Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_F04
(891 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000586FDE Cluster: PREDICTED: similar to RAD51L2/RA... 155 2e-36
UniRef50_Q8GXF0 Cluster: DNA repair protein RAD51 homolog 3; n=5... 122 9e-27
UniRef50_O43502 Cluster: DNA repair protein RAD51 homolog 3; n=3... 121 3e-26
UniRef50_Q00XV2 Cluster: RAD51-like protein 2; n=2; Ostreococcus... 118 3e-25
UniRef50_UPI0000499144 Cluster: DNA repair protein RAD51C; n=1; ... 112 1e-23
UniRef50_Q54PJ7 Cluster: Putative DNA repair protein; n=1; Dicty... 111 3e-23
UniRef50_Q8SZ30 Cluster: RE19845p; n=2; Sophophora|Rep: RE19845p... 109 1e-22
UniRef50_Q93YY9 Cluster: RAD51C protein; n=1; Chlamydomonas rein... 108 2e-22
UniRef50_A0NCA9 Cluster: ENSANGP00000029732; n=2; Culicidae|Rep:... 107 5e-22
UniRef50_UPI0000E249BA Cluster: PREDICTED: RAD51 homolog C; n=1;... 81 6e-21
UniRef50_Q657A2 Cluster: DNA repair protein radA (RadA)-like; n=... 95 3e-18
UniRef50_Q55075 Cluster: DNA repair and recombination protein ra... 94 4e-18
UniRef50_Q8ZYR9 Cluster: DNA repair and recombination protein ra... 92 2e-17
UniRef50_UPI000065EE6A Cluster: DNA-repair protein XRCC3 (X-ray ... 85 2e-15
UniRef50_P25454 Cluster: DNA repair protein RAD51; n=111; Eukary... 83 1e-14
UniRef50_Q06609 Cluster: DNA repair protein RAD51 homolog 1; n=2... 83 1e-14
UniRef50_Q386Q5 Cluster: Recombinase Rad51, putative; n=1; Trypa... 82 2e-14
UniRef50_UPI000023E7C1 Cluster: hypothetical protein FG00844.1; ... 82 2e-14
UniRef50_Q8TVF0 Cluster: RadA recombinase; n=1; Methanopyrus kan... 81 5e-14
UniRef50_O61128 Cluster: Dmc1 homolog; n=11; Eukaryota|Rep: Dmc1... 80 9e-14
UniRef50_A1RY65 Cluster: Rad51-like; n=1; Thermofilum pendens Hr... 79 2e-13
UniRef50_Q7ZTX4 Cluster: Zgc:56581; n=6; Euteleostomi|Rep: Zgc:5... 77 8e-13
UniRef50_Q4E2R1 Cluster: DNA recombination and repair protein RA... 77 8e-13
UniRef50_A4S2Y8 Cluster: Predicted protein; n=1; Ostreococcus lu... 76 1e-12
UniRef50_O75771 Cluster: DNA repair protein RAD51 homolog 4; n=4... 76 1e-12
UniRef50_O15315 Cluster: DNA repair protein RAD51 homolog 2; n=2... 75 3e-12
UniRef50_UPI0000E47207 Cluster: PREDICTED: hypothetical protein;... 74 4e-12
UniRef50_Q1DS44 Cluster: Putative uncharacterized protein; n=1; ... 74 4e-12
UniRef50_UPI0000D55904 Cluster: PREDICTED: similar to Meiotic re... 74 6e-12
UniRef50_Q8SZF1 Cluster: RE02671p; n=3; Sophophora|Rep: RE02671p... 74 6e-12
UniRef50_Q6CMV0 Cluster: Similar to sp|P25301 Saccharomyces cere... 74 6e-12
UniRef50_O43542 Cluster: DNA-repair protein XRCC3; n=19; Euteleo... 74 6e-12
UniRef50_A2XZT8 Cluster: Putative uncharacterized protein; n=2; ... 73 7e-12
UniRef50_Q27297 Cluster: DNA repair protein Rad51 homolog; n=12;... 73 7e-12
UniRef50_Q9FKM5 Cluster: DNA-repair protein XRCC3 homolog; n=18;... 73 1e-11
UniRef50_UPI0000F2B25B Cluster: PREDICTED: similar to RAD51-like... 72 2e-11
UniRef50_A1CPK9 Cluster: DNA repair protein (Rad57), putative; n... 71 3e-11
UniRef50_A6QWV8 Cluster: Predicted protein; n=1; Ajellomyces cap... 71 4e-11
UniRef50_Q96449 Cluster: Meiotic recombination protein DMC1 homo... 71 4e-11
UniRef50_Q14565 Cluster: Meiotic recombination protein DMC1/LIM1... 71 4e-11
UniRef50_Q9SK02 Cluster: DNA repair protein RAD51 homolog 2; n=6... 71 5e-11
UniRef50_P25453 Cluster: Meiotic recombination protein DMC1; n=3... 70 7e-11
UniRef50_Q49593 Cluster: DNA repair and recombination protein ra... 70 9e-11
UniRef50_O93748 Cluster: DNA repair and recombination protein ra... 70 9e-11
UniRef50_UPI0000D56C94 Cluster: PREDICTED: similar to RAD51 homo... 69 1e-10
UniRef50_Q4Q3T8 Cluster: Recombinase Rad51, putative; n=3; Leish... 69 1e-10
UniRef50_UPI00006CB33C Cluster: hypothetical protein TTHERM_0045... 67 5e-10
UniRef50_Q8I9U4 Cluster: Recombinase Rad51; n=7; Aconoidasida|Re... 67 5e-10
UniRef50_Q9UUL2 Cluster: DNA repair protein rhp57; n=1; Schizosa... 67 5e-10
UniRef50_Q3LW29 Cluster: DNA recombination and repair protein; n... 67 6e-10
UniRef50_Q7RD33 Cluster: DNA repair protein rhp51; n=1; Plasmodi... 67 6e-10
UniRef50_A2QR86 Cluster: Remark: alternate names = YDR004W; n=1;... 66 9e-10
UniRef50_A0NBP3 Cluster: ENSANGP00000030252; n=1; Anopheles gamb... 66 1e-09
UniRef50_Q0D0U2 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_A2ZKR2 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_UPI0000D56187 Cluster: PREDICTED: similar to CG3325-PA;... 65 3e-09
