Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_F12
(942 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 127 2e-30
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 119 7e-28
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 93 4e-20
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 83 7e-17
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 80 4e-16
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 39 0.001
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 28 2.2
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 27 3.8
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 6.7
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 26 6.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 8.8
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 8.8
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 127 bits (307), Expect = 2e-30
Identities = 59/126 (46%), Positives = 77/126 (61%)
Frame = +2
Query: 314 SPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAG 493
+PWR ++QRG YLA +ETLD GK + + +V +A RYY G
Sbjct: 77 APWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFRYYGG 136
Query: 494 KADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPA 673
ADK G TI +D + +T EP+GVCGQIIPWN+P M +WKIAPA+A G T++LK A
Sbjct: 137 WADKDYGQTIETDIKRFAYTRHEPIGVCGQIIPWNFPFLMCAWKIAPAVACGNTIILKTA 196
Query: 674 EQTPLT 691
E TPL+
Sbjct: 197 ELTPLS 202
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 133 KVDVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAFH-- 306
K ++ LFINN+ VD+V +P E +I +VA+ D+ D+D+AV A+ AF
Sbjct: 17 KTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVADADEEDVDIAVKVARAAFQTD 76
Query: 307 ---RLFPMAYHGRFSTR 348
R F A GR +R
Sbjct: 77 APWRKFSSAQRGRCLSR 93
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 119 bits (286), Expect = 7e-28
Identities = 55/128 (42%), Positives = 78/128 (60%), Gaps = 1/128 (0%)
Frame = +2
Query: 311 YSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKP-VKQSEEEVYFSASVLRYY 487
+ W+ + S++G + LA +E +D GKP V + +V + ++LRY
Sbjct: 69 FKTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYC 128
Query: 488 AGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLK 667
AG ADKI G IP+ E L + + P+GVCGQI+PWNYP+ M WKIAPALAAG +++K
Sbjct: 129 AGWADKIYGQVIPTGPEKLAYAKRTPIGVCGQIVPWNYPLNMAGWKIAPALAAGNCIIIK 188
Query: 668 PAEQTPLT 691
AE TPL+
Sbjct: 189 SAETTPLS 196
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 93.5 bits (222), Expect = 4e-20
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +2
Query: 398 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNT-IPSDGEVLTFTMKEPVGV 574
LA + TL+ GK + ++ EV ++A + ++AG+A +I G++ + S+ + T+K+PVGV
Sbjct: 103 LATMMTLENGKALGDAKGEVVYAAKFIDWFAGEALRISGDSSMSSNPQNRIITIKQPVGV 162
Query: 575 CGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTRRGXXTSXXRARVP 733
G I PWN+P M++ K+ ALAAGCTVV++PA +TP T RA VP
Sbjct: 163 VGIITPWNFPAAMITRKVGAALAAGCTVVIRPAAETPFTALALAKLAERAGVP 215
Score = 29.9 bits (64), Expect = 0.54
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 160 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 303
+I +WV A S KTF NP + V + + A+ A +AF
Sbjct: 27 YIGGKWVTAASGKTFDVENPGLNETLAPVTDMSVEETRKAIKVAHEAF 74
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 82.6 bits (195), Expect = 7e-17
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +2
Query: 398 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTF--TMKEPVG 571
L ++ TL+ GKP+ Q+E EV + L++YA +A + G+ PS + F ++K+PVG
Sbjct: 97 LVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDVAPSSLQSQNFLISIKQPVG 156
