Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP15_F_F07
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.11 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   1.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 176 GGGGGPPXPXXPPGGXVLXXXPP--PPP 253
           GG  GPP P  PPGG VL   P   PPP
Sbjct: 525 GGPLGPPPPP-PPGGAVLNIPPQFLPPP 551



 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 201 GXGGPPPPPP 172
           G  GPPPPPP
Sbjct: 526 GPLGPPPPPP 535



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 202 GXGGXPPPPPP 170
           G  G PPPPPP
Sbjct: 526 GPLGPPPPPPP 536


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 10/23 (43%), Positives = 10/23 (43%)
 Frame = +1

Query: 187 GXPPPXXXPXGXGXGXXXPPPPP 255
           G P P       G G   PPPPP
Sbjct: 767 GMPSPSRSAFADGIGSPPPPPPP 789



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 230 PXPXPXGXXXGGGXPPPPPP 171
           P P       G G PPPPPP
Sbjct: 769 PSPSRSAFADGIGSPPPPPP 788



 Score = 25.0 bits (52), Expect = 3.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 202 GXGGXPPPPPP 170
           G G  PPPPPP
Sbjct: 779 GIGSPPPPPPP 789



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 666 PXXPPPPPPXKKKXXG 713
           P  PPPPPP      G
Sbjct: 783 PPPPPPPPPSSLSPGG 798


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 252 GGGGGXXXXTXPPGGXXGXGGPPP 181
           G GGG      P GG    GGP P
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGP 224



 Score = 24.6 bits (51), Expect = 4.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 251 GGGGXXXPXPXPXGXXXGGG 192
           GGGG     P P G   GGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGG 232



 Score = 23.8 bits (49), Expect = 7.0
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 249 GGGGXXXXTXPPGGXXGXGG 190
           GGGG       PGG  G GG
Sbjct: 213 GGGGGSSGGPGPGGGGGGGG 232



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/24 (41%), Positives = 10/24 (41%)
 Frame = -1

Query: 249 GGGGXXXXTXPPGGXXGXGGPPPP 178
           G GG       PGG  G  G P P
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGP 224



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 325 GGXGGGXXPXKKKKXKXKXXXFFXGGGGG 239
           GG GGG     + + + +      GGGGG
Sbjct: 227 GGGGGGRDRDHRDRDREREGGGNGGGGGG 255


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 240 GXXXXTXPPGGXXGXGGPPPP 178
           G    + PP G    GG PPP
Sbjct: 326 GDPQTSRPPSGNDNMGGGPPP 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,253
Number of Sequences: 2352
Number of extensions: 15324
Number of successful extensions: 94
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)