UniRef50_Q54QU4 Cluster: AAA ATPase domain-containing protein; n... 63 8e-09
UniRef50_A6R196 Cluster: DNA repair protein RAD51; n=1; Ajellomy... 63 8e-09
UniRef50_A7ATP8 Cluster: Rad51 protein, putative; n=1; Babesia b... 62 1e-08
UniRef50_UPI0000DB74C1 Cluster: PREDICTED: similar to DNA-repair... 62 2e-08
UniRef50_A6RPX0 Cluster: Putative uncharacterized protein; n=2; ... 61 3e-08
UniRef50_A7E7I5 Cluster: Putative uncharacterized protein; n=1; ... 61 4e-08
UniRef50_Q2GW05 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_Q6FIZ6 Cluster: Similar to sp|P25301 Saccharomyces cere... 60 1e-07
UniRef50_Q6Q241 Cluster: Putative Rad51B protein; n=1; Chlamydom... 59 1e-07
UniRef50_Q4N299 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_A3FQK6 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A1RYZ3 Cluster: Rad51-like; n=1; Thermofilum pendens Hr... 59 2e-07
UniRef50_A0DFA4 Cluster: Chromosome undetermined scaffold_49, wh... 58 2e-07
UniRef50_Q9HMM4 Cluster: DNA repair and recombination protein ra... 58 2e-07
UniRef50_Q16EQ5 Cluster: Rad51A protein, putative; n=1; Aedes ae... 58 4e-07
UniRef50_A3KGH9 Cluster: RAD51 homolog; n=13; Eukaryota|Rep: RAD... 57 7e-07
UniRef50_A4R1B5 Cluster: Putative uncharacterized protein; n=1; ... 57 7e-07
UniRef50_Q00YW7 Cluster: Meiotic recombination protein DMC1, put... 56 9e-07
UniRef50_Q6C269 Cluster: Yarrowia lipolytica chromosome F of str... 56 9e-07
UniRef50_Q0V430 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_Q4SSQ5 Cluster: Chromosome undetermined SCAF14352, whol... 56 1e-06
UniRef50_Q8PZN5 Cluster: DNA repair and recombination protein ra... 56 2e-06
UniRef50_Q69KV4 Cluster: Trad-like protein; n=3; Oryza sativa|Re... 55 2e-06
UniRef50_Q757K4 Cluster: AER008Wp; n=1; Eremothecium gossypii|Re... 55 2e-06
UniRef50_O58001 Cluster: DNA repair and recombination protein ra... 55 2e-06
UniRef50_Q9P6E6 Cluster: Related to RAD57 protein; n=2; Neurospo... 54 5e-06
UniRef50_Q17A54 Cluster: Spindle-b recombination protein spn-b; ... 54 6e-06
UniRef50_Q6BWA8 Cluster: Similar to sp|P25301 Saccharomyces cere... 53 1e-05
UniRef50_P25301 Cluster: DNA repair protein RAD57; n=2; Saccharo... 52 2e-05
UniRef50_UPI0000E46317 Cluster: PREDICTED: similar to Trad; n=1;... 51 3e-05
UniRef50_Q6YU07 Cluster: Putative XRCC3; n=2; Oryza sativa|Rep: ... 51 3e-05
UniRef50_A7DQP6 Cluster: RecA/RadA recombinase-like protein; n=1... 51 5e-05
UniRef50_Q566S1 Cluster: LOC553395 protein; n=4; Danio rerio|Rep... 50 6e-05
UniRef50_A4S5M9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 50 6e-05
UniRef50_UPI0000585DAC Cluster: PREDICTED: similar to RAD51-like... 48 2e-04
UniRef50_A5DET9 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_O43543 Cluster: DNA-repair protein XRCC2; n=16; Tetrapo... 48 3e-04
UniRef50_Q4SEP3 Cluster: Chromosome undetermined SCAF14615, whol... 48 4e-04
UniRef50_Q1ZXF0 Cluster: Putative DNA repair protein; n=1; Dicty... 48 4e-04
UniRef50_Q01C18 Cluster: Rad51B protein; n=2; Ostreococcus|Rep: ... 47 6e-04
UniRef50_Q30L73 Cluster: Gp72; n=1; Listeria phage P100|Rep: Gp7... 47 6e-04
UniRef50_A5K641 Cluster: Putative uncharacterized protein; n=2; ... 47 7e-04
UniRef50_Q5JET4 Cluster: DNA repair and recombination protein ra... 47 7e-04
UniRef50_Q9LQQ2 Cluster: DNA repair protein RAD51 homolog 4; n=6... 47 7e-04
UniRef50_A3FQA6 Cluster: Putative uncharacterized protein; n=2; ... 46 0.001
UniRef50_Q9HPF2 Cluster: DNA repair and recombination protein ra... 46 0.001
UniRef50_Q2NHD1 Cluster: RadB; n=1; Methanosphaera stadtmanae DS... 46 0.002
UniRef50_Q4S4D7 Cluster: Chromosome 2 SCAF14738, whole genome sh... 45 0.002
UniRef50_A5UKT8 Cluster: DNA repair protein, RadB; n=1; Methanob... 45 0.002
UniRef50_Q4ST80 Cluster: Chromosome undetermined SCAF14285, whol... 45 0.003
UniRef50_Q8TWK1 Cluster: RadA recombinase; n=1; Methanopyrus kan... 45 0.003
UniRef50_Q55ZY8 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_O28184 Cluster: DNA repair and recombination protein ra... 44 0.005
UniRef50_Q8TUJ3 Cluster: DNA repair protein; n=6; Euryarchaeota|... 44 0.007
UniRef50_A3KGI2 Cluster: RAD51 homolog; n=1; Mus musculus|Rep: R... 43 0.009
UniRef50_P47581 Cluster: Protein recA; n=2; Mycoplasma|Rep: Prot... 43 0.009
UniRef50_Q4QH57 Cluster: Putative uncharacterized protein; n=3; ... 43 0.012
