Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_G18
(1010 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.20
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.45
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 1.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.8
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 3.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 4.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.5
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 23 6.6
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 9.7
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 9.7
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 33/120 (27%), Positives = 36/120 (30%), Gaps = 2/120 (1%)
Frame = +3
Query: 327 PXNPXPPXXXPAPGXLPRKTPPKXPXGLXPXXXXRXKPX--NPPPXXXPPPKGXGPRXPX 500
P P P A K P P P R KP N PP PR
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPP--PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA 347
Query: 501 XXKXPRXFXGXRXXXPLTPKHFPPLNRDPPPXWGTXFXXXXPPPXPGGPXXQKATAXXPL 680
P G P P+ P R PPP + P P P P + A A PL
Sbjct: 348 AGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP-GRSAPALPPL 406
Score = 33.1 bits (72), Expect = 0.064
Identities = 34/138 (24%), Positives = 37/138 (26%), Gaps = 8/138 (5%)
Frame = +3
Query: 327 PXNPXPPXXXPAPGXLPRKTPPKXPXGLXPXXXXRXKPXNPPPXXXPPPK--------GX 482
P P P P P +P + P P P P N PP P
Sbjct: 231 PIPPSIPSSRP-PERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSK 289
Query: 483 GPRXPXXXKXPRXFXGXRXXXPLTPKHFPPLNRDPPPXWGTXFXXXXPPPXPGGPXXQKA 662
P P + P P NR PP PPP P P A
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP--PPRSNA 347
Query: 663 TAXXPLSPXXXXAXRDPP 716
PL P A PP
Sbjct: 348 AGSIPLPPQGRSAPPPPP 365
Score = 31.1 bits (67), Expect = 0.26
Identities = 31/109 (28%), Positives = 32/109 (29%), Gaps = 1/109 (0%)
Frame = +2
Query: 668 GLXPLPSXXXGXKGPPPXAXXKTXXGGGXXPPRGXLXPSXXPXAXXPPRXXPXSXPT-PS 844
G PLP G PPP G PP P A PP S P P
Sbjct: 349 GSIPLPPQ--GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPA-PPPAIPGRSAPALPP 405
Query: 845 XGFAPXXXIXXXXSFCXPPXXAXPXAXPXLXPV*GPPXXXXXPXRPPXP 991
G A + P P A P L P P P PP P
Sbjct: 406 LGNASRTSTPPVPT----PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Score = 30.7 bits (66), Expect = 0.34
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +2
Query: 308 PGGXXAPXXPXXPXXKXRPRXTPSXNPPEXPXXVXPXXPXPXKTXXPPPXSPPXP 472
P AP P P PS + P P P P T PP SPP P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPP----PIPPPSNGTVSSPPNSPPRP 274
Score = 30.7 bits (66), Expect = 0.34
Identities = 23/88 (26%), Positives = 26/88 (29%), Gaps = 2/88 (2%)
Frame = +1
Query: 586 PPLGGGXXSXXXPXXPPXGXPPXKRPXRXXPSPLXXXRPXGTP--PXXXXKNXXXXXXXX 759
PPLG + P P PP P +P P G P P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP--PSLPMGAPAAPPLPPSAPIAPPLPA 461
Query: 760 XXXXPXPFPXPLXPXPPPXXPXIPXHPL 843
P P P P PPP P P+
Sbjct: 462 GMPAAPPLP-PAAPAPPPAPAPAPAAPV 488
Score = 30.3 bits (65), Expect = 0.45
Identities = 22/94 (23%), Positives = 29/94 (30%)
Frame = +2
Query: 710 PPPXAXXKTXXGGGXXPPRGXLXPSXXPXAXXPPRXXPXSXPTPSXGFAPXXXIXXXXSF 889
PPP ++ PP G + P PP P + P+ P + +
Sbjct: 391 PPPAIPGRSAPA---LPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 890 CXPPXXAXPXAXPXLXPV*GPPXXXXXPXRPPXP 991
