Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_G23
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0412 - 18749430-18749587,18749696-18749857,18750062-187501...    38   0.008
07_03_0464 + 18456502-18456697,18457281-18457368,18457448-184575...    28   9.0  

>02_03_0412 -
           18749430-18749587,18749696-18749857,18750062-18750194,
           18751640-18751744,18751818-18751935,18752232-18752320,
           18752407-18753660,18753785-18753831,18754285-18754339,
           18754783-18754884
          Length = 740

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 24/66 (36%), Positives = 34/66 (51%)
 Frame = +1

Query: 616 NFNHLLNFMYPTRGNIERSERRXPLLQRRQFHRLSFRQDHDLYLRAYCQFVVKEDYDYKI 795
           N N+LLNF Y     I R + R P     +  R     + DL+L+A  +FVV +   Y+I
Sbjct: 149 NANYLLNFHYDP---ISRPQPRGPRTYPTRRQRKIRPYNKDLFLQANFKFVVLDTGSYEI 205

Query: 796 NSLDPD 813
             +DPD
Sbjct: 206 ELMDPD 211


>07_03_0464 +
           18456502-18456697,18457281-18457368,18457448-18457524,
           18457844-18457883,18458109-18458175,18458908-18458993,
           18459380-18459461,18459778-18459834,18460135-18460173,
           18460402-18460472,18460912-18461047,18461048-18461092
          Length = 327

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +3

Query: 213 WLSKMSALYVISLPPRGVSRLVFVDVGRI 299
           +L+KM      +LPP+GV RL+FV  G I
Sbjct: 115 YLAKMHDGSKSALPPKGVERLIFVLQGSI 143


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,744,868
Number of Sequences: 37544
Number of extensions: 465871
Number of successful extensions: 1098
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)