UniRef50_Q17B21 Cluster: Putative uncharacterized protein; n=1; ... 43 0.012
UniRef50_O50248 Cluster: DNA repair and recombination protein ra... 43 0.012
UniRef50_O14129 Cluster: DNA repair protein rhp55; n=1; Schizosa... 43 0.012
UniRef50_UPI0000D56FBB Cluster: PREDICTED: similar to RAD51-like... 42 0.016
UniRef50_Q6L2I8 Cluster: DNA repair and recombination protein Ra... 42 0.016
UniRef50_A7KV38 Cluster: RecA; n=1; Bacillus phage 0305phi8-36|R... 42 0.021
UniRef50_A7AT31 Cluster: Putative uncharacterized protein; n=1; ... 42 0.021
UniRef50_A0MN30 Cluster: RecA/RadA recombinase; n=1; Thermus pha... 42 0.028
UniRef50_Q4S202 Cluster: Chromosome undetermined SCAF14764, whol... 41 0.037
UniRef50_A5DYZ1 Cluster: Putative uncharacterized protein; n=1; ... 41 0.037
UniRef50_Q384W8 Cluster: Putative uncharacterized protein; n=1; ... 41 0.049
UniRef50_Q9V2F6 Cluster: DNA repair and recombination protein ra... 41 0.049
UniRef50_Q99131 Cluster: REC2 protein; n=1; Ustilago maydis|Rep:... 40 0.064
UniRef50_A6STQ0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.085
UniRef50_A4M8G8 Cluster: AAA ATPase; n=1; Petrotoga mobilis SJ95... 40 0.11
UniRef50_A2DYQ0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_Q22GU3 Cluster: Putative uncharacterized protein; n=1; ... 39 0.15
UniRef50_Q4Z9W4 Cluster: ORF021; n=4; unclassified Myoviridae|Re... 39 0.20
UniRef50_Q7S8S8 Cluster: Putative uncharacterized protein NCU088... 39 0.20
UniRef50_A7HJZ5 Cluster: DNA repair protein RadA; n=2; Thermotog... 38 0.26
UniRef50_Q9HJD3 Cluster: DNA repair and recombination protein ra... 38 0.34
UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|R... 38 0.45
UniRef50_Q1JSB1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.45
UniRef50_Q8G4G9 Cluster: Protein recA; n=1571; root|Rep: Protein... 38 0.45
UniRef50_Q6MQS4 Cluster: RecA protein; n=1; Bdellovibrio bacteri... 37 0.60
UniRef50_A4YKI5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.60
UniRef50_Q76B91 Cluster: RadA-like protein; n=3; Oryza sativa|Re... 37 0.60
UniRef50_Q5CT97 Cluster: Possible AAA domain containing protein;... 37 0.60
UniRef50_Q24DN8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.60
UniRef50_A7RQX3 Cluster: Predicted protein; n=1; Nematostella ve... 37 0.60
UniRef50_Q5A2U1 Cluster: Putative uncharacterized protein RAD57;... 37 0.60
UniRef50_Q9PR61 Cluster: Protein recA; n=1; Ureaplasma parvum|Re... 37 0.60
UniRef50_O78411 Cluster: Probable replicative DNA helicase (EC 3... 37 0.60
UniRef50_A7F7B8 Cluster: Putative uncharacterized protein; n=1; ... 37 0.79
UniRef50_O27728 Cluster: DNA repair and recombination protein ra... 37 0.79
UniRef50_Q97EC5 Cluster: DNA repair protein radA; n=2; Clostridi... 36 1.0
UniRef50_Q8I1P4 Cluster: Putative uncharacterized protein PFD093... 36 1.0
UniRef50_Q12XV7 Cluster: KaiC; n=1; Methanococcoides burtonii DS... 36 1.0
UniRef50_P43705 Cluster: Protein recA; n=176; root|Rep: Protein ... 36 1.0
UniRef50_UPI00005889FA Cluster: PREDICTED: similar to LOC553395 ... 36 1.4
UniRef50_Q8C610 Cluster: Adult male testis cDNA, RIKEN full-leng... 36 1.4
UniRef50_A6NUV1 Cluster: DNA repair protein radA; n=1; Bacteroid... 36 1.4
UniRef50_A5NQF2 Cluster: KaiC domain protein; n=1; Methylobacter... 36 1.4
UniRef50_Q4CZQ5 Cluster: DNA repair protein, putative; n=2; Tryp... 36 1.4
UniRef50_O75771-4 Cluster: Isoform 4 of O75771 ; n=1; Homo sapie... 36 1.8
UniRef50_Q17VK6 Cluster: Putative uncharacterized protein Hac pr... 36 1.8
UniRef50_Q13T84 Cluster: Putative uncharacterized protein; n=2; ... 36 1.8
UniRef50_A6G4M7 Cluster: DNA repair protein radA; n=1; Plesiocys... 36 1.8
UniRef50_A0GFK5 Cluster: RAD55; n=2; Burkholderia|Rep: RAD55 - B... 36 1.8
UniRef50_Q4FY15 Cluster: Putative uncharacterized protein; n=3; ... 36 1.8
UniRef50_Q18FI4 Cluster: DNA repair and recombination protein Ra... 36 1.8
UniRef50_A0RYZ3 Cluster: RecA/RadA recombinase related protein; ... 36 1.8
UniRef50_Q2IEE4 Cluster: Protein recA; n=1; Anaeromyxobacter deh... 35 2.4
UniRef50_Q0YMC6 Cluster: ATPase; n=1; Geobacter sp. FRC-32|Rep: ... 35 2.4
UniRef50_A3ZNU6 Cluster: RecA protein; n=1; Blastopirellula mari... 35 2.4
UniRef50_Q389E0 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q2USE9 Cluster: Predicted protein; n=6; Trichocomaceae|... 35 2.4
UniRef50_P35901 Cluster: Protein recA (Recombinase A) [Contains:... 35 2.4
