WT +L ++++RRL + +R T + SQ+ H + E K L
Sbjct: 139 WTFLLREIKAAVRRLQELRGEPKRRHTNQQLSQKRNHQKWNTNADEEKKL 188
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 30.3 bits (65), Expect = 2.2
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +1
Query: 124 QQFYN-KMSDLPYGAPVRISPLIKFGRWSFLTVGVL--YGAFH--QNRLSKKEAKLREIE 288
QQF++ K S LP A I R V L G+ + R KEA R E
Sbjct: 1065 QQFHSEKSSSLPKSAEGHIPSSADISRKETPGVQRLKEQGSLRTEREREKDKEASRRLEE 1124
Query: 289 AKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 417
KE RD K ++E+E A E K LEE ++ KD++ +
Sbjct: 1125 TKE---RDKKFEKEREIAEERERKKLEEQERERERE-KDRLAV 1163
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +1
Query: 244 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKA 363
+ R+ +++A+ REI K++ R+ ++EE+ER +E +A
Sbjct: 484 RQRVLEEQARAREIVRKQEEERERLIREEEERQRLVEEEA 523
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 259 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 417
KKE K ++ +AKE + EE+ER+S + +K K+K+V+
Sbjct: 28 KKEKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPAPAAKKAKKEKTKEKVVV 80
>05_04_0209 -
19073147-19074041,19074117-19074163,19074258-19074437,
19074839-19074955,19075105-19075227,19075391-19075776,
19076177-19076303,19077140-19077202,19078035-19078086,
19078189-19080023
Length = 1274
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +1
Query: 247 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 354
+ + KK + + A +++ D KLKEEK + + LE
Sbjct: 816 DEIDKKVTLMSNVTAINQMLEDIKLKEEKTKQAVLE 851
>02_02_0629 +
12386214-12386533,12386666-12386749,12386834-12386972,
12387990-12388061,12388158-12388252,12388397-12388483,
12388554-12388629,12388738-12389031,12389526-12389665,
12389751-12389939,12390028-12390118,12390206-12390332,
12391146-12391253,12391343-12391433,12391676-12391685
Length = 640
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 250 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 354
R + +AKLR +AKEK +R+ + KE A+ +E
Sbjct: 515 RRNDAKAKLRAAKAKEKELREGLKNDMKEGATPIE 549
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 265 EAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIV 414
E ++ E + EK++ D +L EE A +EE S T + +DK+V
Sbjct: 964 EVQVAETTSTEKIVEDKELAEETTEGEATAEVHIEE-TSTTERTVEDKVV 1012
>04_04_0871 +
28898262-28898534,28899552-28900015,28900242-28900356,
28900510-28901157,28901282-28901374,28901658-28901795,
28902147-28902206
Length = 596
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/45 (31%), Positives = 29/45 (64%)
Frame = +1
Query: 256 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTA 390
+KK+A+ +E++ K K R+ + ++EKE+A A + + + GT+
Sbjct: 505 AKKKARAKELK-KLKKAREKEKEKEKEKAQASQSQRTQSNVRGTS 548
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,180,522
Number of Sequences: 37544
Number of extensions: 226455
Number of successful extensions: 634
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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