Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_G24
         (754 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical pr...    31   0.88 
U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical pr...    31   0.88 

>U53341-6|AAC69106.1|  790|Caenorhabditis elegans Hypothetical
           protein F49E10.2a protein.
          Length = 790

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 152 VVTRSPAVPSWW*PRCNGGXAKSPXYXXFGXNQTKXPPL 268
           V T +P +P WW P    G  + P +      Q   PPL
Sbjct: 680 VPTTTPKIPRWW-PLAGSGSTEQPWWQKVQTGQNTLPPL 717


>U53341-5|AAL06020.1|  842|Caenorhabditis elegans Hypothetical
           protein F49E10.2b protein.
          Length = 842

 Score = 31.1 bits (67), Expect = 0.88
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +2

Query: 152 VVTRSPAVPSWW*PRCNGGXAKSPXYXXFGXNQTKXPPL 268
           V T +P +P WW P    G  + P +      Q   PPL
Sbjct: 680 VPTTTPKIPRWW-PLAGSGSTEQPWWQKVQTGQNTLPPL 717


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,118,779
Number of Sequences: 27780
Number of extensions: 213924
Number of successful extensions: 228
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)