UniRef50_UPI000067400A Cluster: hypothetical protein Bpse4_03000... 35 3.2
UniRef50_Q2IIA2 Cluster: Protein recA; n=2; Anaeromyxobacter|Rep... 35 3.2
UniRef50_A3JHF4 Cluster: Putative superfamily I DNA helicase; n=... 35 3.2
UniRef50_A5K559 Cluster: Putative uncharacterized protein; n=4; ... 35 3.2
UniRef50_Q1DNF7 Cluster: Putative uncharacterized protein; n=1; ... 35 3.2
UniRef50_Q5V0B5 Cluster: Circadian regulator; n=1; Haloarcula ma... 35 3.2
UniRef50_O93773 Cluster: Recombination/repair protein RadA; n=1;... 35 3.2
UniRef50_Q4UL56 Cluster: DNA repair protein radA homolog; n=18; ... 35 3.2
UniRef50_Q7UK01 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_Q034K4 Cluster: Protein recA; n=5; Bacteria|Rep: Protei... 34 4.2
UniRef50_A7CKV4 Cluster: Replicative DNA helicase; n=1; Ralstoni... 34 4.2
UniRef50_A2WXE2 Cluster: Putative uncharacterized protein; n=5; ... 34 4.2
UniRef50_Q2UBC3 Cluster: Pleiotropic drug resistance proteins; n... 34 4.2
UniRef50_A3LTU6 Cluster: Predicted protein; n=1; Pichia stipitis... 34 4.2
UniRef50_A2QYT7 Cluster: Similarity to hypothetical ATP-binding ... 34 4.2
UniRef50_Q5JDP8 Cluster: ATPase, RecA superfamily; n=1; Thermoco... 34 4.2
UniRef50_P65954 Cluster: DNA repair protein radA homolog; n=43; ... 34 4.2
UniRef50_Q9PK96 Cluster: DNA repair protein radA homolog; n=9; C... 34 4.2
UniRef50_Q8DI25 Cluster: Tll1767 protein; n=1; Synechococcus elo... 34 5.6
UniRef50_Q2LQF2 Cluster: MoxR-like ATPase with AAA domain; n=5; ... 34 5.6
UniRef50_Q2JUA6 Cluster: Replicative DNA helicase; n=2; Synechoc... 34 5.6
UniRef50_Q0AUE9 Cluster: DNA repair protein RadA; n=1; Syntropho... 34 5.6
UniRef50_Q7RW81 Cluster: Putative uncharacterized protein NCU038... 34 5.6
UniRef50_Q8RY99 Cluster: DNA repair protein recA homolog 2, mito... 34 5.6
UniRef50_P37572 Cluster: DNA repair protein radA homolog; n=50; ... 34 5.6
UniRef50_Q84GE9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q08N73 Cluster: Protein recA; n=2; Cystobacterineae|Rep... 33 7.4
UniRef50_Q01QX0 Cluster: RecA domain protein; n=1; Solibacter us... 33 7.4
UniRef50_A5CY68 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q95XK7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q0GFE8 Cluster: Eukaryotic translation initiation facto... 33 7.4
UniRef50_A6NFW4 Cluster: Uncharacterized protein ENSP00000365736... 33 7.4
UniRef50_P24517 Cluster: DNA repair protein radA; n=195; Bacteri... 33 7.4
UniRef50_UPI0000DADEB2 Cluster: ABC transporter, ATP-binding pro... 33 9.8
UniRef50_UPI000023D3E1 Cluster: hypothetical protein FG09716.1; ... 33 9.8
UniRef50_Q4RHK8 Cluster: Chromosome 19 SCAF15045, whole genome s... 33 9.8
UniRef50_Q7VHE2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_Q4JXK0 Cluster: DNA repair protein RadA; n=1; Corynebac... 33 9.8
UniRef50_Q0S2T4 Cluster: Probable ATP-dependent DNA helicase; n=... 33 9.8
UniRef50_A4ZRA5 Cluster: Primase/helicase; n=2; unclassified Pod... 33 9.8
UniRef50_A5K180 Cluster: ATP-dependent protease, putative; n=1; ... 33 9.8
UniRef50_Q6C5D7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 33 9.8
UniRef50_A7TGZ2 Cluster: Putative uncharacterized protein; n=1; ... 33 9.8
UniRef50_A6SNV0 Cluster: Putative uncharacterized protein; n=2; ... 33 9.8
UniRef50_Q682D3 Cluster: DNA-repair protein XRCC2 homolog; n=4; ... 33 9.8
UniRef50_Q04761 Cluster: Protein recA; n=310; Bacteria|Rep: Prot... 33 9.8
>UniRef50_UPI0000586FDE Cluster: PREDICTED: similar to
RAD51L2/RAD51C protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD51L2/RAD51C
protein - Strongylocentrotus purpuratus
Length = 425
Score = 155 bits (375), Expect = 2e-36
Identities = 88/224 (39%), Positives = 124/224 (55%), Gaps = 4/224 (1%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E+ QKE LP I TF + LD +L GGV + +TE+ G PG GKTQ C+QLC VQI
Sbjct: 109 TAFEMLQKEQSLPPIITFCEELDEMLG-GGVPMCKITEICGAPGVGKTQTCIQLCVDVQI 167
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKI-EPSYL--FNEEEALDRLHYI 552
P L G+ EA+YIDT +F P R I A+ C + + + L F E+ L +HY
Sbjct: 168 PASLGGVEGEAVYIDTEGSFIPQRAWGIAQAATEHCHTMGDQAELKDFTTEKILSGIHYF 227
Query: 553 NAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQKRTGLLFRQMADLQR 729
+ A +N + FL+++P+VKLI++DSI F F+ + RT LL + R
Sbjct: 228 RCHNHVELLALVNLLPEFLSKNPKVKLIIVDSIAFHFRHDFDDMSLRTRLLNGLAQNFIR 287
Query: 730 IAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAWXHRCNXRVLL 861
