Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_F12
(942 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde dehydr... 135 4e-32
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 133 2e-31
U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde dehydr... 128 6e-30
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 106 2e-23
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 106 2e-23
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 91 8e-19
U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde dehydr... 83 3e-16
U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde dehydr... 83 3e-16
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 72 5e-13
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 72 5e-13
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 68 9e-12
U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde dehydr... 63 2e-10
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 51 1e-06
AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde dehy... 50 2e-06
AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde dehy... 50 2e-06
AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde dehy... 50 2e-06
U28971-7|ABC48263.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.8
U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF125954-4|AAD14710.1| 337|Caenorhabditis elegans Seven tm rece... 29 4.8
AC006769-5|AAF60577.2| 339|Caenorhabditis elegans Hypothetical ... 29 4.8
AF039045-11|AAB94202.1| 259|Caenorhabditis elegans Hypothetical... 28 8.4
>U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform a protein.
Length = 510
Score = 135 bits (327), Expect = 4e-32
Identities = 68/127 (53%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Frame = +2
Query: 314 SPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQS-EEEVYFSASVLRYYA 490
S WR MDASQRG LA LE+LD GKP + ++ S LRYYA
Sbjct: 84 SEWRRMDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYA 143
Query: 491 GKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKP 670
G ADK G TIP +G+ T+T EPVGVCGQIIPWN+P+ M +WK+ PALA G TVV+K
Sbjct: 144 GWADKNHGKTIPIEGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAMGNTVVMKV 203
Query: 671 AEQTPLT 691
AEQTPL+
Sbjct: 204 AEQTPLS 210
Score = 68.9 bits (161), Expect = 5e-12
Identities = 32/53 (60%), Positives = 41/53 (77%)
Frame = +1
Query: 145 KYTKLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 303
+YT +FINNE+V A S KTF TINP + V+ QVAEGDK D+++AV AA+ AF
Sbjct: 28 QYTGIFINNEFVPAKSGKTFETINPANGKVLAQVAEGDKTDVNIAVKAAQNAF 80
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 133 bits (321), Expect = 2e-31
Identities = 69/148 (46%), Positives = 87/148 (58%), Gaps = 1/148 (0%)
Frame = +2
Query: 293 RKHSTVYSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEE-EVYFSA 469
+K + S WR MDAS RG LA LE+LD GKP K++ ++ S
Sbjct: 104 KKAFKIGSEWRRMDASHRGVLLNRLADLMERDRVILASLESLDNGKPYKEAYNIDLPISI 163
Query: 470 SVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAG 649
RYYAG ADK G TIP G+ T+T EPVGVCGQIIPWN+P+ M +WK+APALA G
Sbjct: 164 KTFRYYAGYADKNHGKTIPVGGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLAPALAMG 223
Query: 650 CTVVLKPAEQTPLTRRGXXTSXXRARVP 733
TVV+K A +TPL+ + A+ P
Sbjct: 224 NTVVMKVAVKTPLSALHVASLIKEAQFP 251
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +1
Query: 154 KLFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 303
+LFINNE+VDA S KTF +NP + ++ +VAEG++ D+D+AV AAKKAF
Sbjct: 58 QLFINNEFVDAKSGKTFEFVNPANGKLLAKVAEGNRDDVDIAVEAAKKAF 107
>U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform b protein.