Query: 572 VCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLTRRGXXTSXXRARVP 733
V I PWN+P M++ K ALAAGCT + PA +TP G A P
Sbjct: 157 VSALITPWNFPAAMIARKGGAALAAGCTAIFLPAFRTPYVCLGLVRLAQEAGFP 210
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 139 DVKYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 303
D + + F+ +W+ + + KTF NP +I +VA+ + A++AA +AF
Sbjct: 14 DKSHAQSFVQGKWISSPNNKTFEVDNPATGEIIGKVADVSVEETKKAISAANEAF 68
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 80.2 bits (189), Expect = 4e-16
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Frame = +2
Query: 320 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAGKA 499
W QRG + LA ++T++CGKP + ++ A + YYA A
Sbjct: 78 WAKWPGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVA 137
Query: 500 DK---ILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKP 670
+ + +P++ F + P GV G I PWN+P+ M WK+ PA+A+G VVLKP
Sbjct: 138 ETDNPTVKVPLPNNPGFCAFEKRFPRGVIGVITPWNFPLKMALWKLVPAIASGNCVVLKP 197
Query: 671 AEQTP 685
+E P
Sbjct: 198 SELAP 202
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 157 LFINNEWVDAV--SKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 303
LFI+ ++V + + K P INP E +I A D+D AV A F
Sbjct: 23 LFIDGKFVSPIEPAAKPIPLINPATEEIIGTCANASAKDVDSAVENAYNTF 73
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 38.7 bits (86), Expect = 0.001
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Frame = +2
Query: 320 WR-TMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKP-VKQSEEEVYFSASVLRYYAG 493
W+ T A +R +Q +Y AE+ D GK V + E+ + + +
Sbjct: 41 WKSTSFAERRNFLKALKENIIRNQDKY-AEIACKDTGKTLVDAAFGEILVTLEKINWTLA 99
Query: 494 KADKILGNTIPSDGEVLT-----FTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTV 658
++ L T +LT + EP+GV ++ WNYP+ I AL AG +
Sbjct: 100 NGEQSLRPT-KRPNSLLTSYKGGYVKYEPLGVIAALVSWNYPLHNALGPIISALFAGNAI 158
Query: 659 VLKPAEQT 682
V+K +E T
Sbjct: 159 VVKGSELT 166
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 160 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKAD 267
F+ D S+ TF TI PQ+ + E K+D
Sbjct: 224 FLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSD 259
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -2
Query: 287 AATAKSISALSPSATCVMTVSSCGLMVGKVFLLTASTHSLLINSLVYLTST 135
+ +A +SA S + TC +S+ G LTA ++++ NS ST
Sbjct: 442 SGSATLVSASSATGTCASYLSAAGSSATNAISLTADSNAVSRNSSASTMST 492
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 571 SVRSDNTVELPHTNDVLENSTSLSCRMYR--CSEAS*TN 681
SVR +NT +L D++E + R++R SEA+ N
Sbjct: 357 SVRDENTKKLKELQDIIEEQSKHMARLHREGFSEAAENN 395
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 245 SLKEIRRILIWPSPQQRKHSTVYSPWRTMDAS 340
S+KE + PS QR+HS V SP M S
Sbjct: 334 SIKENASQPVAPSASQREHSAVNSPAAAMSPS 365
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 8.8
Identities = 22/73 (30%), Positives = 33/73 (45%)
Frame = -1
Query: 573 TPTGSFMVNVRTSPSEGMVFPNILSAFPA*YLSTLAEKYTSSSDCFTGFPQSKVSSSARY 394
+PT S + +S S F + LS+ S+ + TSSS + S SSS
Sbjct: 299 SPT-STSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSS 357
Query: 393 LDWDSRSSASLSN 355
S+SS+S S+
Sbjct: 358 TTSSSKSSSSFSS 370
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +1
Query: 439 TIRRRSILF-RKRAQIL--RWKSGQDIRKYHSFRRRSPYVHHEGTCRSVRSDN 588
T+ + ++F KR Q L ++K+GQ +R+ + + YV+ E C++ D+
Sbjct: 543 TVHGKIVVFGEKRLQALTEKFKNGQLVRRDYRYWWTPVYVNQELRCKNAYCDS 595
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,138,073
Number of Sequences: 5004
Number of extensions: 63989
Number of successful extensions: 203
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 479324640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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