Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_G03
         (908 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016428-2|AAO26002.1|  316|Caenorhabditis elegans Serpentine re...    30   2.6  
AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical ...    29   4.6  
Z81587-12|CAN99727.1|  220|Caenorhabditis elegans Hypothetical p...    29   6.1  
Z81587-11|CAB04705.2|  247|Caenorhabditis elegans Hypothetical p...    29   6.1  
AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical ...    29   6.1  
U59212-1|AAB09671.1|  428|Caenorhabditis elegans transmembrane p...    28   8.0  
U39677-5|AAN71843.1|  383|Caenorhabditis elegans Innexin protein...    28   8.0  
U39677-4|AAN71842.1|  428|Caenorhabditis elegans Innexin protein...    28   8.0  

>AF016428-2|AAO26002.1|  316|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 65 protein.
          Length = 316

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -1

Query: 536 DYFWFSHSIYLYLYF--WSFLSTFHWLGFLSNLCFQYHQLSTL 414
           D FW  + ++  L F  +SFL TF WL F   +  Q   L T+
Sbjct: 134 DKFWSKYYLHCGLAFALYSFLPTFFWLDFAIKVEIQNETLVTI 176


>AF067618-1|AAC19199.2| 1174|Caenorhabditis elegans Hypothetical
           protein F56H1.3 protein.
          Length = 1174

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +2

Query: 305 VKEENQEPSKTEIKIET-DQQLETL--PVLKISLKDGVQTVLKVDDTENKDL 451
           ++E+N+   KT +K+ET +Q +E L   V K  + D ++  +K+ +TE  D+
Sbjct: 421 LEEKNKRFQKTTLKLETIEQYVELLGSSVKKNQIFDELEASIKICETEKPDV 472


>Z81587-12|CAN99727.1|  220|Caenorhabditis elegans Hypothetical
           protein T06G6.6b protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 272 CKSENI--EITPTVKEENQEPSKTEIKIETDQQLETLPVLKISLKDGVQ 412
           CKS ++  +I  + K+  ++    E+  E     E +PV+K+   +G+Q
Sbjct: 114 CKSSDVIFQIECSTKQAKEQDQMVEVPEEVQVVEEEIPVMKLETDNGIQ 162


>Z81587-11|CAB04705.2|  247|Caenorhabditis elegans Hypothetical
           protein T06G6.6a protein.
          Length = 247

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 272 CKSENI--EITPTVKEENQEPSKTEIKIETDQQLETLPVLKISLKDGVQ 412
           CKS ++  +I  + K+  ++    E+  E     E +PV+K+   +G+Q
Sbjct: 141 CKSSDVIFQIECSTKQAKEQDQMVEVPEEVQVVEEEIPVMKLETDNGIQ 189


>AL110498-3|CAB54470.1|  846|Caenorhabditis elegans Hypothetical
           protein Y64G10A.6 protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
 Frame = +2

Query: 326 PSKTEIKIETDQ---QLETLPVLKISLKDGVQTVLKVDDTENKDLK 454
           P   E+K+E +    Q+ETLP+ ++  K   +  L+V+  +++D+K
Sbjct: 682 PPSLEVKVEDEDAFGQMETLPIDELKEKFAAKRDLEVEVLDSEDVK 727


>U59212-1|AAB09671.1|  428|Caenorhabditis elegans transmembrane
           protein protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
 Frame = -1

Query: 563 NVLNYLISCDYF--WFSHSIYLYLYFWSFL-------STFHWL 462
           NV ++ + C      F+  I+L+L+FW F+       S FHW+
Sbjct: 256 NVHHHTVQCVLMINMFNEKIFLFLWFWYFMVAFVSAVSMFHWI 298


>U39677-5|AAN71843.1|  383|Caenorhabditis elegans Innexin protein 1,
           isoform b protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
 Frame = -1

Query: 563 NVLNYLISCDYF--WFSHSIYLYLYFWSFL-------STFHWL 462
           NV ++ + C      F+  I+L+L+FW F+       S FHW+
Sbjct: 256 NVHHHTVQCVLMINMFNEKIFLFLWFWYFMVAFVSAVSMFHWI 298


>U39677-4|AAN71842.1|  428|Caenorhabditis elegans Innexin protein 1,
           isoform a protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 9/43 (20%)
 Frame = -1

Query: 563 NVLNYLISCDYF--WFSHSIYLYLYFWSFL-------STFHWL 462
           NV ++ + C      F+  I+L+L+FW F+       S FHW+
Sbjct: 256 NVHHHTVQCVLMINMFNEKIFLFLWFWYFMVAFVSAVSMFHWI 298


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,076,743
Number of Sequences: 27780
Number of extensions: 153591
Number of successful extensions: 600
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 600
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)