PP P P PP P PP P
Sbjct: 448 PLPPSAPIAPPLPAGMPA-APPLPPAAPAPPPAP 480
Score = 26.6 bits (56), Expect = 5.5
Identities = 16/65 (24%), Positives = 18/65 (27%)
Frame = +2
Query: 302 PRPGGXXAPXXPXXPXXKXRPRXTPSXNPPEXPXXVXPXXPXPXKTXXPPPXSPPXPXRX 481
P G P P P P PP P + P P +PP P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM 463
Query: 482 GAPXP 496
A P
Sbjct: 464 PAAPP 468
Score = 26.2 bits (55), Expect = 7.3
Identities = 18/63 (28%), Positives = 19/63 (30%), Gaps = 6/63 (9%)
Frame = +2
Query: 326 PXXPXXPXXKXRPRXTPSXNPPEXPXXVXPXXPXPXKTXXPP------PXSPPXPXRXGA 487
P P P P P PP P P P P P +PP P A
Sbjct: 418 PTPPSLPPSA--PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 488 PXP 496
P P
Sbjct: 476 PPP 478
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.5 bits (68), Expect = 0.20
Identities = 25/107 (23%), Positives = 32/107 (29%)
Frame = +3
Query: 360 APGXLPRKTPPKXPXGLXPXXXXRXKPXNPPPXXXPPPKGXGPRXPXXXKXPRXFXGXRX 539
AP + P P NPPP PPP + + + R
Sbjct: 160 APNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPP-PPPPAVEDQAADANEPDDYYSSGRA 218
Query: 540 XXPLTPKHFPPLNRDPPPXWGTXFXXXXPPPXPGGPXXQKATAXXPL 680
P P + P DP P PPP P P T+ P+
Sbjct: 219 VSPEIPPTYTPKQADPLP-------APPPPPPPTLPPQSTNTSQLPM 258
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.45
Identities = 15/47 (31%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +3
Query: 360 APGXLPRKTPPKXPXGLXPXXXXRXKPXNPPPXXXPP-PKGXGPRXP 497
AP + TPP P + P P PP PP P P P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 375 PRKTPPKXPXGLXPXXXXRXKPXNPPPXXXPPPKGXGP 488
P TPP P P P PPP PPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPP-PPPMSVPPPPSAPP 1722
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +3
Query: 309 PGGXGXPXNPXPPXXXPAPGXLPRKTPPKXPXGLXPXXXXRXKPXNPPPXXXPPP 473
P G P N P PAP PK P + P P P PP
Sbjct: 1433 PTNPGAPSNHAPQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPP 1487
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 772 PXPFPXPLXPXPPPXXPXIPXHP 840
P P P P+ PPP P +P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGP 1727
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 1.0
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = +2
Query: 302 PRPGGXXAPXXPXXPXXKXRPRXTPSXNPP-EXPXXVXPXXPXPXKTXXPPPXS---PPX 469
P+P AP P P P PS PP P P P P P S PP
Sbjct: 1095 PKPS-VAAPPVPK-PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 470 PXRXGAP 490
P GAP
Sbjct: 1153 PAPSGAP 1159
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = +2
Query: 311 GGXXAPXXPXXPXXKXRPRXTPSXNPPEXPXXVXPXXPXPXKTXXPPPXS----PPXPXR 478
G AP P + PS PP P P P P P PP P
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Query: 479 XGAP 490
GAP
Sbjct: 1118 SGAP 1121
Score = 26.6 bits (56), Expect = 5.5
Identities = 21/76 (27%), Positives = 22/76 (28%)
Frame = +2
Query: 779 PSXXPXAXXPPRXXPXSXPTPSXGFAPXXXIXXXXSFCXPPXXAXPXAXPXLXPV*GPPX 958
PS P P P P PS G P PP A P P + G P
Sbjct: 1155 PSGAPPVPKPSVAAPP-VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV----GVPP 1209
Query: 959 XXXXPXRPPXPXXGGG 1006
PP P G
Sbjct: 1210 VPPPSTAPPVPTPSAG 1225
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +2
Query: 302 PRPGGXXAPXXPXXPXXKXRPRXTPSXNPPEXPXXVXPXXPXPXKTXXPPPXSP 463
P P AP P P P PS P P P P + PP P
