Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_G19
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.49
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.49
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.49
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.1
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.6
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.0
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.49
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 4/109 (3%)
Frame = +1
Query: 388 LPLPRSLTRCARSFGCGERYXLTQRAGNTX----IPXIRGDNPXKKPX*PKXPXKRAXKP 555
LP P + A S G L G +P I G P P P P
Sbjct: 685 LPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Query: 556 XKKXPXXWXXFSXXGPPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXF 702
PPPPP PPP G PP G F
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/101 (27%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = +1
Query: 454 TQRAGNTXIPXIRGDNPXKKPX*PKXPXKRAXKPXKKXPXXWXXFSXXGPPPPPX--XXX 627
T G++ +P I G P P P P P + PPPPP
Sbjct: 698 TSAGGSSALPPITGGPPPP----PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 628 XXKKXXPPPXFXXG--XGXXPPXXGXFXXXXXPXXFXPPPP 744
PPP G PP G F P PPPP
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.49
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 4/109 (3%)
Frame = +1
Query: 388 LPLPRSLTRCARSFGCGERYXLTQRAGNTX----IPXIRGDNPXKKPX*PKXPXKRAXKP 555
LP P + A S G L G +P I G P P P P
Sbjct: 685 LPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Query: 556 XKKXPXXWXXFSXXGPPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXF 702
PPPPP PPP G PP G F
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/101 (27%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = +1
Query: 454 TQRAGNTXIPXIRGDNPXKKPX*PKXPXKRAXKPXKKXPXXWXXFSXXGPPPPPX--XXX 627
T G++ +P I G P P P P P + PPPPP
Sbjct: 698 TSAGGSSALPPITGGPPPP----PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 628 XXKKXXPPPXFXXG--XGXXPPXXGXFXXXXXPXXFXPPPP 744
PPP G PP G F P PPPP
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.49
Identities = 28/109 (25%), Positives = 30/109 (27%), Gaps = 4/109 (3%)
Frame = +1
Query: 388 LPLPRSLTRCARSFGCGERYXLTQRAGNTX----IPXIRGDNPXKKPX*PKXPXKRAXKP 555
LP P + A S G L G +P I G P P P P
Sbjct: 268 LPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 327
Query: 556 XKKXPXXWXXFSXXGPPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXF 702
PPPPP PPP G PP G F
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/101 (27%), Positives = 32/101 (31%), Gaps = 4/101 (3%)
Frame = +1
Query: 454 TQRAGNTXIPXIRGDNPXKKPX*PKXPXKRAXKPXKKXPXXWXXFSXXGPPPPPX--XXX 627
T G++ +P I G P P P P P + PPPPP
Sbjct: 281 TSAGGSSALPPITGGPPPP----PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Query: 628 XXKKXXPPPXFXXG--XGXXPPXXGXFXXXXXPXXFXPPPP 744
PPP G PP G F P PPPP
Sbjct: 337 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP----PPPP 373
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXX---PPPXFXXGXGXX---PPXXGXFXXXXXPXXFXPPPP 744
PPPPP PPP F G PP F P F PPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 8/67 (11%)
Frame = +1
Query: 589 SXXGPPP-----PPXXXXXXKKXXPPPXFXXGX---GXXPPXXGXFXXXXXPXXFXPPPP 744
S GPPP PP PPP G PP F P F PPPP
Sbjct: 266 SYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
Query: 745 XXXXXXP 765
P
Sbjct: 326 HFGMGPP 332
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXX---PPPXFXXGXGXX---PPXXGXFXXXXXPXXFXPPPP 744
PPPPP PPP F G PP F P F PPPP
Sbjct: 305 PPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHPMMFRGGPYPPFFPPPPP 358
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 8/67 (11%)
Frame = +1
Query: 589 SXXGPPP-----PPXXXXXXKKXXPPPXFXXGX---GXXPPXXGXFXXXXXPXXFXPPPP 744
S GPPP PP PPP G PP F P F PPPP
Sbjct: 266 SYRGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
Query: 745 XXXXXXP 765
P
Sbjct: 326 HFGMGPP 332
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPP 744
PPPPP PPP PP P PPPP
Sbjct: 31 PPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPPXXXXXXP 765
PPPPP PPP PP P PPPP P
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 604 PPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPP 744
PPPP PPP F G PP G PPPP
Sbjct: 75 PPPPGPGGIPP---PPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPPXXXXXXP 765
PPP P + PPP PP G PPPP P
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 328
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXX---PPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPPXXXXXXP 765
PPPPP PPP G PP P + PPPP P
Sbjct: 318 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPPXXXXXXP 765
PPP P + PPP PP G PPPP P
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP 338
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Frame = +1
Query: 601 PPPPPXXXXXXKKXX---PPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPPXXXXXXP 765
PPPPP PPP G PP P + PPPP P
Sbjct: 328 PPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 602 PPPPPXXXXXXKXXXPPXXXXXGXXXPPPXGGXXXXXXXXXXXXPPP 742
PPPP P G PPP GG PPP
Sbjct: 256 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 602 PPPPPXXXXXXKXXXPPXXXXXGXXXPPPXGGXXXXXXXXXXXXPPP 742
PPPP P G PPP GG PPP
Sbjct: 277 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 602 PPPPPXXXXXXKXXXPPXXXXXGXXXPPPXGGXXXXXXXXXXXXPPP 742
PPPP P G PPP GG PPP
Sbjct: 262 PPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 743 GGGGXXXXGXXXXXXXPXXGGXXPXPXXKXGGGXXFXXXXXXXGGGGG 600
GGGG G P GG GGG GGGGG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGG 90
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 743 GGGGXXXXGXXXXXXXPXXGGXXPXPXXKXGGGXXFXXXXXXXGGGGG 600
GGGG G P GG GGG GGGGG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGG 147
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 743 GGGGXXXXGXXXXXXXPXXGGXXPXPXXKXGGGXXFXXXXXXXGGGGG 600
GGGG G P GG GGG GGGGG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -3
Query: 743 GGGGXXXXGXXXXXXXPXXGGXXPXPXXKXGGGXXFXXXXXXXGGGGG 600
GGGG G P GG GGG GGGGG
Sbjct: 62 GGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 598 GPPPPPXXXXXXKKXXPPPXFXXGXGXXPP-XXGXFXXXXXPXXFXPPPP 744
G PPPP PP G PP G P + PPPP
Sbjct: 365 GGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPP 414
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 598 GPPPPPXXXXXXKKXXPPPXFXXGXGXXPPXXGXFXXXXXPXXFXPPPPXXXXXXP 765
G PPPP + PPP G PP G P F PP P
Sbjct: 1466 GGPPPPRGMNSPMRGMPPPM----RGGGPPMRGGPPMRGGPPMFRGGPPGPGRGMP 1517
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 8.0
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 12/59 (20%)
Frame = +1
Query: 604 PPPPXXXXXXKKXXPPPXFXXGXG----XXPPXXGXFXXXXXPXXF--------XPPPP 744
PPPP PPP F G G PP G P F PPPP
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPP 800
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,896,542
Number of Sequences: 27780
Number of extensions: 254787
Number of successful extensions: 889
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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