Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_F24
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0497 - 8891852-8892270,8892368-8892473,8892573-8892911,889...    37   0.019
05_07_0278 + 28911722-28911934,28912154-28913055,28913142-289135...    30   2.2  
03_06_0559 + 34719296-34719410,34719519-34719577,34719664-347213...    29   3.9  
02_01_0121 + 890391-890429,890565-890730,891209-891769,892365-89...    29   6.8  
09_04_0045 + 14094536-14094870,14094958-14095147                       28   9.0  
05_07_0149 + 28033300-28033557                                         28   9.0  
03_06_0214 + 32411341-32411347,32412642-32412878,32412955-324132...    28   9.0  

>03_02_0497 -
           8891852-8892270,8892368-8892473,8892573-8892911,
           8893065-8893415
          Length = 404

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = -2

Query: 383 DELWPLLRRRKPAVNPVRTCKRSRGRKSTFQASPRSNLSLEDHRSNLDSDTN 228
           D LW ++   + A N VR C RS GR+   ++SP SNLS     S+ D   N
Sbjct: 298 DGLWDVVSN-EVACNVVRACLRSSGRRERNRSSPTSNLSPRQSSSSGDEAPN 348


>05_07_0278 +
           28911722-28911934,28912154-28913055,28913142-28913581,
           28913628-28913955,28914101-28914743
          Length = 841

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 329 TCKRSRGRKSTFQASPRSNLSLEDHRSNLDSDTNCPPT 216
           T K+++G +ST  A   S+LS     S++   T+C PT
Sbjct: 86  TNKKTQGERSTLAARAMSSLSWRMQSSSVSHSTSCNPT 123


>03_06_0559 +
           34719296-34719410,34719519-34719577,34719664-34721322,
           34722421-34722562,34722645-34723330
          Length = 886

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 25/94 (26%), Positives = 39/94 (41%)
 Frame = -1

Query: 795 GSSVQSXWMVALXTIXPTWSLEKDMIPEATFSSXSXADQFFGRGSRAFATTVSKSKYTPT 616
           GSS +S W  A  T   + +        A FS    AD F      A + TV+ +   P+
Sbjct: 648 GSSTES-WRSANGTKVFSSTEGATTSNSACFSKFLEADAFSEYSDTASSITVTTTDIPPS 706

Query: 615 VLIQAQVTE*SDACDILQRVLFKAPLNTISCSGV 514
               +   +     D ++ +L  +PLN   CSG+
Sbjct: 707 DSSSSSRMDCRQEIDFIREILNTSPLNGQICSGL 740


>02_01_0121 +
           890391-890429,890565-890730,891209-891769,892365-892845,
           892952-893033,893818-894021
          Length = 510

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -2

Query: 335 VRTCKRSRGRKSTFQASPRSNLSLEDHRSNLDSDTNCPPTIPNVRNIN 192
           V TC +S   +    A      S  D  + L S T C P  P VR+++
Sbjct: 237 VETCAKSALAEEITVADSAVTFSRHDSSATLQSATTCIPPPPTVRSVS 284


>09_04_0045 + 14094536-14094870,14094958-14095147
          Length = 174

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 21/74 (28%), Positives = 32/74 (43%)
 Frame = +2

Query: 446 LSVLRKFRNVKLWRLKIWEYAKGTPLQDMVFNGALNRTRWRISHASDYSVT*ACISTVGV 625
           LSV RK R    W+L  W     + L D      + R RW    ++D ++    ++ +G 
Sbjct: 14  LSVTRKKRAAATWKLCPWPCCPASGLFDQ-----MPRRRWNTLCSADAALATKLVALLGR 68

Query: 626 YLDLDTVVAKALDP 667
                + V KA DP
Sbjct: 69  LSSPVSAVDKAPDP 82


>05_07_0149 + 28033300-28033557
          Length = 85

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 212 ESLEDNSCHYQDSNDDLPVISSS-VEMPE 295
           +S E+  CHY+D  DD+  I S  V+ P+
Sbjct: 49  KSAEEIRCHYEDLTDDVKTIESGRVQFPK 77


>03_06_0214 +
           32411341-32411347,32412642-32412878,32412955-32413226,
           32413757-32413849,32413928-32414131
          Length = 270

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = +1

Query: 97  SASTKAFQLLCYIAIVPRLCDYSHFTYGFRAGFIFLTLGI 216
           S +T+AF +  +I+ + +LCD +   YG  A F+   LGI
Sbjct: 188 SQNTQAFHM--FISALLQLCDRTGMLYGELARFVLRLLGI 225


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,284,492
Number of Sequences: 37544
Number of extensions: 457366
Number of successful extensions: 1048
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)