Length = 422
Score = 128 bits (309), Expect = 6e-30
Identities = 65/122 (53%), Positives = 78/122 (63%), Gaps = 1/122 (0%)
Frame = +2
Query: 329 MDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQS-EEEVYFSASVLRYYAGKADK 505
MDASQRG LA LE+LD GKP + ++ S LRYYAG ADK
Sbjct: 1 MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWADK 60
Query: 506 ILGNTIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTP 685
G TIP +G+ T+T EPVGVCGQIIPWN+P+ M +WK+ PALA G TVV+K AEQTP
Sbjct: 61 NHGKTIPIEGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALAMGNTVVMKVAEQTP 120
Query: 686 LT 691
L+
Sbjct: 121 LS 122
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 106 bits (255), Expect = 2e-23
Identities = 59/129 (45%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = +2
Query: 320 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQS-EEEVYFSASVLRYYAGK 496
WR M A +RG LA LE+LD G + + V S V RY+AG
Sbjct: 483 WRQMSARERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGW 542
Query: 497 ADKILGNTIPSDG----EVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVL 664
DKI G TIP + L T++EP+GV G I PWNYP+ M+SWK+A LAAG TVV
Sbjct: 543 CDKIQGKTIPISNARPNKNLCLTLREPIGVVGLITPWNYPLMMLSWKMAACLAAGNTVVH 602
Query: 665 KPAEQTPLT 691
KPA+ TPLT
Sbjct: 603 KPAQVTPLT 611
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 118 IINMVKVDVKYTK-LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAK 294
++N+ +++K+ FI+ ++V + +TF TINP E I ++ AD+D AV AAK
Sbjct: 416 VLNVNNMELKFPHDQFIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAK 475
Query: 295 KAFHR 309
KAF R
Sbjct: 476 KAFER 480
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 106 bits (255), Expect = 2e-23
Identities = 59/129 (45%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Frame = +2
Query: 320 WRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQS-EEEVYFSASVLRYYAGK 496
WR M A +RG LA LE+LD G + + V S V RY+AG
Sbjct: 483 WRQMSARERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGW 542
Query: 497 ADKILGNTIPSDG----EVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVL 664
DKI G TIP + L T++EP+GV G I PWNYP+ M+SWK+A LAAG TVV
Sbjct: 543 CDKIQGKTIPISNARPNKNLCLTLREPIGVVGLITPWNYPLMMLSWKMAACLAAGNTVVH 602
Query: 665 KPAEQTPLT 691
KPA+ TPLT
Sbjct: 603 KPAQVTPLT 611
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 118 IINMVKVDVKYTK-LFINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAK 294
++N+ +++K+ FI+ ++V + +TF TINP E I ++ AD+D AV AAK
Sbjct: 416 VLNVNNMELKFPHDQFIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAK 475
Query: 295 KAFHR 309
KAF R
Sbjct: 476 KAFER 480
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 91.5 bits (217), Expect = 8e-19
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Frame = +2
Query: 311 YSPW-RTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYY 487
+ W T A QRG + LA L T + GKP+ ++ E+ +SA+ +Y
Sbjct: 68 FDKWAHTYSAKQRGAILHKWFEILVQRETELATLLTKEQGKPLAEARGEIQYSAAYFDWY 127
Query: 488 AGKADKILGNTIPSDG-EVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVL 664
AG+A ++ G +PS L +EP+GV I PWN+P M++ K A AL+ GC+ V+
Sbjct: 128 AGEARRVYGQVVPSAVVNRLHLHTREPIGVVALIAPWNFPTAMIARKAAAALSVGCSAVV 187
Query: 665 KPAEQTPLTRRGXXTSXXRARVP 733
KP+ TPL+ + A +P
Sbjct: 188 KPSGDTPLSALALAQTAEEAGIP 210
>U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform b protein.
Length = 503
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +2
Query: 398 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVC 577
+A E + GKP+ +++ +V +Y+G A +LG +P D +T + PVGV
Sbjct: 101 IAYWECISNGKPIAEAKADVLSCVDTFYFYSGIASDLLGQHVPLDASRYAYTRRLPVGVV 160
Query: 578 GQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 691
I WNYPI SWK APALA G V+ KP+ +P+T
Sbjct: 161 AAIGAWNYPIQTCSWKTAPALACGNAVIYKPSPLSPVT 198
>U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform a protein.