IA + +AVVL N+M+T+ ++W H C RV+L
Sbjct: 288 IATQYNLAVVLTNQMTTKIGEGTSHLIPALGESWGHACTIRVIL 331
>UniRef50_Q8GXF0 Cluster: DNA repair protein RAD51 homolog 3; n=5;
Magnoliophyta|Rep: DNA repair protein RAD51 homolog 3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 363
Score = 122 bits (295), Expect = 9e-27
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 10/229 (4%)
Frame = +1
Query: 205 ATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP 384
A ++ +E LP I T +LD+IL GG+ +TE+ G+PG GKTQ+ +QL +VQIP
Sbjct: 92 AWDMLHEEESLPRITTSCSDLDNILG-GGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIP 150
Query: 385 KVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQK----IEPSYLFNE-----EEALD 537
+ GL +A+YIDT +F R +I A + ++ + + N+ E+ L+
Sbjct: 151 RECGGLGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILE 210
Query: 538 RLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQKRTGLLFRQM 714
+ Y + A +N + F++E+ VK++++DSITF F++ + +RT +L
Sbjct: 211 NIFYFRVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYDDLAQRTRVLSEMA 270
Query: 715 ADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAWXHRCNXRVLL 861
++A + +AVVL+N+++T+ D+W H C RV+L
Sbjct: 271 LKFMKLAKKFSLAVVLLNQVTTKFSEGSFQLALALGDSWSHSCTNRVIL 319
>UniRef50_O43502 Cluster: DNA repair protein RAD51 homolog 3; n=32;
Euteleostomi|Rep: DNA repair protein RAD51 homolog 3 -
Homo sapiens (Human)
Length = 376
Score = 121 bits (291), Expect = 3e-26
Identities = 75/235 (31%), Positives = 116/235 (49%), Gaps = 11/235 (4%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
++K TA EL ++E I TF LD IL GGV L TE+ G PG GKTQLC+QL
Sbjct: 81 SHKKCTALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQLCMQLA 139
Query: 367 ASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYL----------F 516
VQIP+ G+ EA++IDT +F R ++ TA + Q I + F
Sbjct: 140 VDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDF 199
Query: 517 NEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQKRT 693
+ L ++Y + A + + FL+EH +V+L+++D I FPF+ + + RT
Sbjct: 200 TLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLDDLSLRT 259
Query: 694 GLLFRQMADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAWXHRCNXRVL 858
LL + +A +AV+L N+M+T+ ++W H R++
Sbjct: 260 RLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLVPALGESWGHAATIRLI 314
>UniRef50_Q00XV2 Cluster: RAD51-like protein 2; n=2;
Ostreococcus|Rep: RAD51-like protein 2 - Ostreococcus
tauri
Length = 570
Score = 118 bits (283), Expect = 3e-25
Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 16/237 (6%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
+A E+ + E P T + LD +L +GG+ G +TE G PG GKTQ+C Q+C S
Sbjct: 87 SAAEVLEDERRRPRTVTCCEALDDVL-DGGIGSGEITEFCGCPGVGKTQMCTQVCVSAST 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNE------------- 522
P+ G + EA+Y+DT +F R ++ +A + +++E +E
Sbjct: 146 PEAFGGTDGEAVYVDTEGSFMADRAMDVASALVEHLRRMEACESDSERRTEMKAALEGYT 205
Query: 523 -EEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI-SVQKRTG 696
E+ L +H + + A + + F+AEHPRV+L+VIDS+ F F++ + RT
Sbjct: 206 AEKILSGIHLFRCHEVTELLAVLETLGEFIAEHPRVRLVVIDSVAFHFRQDFQDMALRTT 265
Query: 697 LLFRQMADLQRIAMEGLIAVVLVNEMSTR-XXXXXXXXXXXXXDAWXHRCNXRVLLS 864
+L + L IA +AVV VN+++ + +++ H C RV+LS
Sbjct: 266 ILSKMTNRLMSIATSRDVAVVTVNQVTVKPQQDGPARLVPALGESYAHACTTRVILS 322
>UniRef50_UPI0000499144 Cluster: DNA repair protein RAD51C; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DNA repair protein
RAD51C - Entamoeba histolytica HM-1:IMSS
Length = 283
Score = 112 bits (269), Expect = 1e-23
Identities = 69/200 (34%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Frame = +1
Query: 193 KIHTATELWQ--KETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
K T EL + KE + +IPTF+Q +D L NGG+ LG +T+++G PG+GK+QLC+Q+
Sbjct: 21 KTKTLKELVEEVKEKKVRNIPTFNQEIDQFL-NGGISLGEITQIVGFPGSGKSQLCMQIA 79
Query: 367 ASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLH 546
+VQ+P+ + GLN+E++Y D+ + F +R + + C P Y N +E L+++H
Sbjct: 80 CNVQLPEEIGGLNSESIYYDSYSQFCISRVQRMAECI---CASY-PEYKLNVKEILEKIH 135
Query: 547 YINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSI-TFPFKEGISVQKRTGLLFRQMADL 723
I C+ + I+ L +VK+I+IDSI TF K + R L R + L
Sbjct: 136 VYQPHDIVSLCSSLLSINNKL---NKVKVIIIDSIPTFYKKAMCNDTIRLAALHRIIQIL 192
Query: 724 QRIAMEGLIAVVLVNEMSTR 783
+ + ++VV+VN ++T+
Sbjct: 193 SIYSNKYYLSVVIVNHLTTK 212
>UniRef50_Q54PJ7 Cluster: Putative DNA repair protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative DNA repair
