Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_F08
         (1322 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    27   1.6  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   6.5  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -3

Query: 834 IXSXXKGEPAPPHIXRXXLXIV*XXLVPWSPPXXXP 727
           + S  +G P PP   R  L  +   L P  PP   P
Sbjct: 438 VMSRLRGSPGPPETDRAELERIVSDLFPTHPPVSWP 473


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -3

Query: 834 IXSXXKGEPAPPHIXRXXLXIV*XXLVPWSPPXXXPXL 721
           + S  +G  APP   R  L  +   L P  PP   P +
Sbjct: 424 VLSRLRGGRAPPETERARLESIVTELFPQHPPFNWPSI 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,466
Number of Sequences: 2352
Number of extensions: 3046
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152871378
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)