Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_G23
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68114-2|CAA92158.1|  463|Caenorhabditis elegans Hypothetical pr...    36   0.053
U29377-3|AAA68720.2|  472|Caenorhabditis elegans Hypothetical pr...    31   0.86 
Z81106-2|CAB03220.2|  468|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr...    29   6.1  
Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical pr...    29   6.1  
U41533-12|AAA83173.1|  521|Caenorhabditis elegans Hypothetical p...    29   6.1  

>Z68114-2|CAA92158.1|  463|Caenorhabditis elegans Hypothetical
           protein F17A2.3 protein.
          Length = 463

 Score = 35.5 bits (78), Expect = 0.053
 Identities = 19/62 (30%), Positives = 33/62 (53%)
 Frame = -2

Query: 361 SRRLMPSTVVELIDLIFCPSLILPTSTKTKRDTPRGGNDITYKADILESHVYDYKIKKIQ 182
           ++ L PS +    DL F  S     ST+ +R+ PR G  +T  + ++++H+ D K+K   
Sbjct: 401 AKSLEPSALAAR-DLTFFISHRTQNSTEIQRNAPRAGAPVTNHSSVVQAHLNDRKLKNTI 459

Query: 181 LP 176
            P
Sbjct: 460 FP 461


>U29377-3|AAA68720.2|  472|Caenorhabditis elegans Hypothetical
           protein K05F1.5 protein.
          Length = 472

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -2

Query: 418 HVSYCCGAKACESNRSSFYSRRLMPSTVVELIDLIFCPSLILP 290
           H+   CG+  C+ NR+S +       T  E++ L  CP   LP
Sbjct: 62  HIDVSCGSDRCQFNRNSSHWHCAKCQTGFEIVGLHCCPITSLP 104


>Z81106-2|CAB03220.2|  468|Caenorhabditis elegans Hypothetical
           protein R06C1.3 protein.
          Length = 468

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +2

Query: 308 TKN*IDQLNHSRGHQPSTVKRTPI*LTSLGPAT--IRNVKVLVAHLKMNHFGKMY 466
           TK  +  +N SRG  PST+ R  +  T+ G     +R +  L  H + N FG++Y
Sbjct: 4   TKRAVSPVNLSRGTIPSTIHRDELQCTANGTIANLVRQLSSLSKHAE-NIFGEIY 57


>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical
           protein F45H11.4 protein.
          Length = 1243

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 186 YNSPYYTIVYLAGKYTIKNFPN*KKGVVHSLSS 88
           YN  Y  ++Y AG Y  K F + +K + H  SS
Sbjct: 195 YNWTYVAVLYSAGNYGEKGFESLEKLIAHRSSS 227


>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical
           protein F45H11.4 protein.
          Length = 1243

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 186 YNSPYYTIVYLAGKYTIKNFPN*KKGVVHSLSS 88
           YN  Y  ++Y AG Y  K F + +K + H  SS
Sbjct: 195 YNWTYVAVLYSAGNYGEKGFESLEKLIAHRSSS 227


>Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical
           protein E02H1.3 protein.
          Length = 402

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -2

Query: 346 PSTVVELIDLIFCPSLILPTSTKTKRDTPRGGNDITYKADILESHVYDYKIK 191
           PS + +L+DL   PS   P  T    DTP    D  YK++ +E  V+DY +K
Sbjct: 266 PSLISQLLDLKKYPSR--PQYTLAS-DTPLCLFDCGYKSEDVEWKVHDYTLK 314


>U41533-12|AAA83173.1|  521|Caenorhabditis elegans Hypothetical
           protein R05F9.11 protein.
          Length = 521

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +1

Query: 724 RQDHDLYLRAYCQFVVKEDYDYKI 795
           R+D D  LRAY QF     YDYK+
Sbjct: 17  REDLDTLLRAYLQFKSVRFYDYKM 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,973,580
Number of Sequences: 27780
Number of extensions: 434256
Number of successful extensions: 1042
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)