Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_G11
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34976-1|CAA84428.1| 681|Caenorhabditis elegans Cog2 protein pr... 66 4e-11
U61947-9|AAB03139.2| 681|Caenorhabditis elegans Conserved oligo... 66 4e-11
Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical p... 33 0.28
Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical pr... 32 0.65
AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical ... 32 0.65
AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical ... 32 0.65
Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical p... 29 4.6
U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z34976-1|CAA84428.1| 681|Caenorhabditis elegans Cog2 protein
protein.
Length = 681
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/81 (34%), Positives = 54/81 (66%)
Frame = +1
Query: 220 LCFDRNDFVKTNFSVDNFLAEHQDVASLETMRDDLGMYLKVLRLAMIELINKDYANFVNL 399
LCF++ F + +F+V+ F+ + + L+T++ DL +YLK ++ +MIELIN DYA+FV+L
Sbjct: 24 LCFNKTHFNREDFNVERFMNLARQKSDLKTIQQDLRLYLKSVQNSMIELINDDYADFVHL 83
Query: 400 CATLIGFDKAIAKVHVPLEQL 462
+ L+ ++ K+ + ++
Sbjct: 84 SSNLVSLQDSLNKIEQDINRI 104
>U61947-9|AAB03139.2| 681|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 2 protein.
Length = 681
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/81 (34%), Positives = 54/81 (66%)
Frame = +1
Query: 220 LCFDRNDFVKTNFSVDNFLAEHQDVASLETMRDDLGMYLKVLRLAMIELINKDYANFVNL 399
LCF++ F + +F+V+ F+ + + L+T++ DL +YLK ++ +MIELIN DYA+FV+L
Sbjct: 24 LCFNKTHFNREDFNVERFMNLARQKSDLKTIQQDLRLYLKSVQNSMIELINDDYADFVHL 83
Query: 400 CATLIGFDKAIAKVHVPLEQL 462
+ L+ ++ K+ + ++
Sbjct: 84 SSNLVSLQDSLNKIEQDINRI 104
>Z92777-10|CAB07172.2| 304|Caenorhabditis elegans Hypothetical
protein C17H1.8 protein.
Length = 304
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/63 (25%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 454 EQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLN-TLDNVLQNIT 630
EQL + + N++ + KE ++H L +K+++++ + +TI++LN ++ +++
Sbjct: 46 EQLKRSIQNMEHDMRMQAKEEQRSDIEKHEL-TKREIIEQHQETISNLNRSMSEAEKSMR 104
Query: 631 EQK 639
EQK
Sbjct: 105 EQK 107
>Z81576-5|CAB04646.2| 1696|Caenorhabditis elegans Hypothetical protein
R10E8.6 protein.
Length = 1696
Score = 31.9 bits (69), Expect = 0.65
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Frame = +1
Query: 223 CFDRNDFVKTNFSVDNFLAEHQDVASLETMRDDLGMYLKVLRLAMIELI-----NKDYAN 387
C D N ++T S+D L E ++++ + D V + +L+ K +
Sbjct: 771 CEDLNMVLETVESIDTLLIESEEISPSRSDDDPNNSNETVFGCCLTKLVENLKQRKQMLH 830
Query: 388 FVNLCATLIGFDKAIAKVHVPLEQLNKDVLNVKQSLEDAMKETS-MWMSQRHNLQSKKQL 564
N L +V+ LE L+ +V+ +K S+ED E S + ++ L+++ L
Sbjct: 831 VRNFRLNL-NMQSPSDQVYSILELLSPEVVELKTSIEDTKLELSEINFTKTKELKAESFL 889
Query: 565 LKYYSQTINSLNTLDNVLQNIT-EQKMYDKIVLADR 669
L + ++ + + LQ+ + E +Y K VL R
Sbjct: 890 LSIPIKLLSKFSKVAVTLQDFSVEDLVYLKEVLLSR 925
>AF078157-7|AAG24077.2| 285|Caenorhabditis elegans Hypothetical
protein F25E5.6a protein.
Length = 285
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/97 (21%), Positives = 41/97 (42%)
Frame = +1
Query: 451 LEQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQNIT 630
L+ +N + + + + E A + + Q + QTINS++ ++ +Q +
Sbjct: 80 LKGMNPNAMQIDEKEESAKNYKHLKKLKNQYCQKDSEHSMEKKQTINSIDAIETKMQKLV 139
Query: 631 EQKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLEHK 741
+ Y +I L YN TI + + LE+K
Sbjct: 140 DALSYLEIKLRKFRLSAYNPHWSTIPCLEEFLLLENK 176
>AF078157-6|AAQ62458.1| 406|Caenorhabditis elegans Hypothetical
protein F25E5.6b protein.
