Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_F19
         (1132 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyosteli...    36   1.5  

>UniRef50_Q54H12 Cluster: Actin-binding protein; n=2; Dictyostelium
           discoideum|Rep: Actin-binding protein - Dictyostelium
           discoideum AX4
          Length = 1220

 Score = 36.3 bits (80), Expect = 1.5
 Identities = 27/86 (31%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
 Frame = -3

Query: 836 PPXLGGXXKXFXPKKXGAXPPFXLGGEXNPXKGSXPXGKXXSPFXGNLG-F*KKKPXXXA 660
           PP +GG      P      PP   GG   P       G    P  G  G F   KP   A
Sbjct: 600 PPMMGGGGPPPPPP-----PPMMGGGPPPPPPMGGKGGPPPPPGGGGFGLFNSNKPPANA 654

Query: 659 PXXTKXKPVFXXGKFPFXPXPXKKXG 582
           P  T  KP     +F +   P KK G
Sbjct: 655 PKFTVSKPTTKVKQFQWTKIPNKKLG 680


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,419,978
Number of Sequences: 1657284
Number of extensions: 6550682
Number of successful extensions: 9546
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 5774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9264
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 111406767782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)