Sbjct: 1151 PVPAPSGAPPVPK-PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.2 bits (55), Expect = 7.3
Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Frame = +2
Query: 668 GLXPLPSXXXGXKGPPPXAXX----KTXXGGGXXPPRGXLXPSXXPXAXXPPRXXPXSXP 835
G+ P+P G PP + K G PP P P A PP P +
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 836 TP 841
P
Sbjct: 1237 PP 1238
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/55 (30%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Frame = +3
Query: 327 PXNPXPPXXXPAPGXLPRKTP------PKXPXGLXPXXXXRXKPXNPPPXXXPPP 473
P + PP PA G P P PK G+ P P P P PP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +3
Query: 336 PXPPXXXPAPGXLPRKTPPKXPXGLXPXXXXRXKPXNPPPXXXPPP 473
P P P P LP P P P P P PPP
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +2
Query: 335 PXXPXXKXRPRXTPSXNPPEXPXXVXPXXPXPXKTXXPPPXSPPXPXRXGAP 490
P P + RP + P P P P K P P S P P + AP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKA-PPIPSSLPPPAQPAAP 180
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 386 PPEXPXXVXPXXPXPXKTXXPPPXSPPXPXRXGAPXP 496
P P + P P PPP PP G P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +2
Query: 383 NPPEXPXXVXPXXPXPXKTXXPPPXSPPXPXRXGAPXP 496
+PP P V P P P P PP P G P P
Sbjct: 731 SPPPPPPAVIVPTPAPA----PIPVPPPAPIMGGPPPP 764
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/57 (28%), Positives = 17/57 (29%), Gaps = 2/57 (3%)
Frame = +2
Query: 323 APXXPXXPXXKXRPRXTPSXNPPEXPXXVXPXXPXPXK--TXXPPPXSPPXPXRXGA 487
+P P P P PP P P P P PP PP P A
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -1
Query: 845 GRGWXGXXGXFGGGXGXRGXG 783
GRG G G FGGG G RG G
Sbjct: 458 GRGGFGGRGGFGGGRG-RGRG 477
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 845 GRGWXGXXGXFGGGXGXRGXGKGXG 771
GRG G G FGG G G G+G G
Sbjct: 452 GRGGFGGRGGFGGRGGF-GGGRGRG 475
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 327 PXNPXPPXXXPAPGXLPRKTPPKXP 401
P NP PP P PG P PP P
Sbjct: 6 PGNPPPPP--PPPGFEPPSQPPPPP 28
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 22.6 bits (46), Expect(2) = 6.6
Identities = 11/38 (28%), Positives = 11/38 (28%)
Frame = +3
Query: 375 PRKTPPKXPXGLXPXXXXRXKPXNPPPXXXPPPKGXGP 488
P K P L P R PP P P P
Sbjct: 1011 PPKQPANRVVPLPPTASQRASAYEPPTVSVPSPSALSP 1048
Score = 21.8 bits (44), Expect(2) = 6.6
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 549 LTPKHFPPLNRDPPPXWGTXFXXXXPPPXPGGPXXQKATAXXPLS 683
+TP+ PP++ PP T PPP A + P++
Sbjct: 1050 VTPQ-LPPVSSRLPPVSATRPQIPQPPPVSTALPSSSAVSRPPIA 1093
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = -3
Query: 528 PXXFSXFXFXXGXGAPXLXGXGGDXGGGXXVFXGXGXXGXTXXGFSGG 385
P F F G G G GG GG G G G GF GG
Sbjct: 204 PGGFGGFGGFGGEGHHH-GGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 362 PRXTPSXNPPEXPXXVXPXXPXPXKTXXPPPXSPPXPXR 478
P T + N P V P P P T PP P R
Sbjct: 712 PMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPPVR 750
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,866,249
Number of Sequences: 5004
Number of extensions: 25026
Number of successful extensions: 174
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 133
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 525259918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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