Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_G21
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.28
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.28
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.28
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 32 0.64
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.64
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 32 0.64
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 32 0.64
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.85
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 26 1.9
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 26 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 6.0
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 29 6.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 6.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.9
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP F PP P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP F PP P
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.28
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP F PP P
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPP 372
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.9 bits (69), Expect = 0.64
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP + PP P
Sbjct: 39 PPPPPPPPCGGGYEAPPPPPP 59
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 31.9 bits (69), Expect = 0.64
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP PP P
Sbjct: 68 PPPPPPPPLISILQQAPPPPP 88
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPP 739
PPPPPPPP PP
Sbjct: 84 PPPPPPPPPPTLKAPPPP 101
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXPXXKKKK 766
PPPPPPPP F PP K +
Sbjct: 1013 PPPPPPPPADFFANIAPPPVDADKASR 1039
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPP 739
PPPPPPPP FF P
Sbjct: 1012 PPPPPPPPPADFFANIAP 1029
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXPXXKKKK 766
PPPPPPPP F PP K +
Sbjct: 252 PPPPPPPPADFFANIAPPPVDADKASR 278
Score = 31.5 bits (68), Expect = 0.85
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPP 739
PPPPPPPP FF P
Sbjct: 251 PPPPPPPPPADFFANIAP 268
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.5 bits (68), Expect = 0.85
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXPXXKKKK 766
PPPPPPPP PP P K
Sbjct: 1341 PPPPPPPPSDDLTPVPPPPPPPPTMSK 1367
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP PP P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPP 1360
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 26.2 bits (55), Expect(2) = 1.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPP PP P
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPP 142
Score = 22.6 bits (46), Expect(2) = 1.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 860 GXXXPPPPPPXK 895
G PPPPPP +
Sbjct: 134 GGSSPPPPPPPR 145
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 689 PPPPPPPXXXFFXXXPPXXP 748
P PPPPP + PP P
Sbjct: 295 PRPPPPPSSGMWPPPPPPPP 314
Score = 25.8 bits (54), Expect(2) = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 692 PPPPPPXXXFFXXXPPXXP 748
PPPPPP + PP P
Sbjct: 344 PPPPPPGMRYPGGMPPPPP 362
Score = 23.0 bits (47), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 686 PPPPPPPP 709
PP PPPPP
Sbjct: 271 PPVPPPPP 278
Score = 21.0 bits (42), Expect(2) = 6.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 689 PPPPPP 706
PPPPPP
Sbjct: 327 PPPPPP 332
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 25.8 bits (54), Expect(2) = 1.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 689 PPPPPPPXXXFFXXXPPXXP 748
P PPPPP + PP P
Sbjct: 285 PRPPPPPSSGMWPPPPPPPP 304
Score = 25.8 bits (54), Expect(2) = 7.0
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 692 PPPPPPXXXFFXXXPPXXP 748
PPPPPP + PP P
Sbjct: 334 PPPPPPGMRYPGGMPPPPP 352
Score = 23.0 bits (47), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 686 PPPPPPPP 709
PP PPPPP
Sbjct: 261 PPVPPPPP 268
Score = 21.0 bits (42), Expect(2) = 7.0
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 689 PPPPPP 706
PPPPPP
Sbjct: 317 PPPPPP 322
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP PP P
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPP 596
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXP 748
PPPPPPPP PP P
Sbjct: 476 PPPPPPPPPENEPEEFPPPPP 496
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 841 GGGXXXXXXPPPPPPP 888
GGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 841 GGGXXXXXXPPPPPPP 888
GGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPP 739
PPPPPPPP F P
Sbjct: 577 PPPPPPPPPSFMFNGKVP 594
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 841 GGGXXXXXXPPPPPPP 888
GGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXPXXKKK 763
PPPPPPP PP P ++K
Sbjct: 157 PPPPPPPVSVPSSKPTPPPPPPAQQK 182
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPP 739
PPPPPPPP PP
Sbjct: 7 PPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPPXXPXXKKK 763
PPPPPPP PP P ++K
Sbjct: 157 PPPPPPPVSVPSSKPTPPPPPPAQQK 182
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 686 PPPPPPPPXXXFFXXXPP 739
PPPPPPPP PP
Sbjct: 7 PPPPPPPPPPPAASAPPP 24
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 841 GGGXXXXXXPPPPPPP 888
GGG PPPPPPP
Sbjct: 58 GGGYGCGIPPPPPPPP 73
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 689 PPPPPPPXXXFFXXXPPXXP 748
PPPPPPP PP P
Sbjct: 63 PPPPPPPPPPMCPPPPPPMP 82
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,655,739
Number of Sequences: 27780
Number of extensions: 209223
Number of successful extensions: 8758
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3667
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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