protein - Dictyostelium discoideum AX4
Length = 381
Score = 111 bits (266), Expect = 3e-23
Identities = 77/251 (30%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Frame = +1
Query: 142 ILNAYKKI*TYPN-MSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTEL 318
I N Y I Y N ++N I L Q +I TF +D +L NGG L +TE+
Sbjct: 31 IFNNY--INNYSNYLNNNGISALDLLIQGRDGNNNIITFCSEIDQML-NGGTPLKKITEI 87
Query: 319 LGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILT-------AS 477
G+PG GKT + QL + IP L G+ +A+YIDT +++ R +E+ T
Sbjct: 88 CGVPGIGKTNMAFQLLVNTSIPFDLGGVQGKAIYIDTEGSYSCQRVREMATHLVNHLECV 147
Query: 478 LLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITF 657
LLK + +Y+ E L+ ++Y + + + ++++ +FL ++ VKLIV+DSIT+
Sbjct: 148 LLKNPMTQTTYIPTVETVLNSIYYYRVYHYIEIISLIHQLPLFLEKNKDVKLIVVDSITY 207
Query: 658 PFK-EGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR--XXXXXXXXXXXXXDA 828
PF+ + + RT L +L IA +AVV++N+++T+ ++
Sbjct: 208 PFRCDFKDMGLRTRSLLSLAQNLMNIATRYNLAVVVMNQVTTKISPNQKESILVPYLGES 267
Query: 829 WXHRCNXRVLL 861
W H C R++L
Sbjct: 268 WTHICTYRMVL 278
>UniRef50_Q8SZ30 Cluster: RE19845p; n=2; Sophophora|Rep: RE19845p -
Drosophila melanogaster (Fruit fly)
Length = 270
Score = 109 bits (261), Expect = 1e-22
Identities = 64/193 (33%), Positives = 93/193 (48%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GG+ LG L EL+G GTGKTQ+CLQLC +VQIPK GL AL+IDT +F P R +
Sbjct: 59 GGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGLEGSALFIDTRQDFHPDRLMGL 118
Query: 466 LTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVID 645
A L+ Q F + L ++HY+ +++ A + L +HP +KLIVID
Sbjct: 119 --ALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATVLSCHRHLVDHPDIKLIVID 176
Query: 646 SITFPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXD 825
S+ F + R +L ++R+ + + V N ++ R D
Sbjct: 177 SLAFTLRMLEDGAHRYEMLLELHESMRRLQRQHELTWVFTNVLTHRYVKQKFQVEPALGD 236
Query: 826 AWXHRCNXRVLLS 864
H N R+ S
Sbjct: 237 LHSHLINERIWFS 249
>UniRef50_Q93YY9 Cluster: RAD51C protein; n=1; Chlamydomonas
reinhardtii|Rep: RAD51C protein - Chlamydomonas
reinhardtii
Length = 352
Score = 108 bits (260), Expect = 2e-22
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 18/248 (7%)
Frame = +1
Query: 175 PNMSNYKIHT--ATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQ 348
P SN++ T A +L P I + +++LD +L GGV G +TE G+PG GKTQ
Sbjct: 68 PASSNWRAGTVSAADLLVAAAATPRIISMARDLDALLG-GGVAAGQVTEFCGVPGVGKTQ 126
Query: 349 LCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKI--------EP 504
L +QL +VQIP+ LSG +A+YIDT +F R +I ++ Q I +P
Sbjct: 127 LGMQLAVNVQIPRSLSGPEGQAVYIDTEGSFMAERCADIAEGAVRHVQSILEKKASMGQP 186
Query: 505 SYL------FNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK 666
L F E + ++ + +N + FL ++ +V+LIVIDS+TF F+
Sbjct: 187 ELLHDGERPFTLENVMRGIYLFRVHDHVEQLGLVNMLPRFLEQYSQVRLIVIDSVTFHFR 246
Query: 667 EGI-SVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR-XXXXXXXXXXXXXDAWXHR 840
+ + +RT ++ L +A +AVVL+N+++T+ ++W H
Sbjct: 247 QDFPDMAQRTRVVTGMAQQLISLAQTHNVAVVLMNQVTTKVLEGGGSKLVPALGESWGHA 306
Query: 841 CNXRVLLS 864
+ RV+L+
Sbjct: 307 ASTRVMLT 314
>UniRef50_A0NCA9 Cluster: ENSANGP00000029732; n=2; Culicidae|Rep:
ENSANGP00000029732 - Anopheles gambiae str. PEST
Length = 290
Score = 107 bits (256), Expect = 5e-22
Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 10/204 (4%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
+A + W++E + TF ++LD L +G + G +TEL G PG+GKTQLCLQL +VQI
Sbjct: 5 SALDWWREEEARTGLVTFCRDLDLALGSG-IPEGMITELCGPPGSGKTQLCLQLAVNVQI 63
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKC------QKIEPSYL---FNEEEAL 534
P+ L GL A+Y+DTN F P R +E+ A C K+ P F+E AL
Sbjct: 64 PQQLGGLQGRAVYLDTNYGFFPQRVQEMAKACHNHCANIALLHKLNPEETLAGFSEATAL 123
Query: 535 DRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKE-GISVQKRTGLLFRQ 711
D + Y + + + + L + ++KLIV+DS++F + KR +
Sbjct: 124 DNILYSHVTNCTQILEAIAVLQNRLYDGEKIKLIVLDSLSFLIRNTNTRSMKRVKRVHEI 183
Query: 712 MADLQRIAMEGLIAVVLVNEMSTR 783
+ L ++A V++ N+++TR
Sbjct: 184 LTLLHKLAHRFGCVVIVTNDVTTR 207
>UniRef50_UPI0000E249BA Cluster: PREDICTED: RAD51 homolog C; n=1;
Pan troglodytes|Rep: PREDICTED: RAD51 homolog C - Pan
troglodytes
Length = 461
Score = 81.4 bits (192), Expect(2) = 6e-21
Identities = 53/151 (35%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA EL ++E I TF LD IL GGV L TE+ G PG GKTQLC+QL VQI
Sbjct: 131 TALELLEQEHTQGFIITFCSALDDILG-GGVPLMKTTEICGAPGVGKTQLCMQLAVDVQI 189