Length = 406
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/97 (21%), Positives = 41/97 (42%)
Frame = +1
Query: 451 LEQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNTLDNVLQNIT 630
L+ +N + + + + E A + + Q + QTINS++ ++ +Q +
Sbjct: 80 LKGMNPNAMQIDEKEESAKNYKHLKKLKNQYCQKDSEHSMEKKQTINSIDAIETKMQKLV 139
Query: 631 EQKMYDKIVLADRAAMQYNQLKFTIKKCDNLVKLEHK 741
+ Y +I L YN TI + + LE+K
Sbjct: 140 DALSYLEIKLRKFRLSAYNPHWSTIPCLEEFLLLENK 176
>Z92777-8|CAJ58494.1| 293|Caenorhabditis elegans Hypothetical
protein C17H1.13 protein.
Length = 293
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/63 (25%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +1
Query: 454 EQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLN-TLDNVLQNIT 630
EQ ++ N++ S+ KE + H L+ K+++++ + +TI++LN ++ +++
Sbjct: 35 EQFRSNIQNMEHSMRMQAKEEQRSDIENHELR-KREIIEKHQETISNLNRSMSEAEKSMR 93
Query: 631 EQK 639
EQK
Sbjct: 94 EQK 96
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = +1
Query: 424 KAIAKVHVPLEQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLKYYSQTINSLNT 603
KA+A ++ QL ++ K + +K+ + + N K + LK ++T
Sbjct: 412 KAVASLNA---QLKNELSYTKAVHKRILKDKEQCIEELENRIMKLETLKE-TETFEEKRE 467
Query: 604 LDNVLQN-ITEQKM--YDKIVLADRAAMQYNQLKFTIKKCDNLVK-LEHKTQ 747
++ N +T+ ++ + KI+ + A ++N++K ++ DN+V LE + Q
Sbjct: 468 INKSATNELTDMEISKFSKIIATGKNARKWNEMKVQFERIDNIVNGLEARYQ 519
>Z81050-12|CAN86586.1| 420|Caenorhabditis elegans Hypothetical
protein C50B6.14b protein.
Length = 420
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 460 LNKDVLNVKQSLEDAMKETSMWMSQRHN-LQSKKQLLKYYSQTINSLNTLDNVLQNITEQ 636
+N L V ++ D +KE + + N ++KQL+ +NSL +++N +Q I +
Sbjct: 97 MNPHALEVDKTNTDCLKEVTKRKNMIGNDAVNEKQLV------LNSLESMENKIQKIADM 150
Query: 637 KMYDKIVLADRAAMQYN 687
Y ++ L A YN
Sbjct: 151 LTYLELKLDQFRASSYN 167
>Z81050-11|CAN86585.1| 399|Caenorhabditis elegans Hypothetical
protein C50B6.14a protein.
Length = 399
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 460 LNKDVLNVKQSLEDAMKETSMWMSQRHN-LQSKKQLLKYYSQTINSLNTLDNVLQNITEQ 636
+N L V ++ D +KE + + N ++KQL+ +NSL +++N +Q I +
Sbjct: 97 MNPHALEVDKTNTDCLKEVTKRKNMIGNDAVNEKQLV------LNSLESMENKIQKIADM 150
Query: 637 KMYDKIVLADRAAMQYN 687
Y ++ L A YN
Sbjct: 151 LTYLELKLDQFRASSYN 167
>U58762-6|AAG01563.2| 208|Caenorhabditis elegans Hypothetical
protein T27F7.1 protein.
Length = 208
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/58 (29%), Positives = 32/58 (55%)
Frame = +1
Query: 397 LCATLIGFDKAIAKVHVPLEQLNKDVLNVKQSLEDAMKETSMWMSQRHNLQSKKQLLK 570
L ++I KAI+K+HV Q+N ++ +++ L S+ S ++S +QL+K
Sbjct: 61 LAKSMIQSRKAISKIHVSKAQINSVIMCMQEQLATIRMAGSLQKS-TEVMKSMQQLVK 117
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,158,450
Number of Sequences: 27780
Number of extensions: 364636
Number of successful extensions: 867
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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