Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_G02
(778 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.056
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 31 0.92
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 1.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.9
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 25 8.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 24 8.8
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 35.1 bits (77), Expect = 0.056
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 390 PPPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPP 512
PPP GG PPP PPP F PPPPP
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPP-----MFGAPPPPPPP 120
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +3
Query: 393 PPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPPXF 518
PP GG PPP F PPP PPPPP F
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMM-----GGIPPPPPMF 111
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 426 PPPXFFXXXXPPPXFFFFFFXXXXPPPPP 512
PPP FF PP F PPPPP
Sbjct: 727 PPPQFFPMIGGPPLMHPTFSTSAPPPPPP 755
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +3
Query: 390 PPPLXXGGGXXXP---PPXFFXXXXPPPXFFFFFFXXXXPPPP 509
P P G G P PP F PPP F F PPPP
Sbjct: 717 PAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPP 759
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 425 PPPXXFXXXXXPPXFFFFFFFXXXPPPPPXFXXXGGGG 538
PPP PP F PPPP F GGGG
Sbjct: 772 PPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGG 809
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 393 PPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPPXF 518
PP+ G PPP PPP F PPPP F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 390 PPPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPP 512
PPP GG PPP PPP F PPPPP
Sbjct: 759 PPPPPPPGGCPPPPP------PPPPG----GFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 393 PPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPPXF 518
PP+ G PPP PPP F PPPP F
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 390 PPPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPP 512
PPP GG PPP PPP F PPPPP
Sbjct: 759 PPPPPPPGGCPPPPP------PPPPG----GFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 393 PPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPPXF 518
PP+ G PPP PPP F PPPP F
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +3
Query: 390 PPPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPP 512
PPP GG PPP PPP F PPPPP
Sbjct: 342 PPPPPPPGGCPPPPP------PPPPG----GFKGGPPPPPP 372
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 25.4 bits (53), Expect(2) = 8.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 390 PPPLXXGGGXXXPPPXFFXXXXPPPXF 470
PPP GGG PPP PPP +
Sbjct: 42 PPPPPCGGGYEAPPP------PPPPSY 62
Score = 21.0 bits (42), Expect(2) = 8.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 498 PPPPPXFXXGG 530
PPPPP GG
Sbjct: 55 PPPPPPSYAGG 65
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 24.2 bits (50), Expect(2) = 8.8
Identities = 12/41 (29%), Positives = 13/41 (31%)
Frame = +3
Query: 390 PPPLXXGGGXXXPPPXFFXXXXPPPXFFFFFFXXXXPPPPP 512
PPP+ G PPP PPPPP
Sbjct: 541 PPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPP 581
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 498 PPPPPXFXXGG 530
PPPPP F G
Sbjct: 581 PPPPPSFMFNG 591
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,273,067
Number of Sequences: 27780
Number of extensions: 233810
Number of successful extensions: 769
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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