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYL----------FNEEEA 531
P+ G+ EA++IDT +F R ++ TA + Q I + F +
Sbjct: 190 PECFGGVAGEAVFIDTEGSFMVDRVVDLATACIEHLQLIAEKHKGEEHQKALEDFTLDNI 249
Query: 532 LDRLHYINAFGIEKFCACMNRISVFLAEHPR 624
L ++Y + A + + FL+EH +
Sbjct: 250 LSHIYYFRCRDYTELLAQVYLLPDFLSEHSK 280
Score = 42.7 bits (96), Expect(2) = 6e-21
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 625 VKLIVIDSITFPFKEGIS-VQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTRXXXXXX 801
V+L+++D I FPF+ + + RT LL + +A +AV+L N+M+T+
Sbjct: 321 VRLVIVDGIAFPFRHDLDDLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQA 380
Query: 802 XXXXXXXDAWXHRCNXRVL 858
++W H R++
Sbjct: 381 LLVPALGESWGHAATIRLI 399
>UniRef50_Q657A2 Cluster: DNA repair protein radA (RadA)-like; n=3;
Oryza sativa|Rep: DNA repair protein radA (RadA)-like -
Oryza sativa subsp. japonica (Rice)
Length = 309
Score = 94.7 bits (225), Expect = 3e-18
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Frame = +1
Query: 322 GLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI---LTASLLK-- 486
G+PG GKTQL +QL +VQIP GL +A+YIDT +F R +I + +L+
Sbjct: 75 GVPGVGKTQLGIQLAINVQIPVEYGGLGGKAVYIDTEGSFMVERVYQIAEGCISDILEYF 134
Query: 487 --CQKIEPS--YLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT 654
C P+ E L ++Y + A +N + FL EH V++++IDS+T
Sbjct: 135 PHCHDKAPAGQEKLKPESFLADIYYFRICSYTEQIAVINYLEKFLGEHKDVRIVIIDSVT 194
Query: 655 FPFKEGI-SVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAW 831
F F++ + RT +L L +++ +AVVL+N+++T+ D+W
Sbjct: 195 FHFRQDFDDMALRTRVLSGLSLKLMKLSKAYNLAVVLLNQVTTKFTEGSFQLTLALGDSW 254
Query: 832 XHRCNXRVLL 861
H C R++L
Sbjct: 255 SHSCTNRLIL 264
>UniRef50_Q55075 Cluster: DNA repair and recombination protein radA;
n=12; Archaea|Rep: DNA repair and recombination protein
radA - Sulfolobus solfataricus
Length = 324
Score = 94.3 bits (224), Expect = 4e-18
Identities = 63/203 (31%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Frame = +1
Query: 193 KIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
+ TA E+ ++ + I T SQ LD +LA GG++ ++TE G G+GKTQLC QL +
Sbjct: 72 RFKTALEVKKERMNVKKISTGSQALDGLLA-GGIETRTMTEFFGEFGSGKTQLCHQLSVN 130
Query: 373 VQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYI 552
VQ+P GL+ +A+YIDT F R + + A L + ++ ++YI
Sbjct: 131 VQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNV-----------MNNIYYI 179
Query: 553 NAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT------FPFKEGISVQKRTGLLFRQM 714
A + A ++ + +++ P +KLIV+DS+T +P +E ++V+++ L + +
Sbjct: 180 RAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQK--LNKHL 237
Query: 715 ADLQRIAMEGLIAVVLVNEMSTR 783
L R+A IAV++ N++ R
Sbjct: 238 HQLTRLAEVYDIAVIITNQVMAR 260
>UniRef50_Q8ZYR9 Cluster: DNA repair and recombination protein radA;
n=19; Archaea|Rep: DNA repair and recombination protein
radA - Pyrobaculum aerophilum
Length = 333
Score = 92.3 bits (219), Expect = 2e-17
Identities = 60/195 (30%), Positives = 105/195 (53%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
+A E++++ + I T ++LD +L GG++ ++TE++G G+GKTQLC QL VQ+
Sbjct: 88 SALEVYERRKKIRRISTGVRSLDELLG-GGIETRAVTEIVGEFGSGKTQLCHQLAVMVQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P+ GL A+A+YIDT F P R +I A L + ++AL + Y A+
Sbjct: 147 PEERGGLGAKAIYIDTENTFRPERIMQIAKARGL-----------DSDQALHNIFYARAY 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI----SVQKRTGLLFRQMADLQR 729
+ + + + +H V L+V+DS+ F+ ++ +R L + +ADL R
Sbjct: 196 SSDHQMILVEQAKSIIKQH-NVALLVVDSVIAHFRSEFPGRENLAERQQKLNKHVADLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A +AVV+ N++
Sbjct: 255 LADAYDVAVVITNQV 269
>UniRef50_UPI000065EE6A Cluster: DNA-repair protein XRCC3 (X-ray
repair cross-complementing protein 3).; n=1; Takifugu
rubripes|Rep: DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3). - Takifugu rubripes
Length = 346
Score = 85.0 bits (201), Expect = 2e-15
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 3/169 (1%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ +G +TEL G G GKTQL LQLC VQ P GL++ A+YI T +F R
Sbjct: 92 LLRGGLPVGRITELSGQSGAGKTQLALQLCLCVQYPTDYGGLDSGAVYICTENSFPIRRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++T + + PS L + + D ++ + ++ C++R L +L+
Sbjct: 152 QQLVTDQYVMRSDVPPS-LISTLKFSDHVYVEHTADLDSLQVCLSRRVPLLLARGLARLV 210
Query: 637 VIDSITFPFK---EGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
V+DS+ F+ + Q+RT + + L R++ E V+ +N++
