Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_F15
         (919 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    26   0.42 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.73 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   0.73 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   1.3  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    23   2.9  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    23   2.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.8  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 26.2 bits (55), Expect = 0.42
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 633 IVKNPLIKVITAYYIFGILI 574
           I+KNP ++  T YY+F + I
Sbjct: 65  IIKNPAMQTATNYYLFSLAI 84


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 295 PQRPTELKMISSLMFNVLIIWLCKYVLYF 381
           P+   E K I   M+   IIWL    +YF
Sbjct: 699 PENFNESKFIGFTMYTTCIIWLAFVPIYF 727


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 25.4 bits (53), Expect = 0.73
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 295 PQRPTELKMISSLMFNVLIIWLCKYVLYF 381
           P+   E K I   M+   IIWL    +YF
Sbjct: 789 PENFNESKFIGFTMYTTCIIWLAFVPIYF 817


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 295 PQRPTELKMISSLMFNVLIIWLCKYVLYF 381
           P+   E K I   M+   +IWL    LYF
Sbjct: 841 PEAFNESKHIGFTMYTTCVIWLAFVPLYF 869


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 577 NQTLIYCQFFQTNL*LQGYIVKQNYWLFFVK*YIVKCSLFY 455
           N T     +F   L    Y+V    W++FV  +++  S ++
Sbjct: 198 NMTACGTDYFNRGLLSASYLVCYGIWVYFVPLFLIIYSYWF 238


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -1

Query: 577 NQTLIYCQFFQTNL*LQGYIVKQNYWLFFVK*YIVKCSLFY 455
           N T     +F   L    Y+V    W++FV  +++  S ++
Sbjct: 74  NMTACGTDYFNRGLLSASYLVCYGIWVYFVPLFLIIYSYWF 114


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 145 PYLSPDRTNISRIDKNQ*GVFIARNE 222
           P +SPD  ++  +DK + GV +   E
Sbjct: 746 PTISPDSRHLVTLDKQETGVTLVVQE 771


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,675
Number of Sequences: 438
Number of extensions: 4695
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)