Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_G22
         (897 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29535-12|AAK31457.2|  180|Caenorhabditis elegans Hypothetical p...    62   4e-10
AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical ...    31   1.1  
AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm rece...    31   1.5  
AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical ...    29   4.5  

>U29535-12|AAK31457.2|  180|Caenorhabditis elegans Hypothetical
           protein C25H3.9a protein.
          Length = 180

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 31/136 (22%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
 Frame = +2

Query: 191 LKGSHGERTMALQPSRWQWHKFKDMLHFYMM-VGLIPAGALIFYCNVFIGPAQLTPIP-E 364
           ++ SH       +P +   ++ KD+ HFY + +G +P    + Y ++  G  +L   P E
Sbjct: 24  IRSSHAA-VFRKRPGQLIVNRIKDVCHFYFIGIGFLPVLFCLAYNHIVYGTCELKDYPTE 82

Query: 365 GYTPKYWEYHRHPITRFIARYIHNNPQQDYEKFMHFLDEEQQRIKLRALEKEIIKKMAER 544
           G  P +W++ R PI ++ A++   +  + +E+ + + +++    + R +E+ +     ER
Sbjct: 83  GPAPHHWQFERTPIRQWWAKWFGVSDVEHHERNLAYYEKQGILARWRQIEQRVKHLEGER 142

Query: 545 QDYQAYYYKPMVNKYL 592
            DY+ + Y+P+ + ++
Sbjct: 143 WDYKGWSYQPVSSTWV 158


>AL132859-2|CAB60488.1|  315|Caenorhabditis elegans Hypothetical
           protein Y39C12A.3 protein.
          Length = 315

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +2

Query: 128 VKNSLKSPNKIQNVTFTTAKTLKGSHGE 211
           VK  L+ PNKIQ+V +++ K LKG+ GE
Sbjct: 282 VKIGLRKPNKIQSVRYSSRK-LKGTFGE 308


>AC024882-3|AAF60934.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 155 protein.
          Length = 340

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 345 N*HLSLKDIRPNTGSTTAIQSPDLLLAIFTTIHNRIMRNL 464
           N  L+ KDI  N G TT++  P LL+  F T   R ++NL
Sbjct: 194 NQDLTAKDIMANLGLTTSMVIPILLIVFFGTKTYRKVKNL 233


>AL034488-1|CAA22455.1|  625|Caenorhabditis elegans Hypothetical
           protein Y54G11A.1 protein.
          Length = 625

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -3

Query: 166 ILYFIRRL*RIFYQIYAERSTESTPRHHFYFGLFDSCRK----KKKILRIPYSGTVRK 5
           +++F ++   IF+++ + R     PR+   F + D+ RK    +KK+   P   TV K
Sbjct: 541 MIFFFQKKKAIFHRLQSPRLLSKMPRNSHNFYIIDTVRKIEFYRKKMRCAPLRSTVEK 598


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,956,990
Number of Sequences: 27780
Number of extensions: 435969
Number of successful extensions: 1113
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)