Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_F20
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    23   3.4  

>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 22.6 bits (46), Expect(3) = 3.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 537 FFXXPPPPPP 566
           ++  PPPPPP
Sbjct: 122 YYGHPPPPPP 131



 Score = 22.6 bits (46), Expect(3) = 3.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 549 PPPPPPXK 572
           PPPPPP K
Sbjct: 130 PPPPPPFK 137



 Score = 20.6 bits (41), Expect(3) = 3.4
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +3

Query: 513 KKKXXXXXFFXXPPPPP 563
           KKK         PPPPP
Sbjct: 101 KKKKRHHHHHPPPPPPP 117


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,769,876
Number of Sequences: 37544
Number of extensions: 172578
Number of successful extensions: 2613
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2397
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)