Length = 687
Score = 83.0 bits (196), Expect = 3e-16
Identities = 38/98 (38%), Positives = 55/98 (56%)
Frame = +2
Query: 398 LAELETLDCGKPVKQSEEEVYFSASVLRYYAGKADKILGNTIPSDGEVLTFTMKEPVGVC 577
+A E + GKP+ +++ +V +Y+G A +LG +P D +T + PVGV
Sbjct: 285 IAYWECISNGKPIAEAKADVLSCVDTFYFYSGIASDLLGQHVPLDASRYAYTRRLPVGVV 344
Query: 578 GQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAEQTPLT 691
I WNYPI SWK APALA G V+ KP+ +P+T
Sbjct: 345 AAIGAWNYPIQTCSWKTAPALACGNAVIYKPSPLSPVT 382
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 72.1 bits (169), Expect = 5e-13
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = +2
Query: 314 SPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAG 493
S W A RG + +A E GKP+ ++ ++ SA ++ G
Sbjct: 63 SAWGETTALDRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFFGG 122
Query: 494 KADKIL-GNTIPSDG---EVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVV 661
A +L G+++ G + + +T +EP GV G I WNYP WK+APALAAG VV
Sbjct: 123 IATAVLQGDSLELPGGPSQRIAYTRREPYGVVGCIGAWNYPFQTCVWKVAPALAAGNAVV 182
Query: 662 LKPAEQTP 685
KP+ P
Sbjct: 183 YKPSPFAP 190
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 72.1 bits (169), Expect = 5e-13
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = +2
Query: 314 SPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYAG 493
S W A RG + +A E GKP+ ++ ++ SA ++ G
Sbjct: 63 SAWGETTALDRGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFFGG 122
Query: 494 KADKIL-GNTIPSDG---EVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVV 661
A +L G+++ G + + +T +EP GV G I WNYP WK+APALAAG VV
Sbjct: 123 IATAVLQGDSLELPGGPSQRIAYTRREPYGVVGCIGAWNYPFQTCVWKVAPALAAGNAVV 182
Query: 662 LKPAEQTP 685
KP+ P
Sbjct: 183 YKPSPFAP 190
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 68.1 bits (159), Expect = 9e-12
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Frame = +2
Query: 311 YSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEE-EVYFSASVLRYY 487
+ W+ QR + +A LE+ D GKP+ ++ ++ R +
Sbjct: 76 FKTWKKTTVQQRSALLNKVANLIEEFNDDIAILESRDQGKPIGLAKVMDIPRCVQNFRDF 135
Query: 488 AGKADKILG-NTIPSD--GEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTV 658
A A L +TI G+ + + +PVGV G I PWN P+ ++S+K+APAL AG TV
Sbjct: 136 ANAALYSLSTSTILEQPTGKFVNYVKNDPVGVAGLISPWNLPLYLLSFKLAPALVAGNTV 195
Query: 659 VLKPAEQTPLT 691
V KP+E T +T
Sbjct: 196 VCKPSEMTSVT 206
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 160 FINNEWVDAVSKKTFPTINPQDETVITQVAEGDKADIDLAVAAAKKAF 303
FI NE+ A S+K ++NP ++ +G ++D AV AAK+AF
Sbjct: 31 FIGNEF--ARSEKLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEAF 76
>U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde
dehydrogenase protein 9 protein.
Length = 531
Score = 63.3 bits (147), Expect = 2e-10
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +2
Query: 311 YSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYA 490
Y+ W + A +RG +Q + L +L +L+ GK + EV + Y
Sbjct: 89 YNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEYVDICDYAT 148
Query: 491 GKADKILGNTIPSD--GEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVL 664
G + + G PS+ G L P+GV G I +N+P + W A AL G +VV
Sbjct: 149 GLSRSLEGKIFPSERPGHAL-LEQWNPLGVVGVISAFNFPCAVYGWNNALALVTGNSVVW 207
Query: 665 KPAEQTPLT 691
KPA TPLT
Sbjct: 208 KPAPSTPLT 216
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +2
Query: 311 YSPWRTMDASQRGXXXXXXXXXXXSQSRYLAELETLDCGKPVKQSEEEVYFSASVLRYYA 490
++ W+ R + LAE T++ GK + +E +V V+ +
Sbjct: 80 FNTWKNTSPLTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHAC 139
Query: 491 GKADKILGNTIPS-DGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLK 667
++G T+P+ ++ T + + P+GV I P+N+P + W ALA G T+V+K
Sbjct: 140 SVPSLMMGETLPNVSRDMDTHSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIK 199
Query: 668 PAEQTP 685
P+EQ P
Sbjct: 200 PSEQDP 205
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 51.2 bits (117), Expect = 1e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +2
Query: 518 TIPSDGEVLTFTMKEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAE 676
T+P+D + +K+P GV I PWNYP+ M+ + P++AAG T+V+KP+E
Sbjct: 92 TLPTDKP---YIVKDPKGVVLVISPWNYPVSMVLLPMIPSIAAGNTIVIKPSE 141
>AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform c protein.
Length = 494
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2
Query: 557 KEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAE 676
K+P GV I PWNYP+ M+ + PA+AAG TVV+KP+E
Sbjct: 101 KDPKGVVLIISPWNYPVSMILLPMVPAIAAGNTVVIKPSE 140
>AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform b protein.
Length = 493
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2
Query: 557 KEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAE 676
K+P GV I PWNYP+ M+ + PA+AAG TVV+KP+E
Sbjct: 101 KDPKGVVLIISPWNYPVSMILLPMVPAIAAGNTVVIKPSE 140
>AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform a protein.
Length = 493
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +2
Query: 557 KEPVGVCGQIIPWNYPIPMMSWKIAPALAAGCTVVLKPAE 676
K+P GV I PWNYP+ M+ + PA+AAG TVV+KP+E
Sbjct: 101 KDPKGVVLIISPWNYPVSMILLPMVPAIAAGNTVVIKPSE 140
>U28971-7|ABC48263.1| 309|Caenorhabditis elegans Hypothetical
protein B0244.4 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -2
Query: 191 LTASTHSLLINSLVYLTSTFTMLMIFLLIQSLS-VSTSVQYVG 66
LTA L + L +TS+FT+ +F LI LS S YVG
Sbjct: 93 LTACVIMLALRILQLITSSFTIYFLFFLIDDLSFYSLLGSYVG 135
>U28736-2|AAA68307.1| 620|Caenorhabditis elegans Hypothetical
protein F26A10.2 protein.
Length = 620
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 300 CFLCCGDGQINIRLISFSDLCYDCFI 223
CF CCG + I L D C CF+
Sbjct: 328 CFECCGQFKSQIALRRHKDQCRPCFV 353
>AF125954-4|AAD14710.1| 337|Caenorhabditis elegans Seven tm
receptor protein 119 protein.
Length = 337
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -2
Query: 254 PSATCVMTVSSCGL---MVGKVFLLTASTHSLLINSLVYLTSTFTML-MIFLLIQSLS 93
PSA + + C L + +FLL S SL I S YL +TFT+ MI+ +++ L+
Sbjct: 2 PSALRYLQYTGCALTEVLSIYLFLLIFSKASLKIGSYKYLMATFTVFSMIYGIVEVLT 59
>AC006769-5|AAF60577.2| 339|Caenorhabditis elegans Hypothetical
protein Y45G12C.10 protein.
Length = 339
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -2
Query: 254 PSATCVMTVSSCGL---MVGKVFLLTASTHSLLINSLVYLTSTFTML-MIFLLIQSLS 93
PSA + + C L + +FLL S SL I S YL +TFT+ MI+ +++ L+
Sbjct: 4 PSALRYLQYTGCALTEVLSIYLFLLIFSKASLKIGSYKYLMATFTVFSMIYGIVEVLT 61
>AF039045-11|AAB94202.1| 259|Caenorhabditis elegans Hypothetical
protein F15E11.5 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 383 SQSRYLAELETLDCGKPVKQSEEEV 457
+ +R+LA LE+L+CG P ++ + +V
Sbjct: 100 TSARFLAGLESLECGPPDRRKKSQV 124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,267,646
Number of Sequences: 27780
Number of extensions: 353261
Number of successful extensions: 1136
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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