Sbjct: 211 VLDSLAALFRCEFQAAEWQERTRQMLNVSSTLHRLSQEFSTTVLCINQV 259
>UniRef50_P25454 Cluster: DNA repair protein RAD51; n=111;
Eukaryota|Rep: DNA repair protein RAD51 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 400
Score = 82.6 bits (195), Expect = 1e-14
Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA + + + L + T S+NLD +L GGV+ GS+TEL G TGK+QLC L + QI
Sbjct: 146 TAADFHMRRSELICLTTGSKNLDTLLG-GGVETGSITELFGEFRTGKSQLCHTLAVTCQI 204
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + G + LYIDT F P R S+ + ++P ++AL+ + Y A+
Sbjct: 205 PLDIGGGEGKCLYIDTEGTFRPVRL-----VSIAQRFGLDP------DDALNNVAYARAY 253
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ ++ + ++E R LIV+DS+ ++ S + R L + M LQR
Sbjct: 254 NADHQLRLLDAAAQMMSE-SRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQR 312
Query: 730 IAMEGLIAVVLVNEM 774
+A + +AVV+ N++
Sbjct: 313 LADQFGVAVVVTNQV 327
>UniRef50_Q06609 Cluster: DNA repair protein RAD51 homolog 1; n=22;
Eukaryota|Rep: DNA repair protein RAD51 homolog 1 - Homo
sapiens (Human)
Length = 339
Score = 82.6 bits (195), Expect = 1e-14
Identities = 63/195 (32%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ+C L + Q+
Sbjct: 88 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQICHTLAVTCQL 146
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G +A+YIDT F P R LL + Y + + LD + Y AF
Sbjct: 147 PIDRGGGEGKAMYIDTEGTFRPER--------LL---AVAERYGLSGSDVLDNVAYARAF 195
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + S + E R L+++DS T ++ S + R L R + L R
Sbjct: 196 NTDHQTQLLYQASAMMVE-SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLR 254
Query: 730 IAMEGLIAVVLVNEM 774
+A E +AVV+ N++
Sbjct: 255 LADEFGVAVVITNQV 269
>UniRef50_Q386Q5 Cluster: Recombinase Rad51, putative; n=1;
Trypanosoma brucei|Rep: Recombinase Rad51, putative -
Trypanosoma brucei
Length = 507
Score = 82.2 bits (194), Expect = 2e-14
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Frame = +1
Query: 196 IHTATELWQKETC--LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCA 369
I T EL E + ++ T ++LD IL GG+Q+G+LTE+ G PG GKTQL +QL
Sbjct: 88 IRTLRELLDAEATKGIENVTTLCRSLD-ILLGGGLQVGTLTEICGPPGVGKTQLSMQLAV 146
Query: 370 SVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
+ +PK L GL L+IDT +F P RF+EI +A++
Sbjct: 147 NCVLPKELGGLQGGCLFIDTEGSFLPERFREIASAAV 183
Score = 46.0 bits (104), Expect = 0.001
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +1
Query: 514 FNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK 666
F + L R Y+ + A +N + ++A HP +++++IDSI FPF+
Sbjct: 259 FTVDYILQRTQYVRVLDVVSLMALLNGLPAYIASHPGIRMVIIDSIAFPFR 309
>UniRef50_UPI000023E7C1 Cluster: hypothetical protein FG00844.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00844.1 - Gibberella zeae PH-1
Length = 445
Score = 81.8 bits (193), Expect = 2e-14
Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 9/189 (4%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T LD IL GGV +G++TE G G GKTQ L LC +VQ+P GL EALYI
Sbjct: 89 ISTLDDGLDAILG-GGVPVGAVTEFTGESGAGKTQALLSLCLAVQLPSP-HGLGREALYI 146
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMN-RIS 600
T +R A +LK I Y ++ +LD +H +E ++ ++
Sbjct: 147 STEATMATSRL-----AQMLKSNPIIQQYDVDDRPSLDAIHSTITPDLETQDHILDFQVP 201
Query: 601 VFLAEHPRVKLIVIDSITFPFK--------EGISVQKRTGLLFRQMADLQRIAMEGLIAV 756
V L+ H R+ LI++DS+ ++ G ++ R+ L R A L+ +A +AV
Sbjct: 202 VLLSRH-RIGLIILDSVAANYRAEFERQGTHGSNMAARSAELVRLGALLRDLARRHNVAV 260
Query: 757 VLVNEMSTR 783
V+ N+++ R
Sbjct: 261 VVANQVADR 269
>UniRef50_Q8TVF0 Cluster: RadA recombinase; n=1; Methanopyrus
kandleri|Rep: RadA recombinase - Methanopyrus kandleri
Length = 317
Score = 80.6 bits (190), Expect = 5e-14
Identities = 59/181 (32%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T S LD IL GGV G LTE G G+GK+Q+ QLC +VQ+P+ GL ++A++I
Sbjct: 77 ITTGSSALDEILG-GGVPCGELTEFAGPFGSGKSQIVFQLCVNVQLPEEEGGLESKAIFI 135
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT +P R K + + ++P EAL + +E+
Sbjct: 136 DTEGTVSPGRIK-----GMAEALGLDPG------EALRNVFVTQVRSVEEQMRAAEEAHK 184
Query: 604 FLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQRIAMEGLIAVVLVNE 771
L E + L+VIDS+T F+ S V +R L + + L+ +AM+ +AVV N+
Sbjct: 185 -LCEREDIGLVVIDSLTAHFRAEYSKLGDVSERQARLMKHVDQLRNLAMDHDVAVVFTNQ 243
Query: 772 M 774
+
Sbjct: 244 V 244
>UniRef50_O61128 Cluster: Dmc1 homolog; n=11; Eukaryota|Rep: Dmc1
homolog - Leishmania major
Length = 364
Score = 79.8 bits (188), Expect = 9e-14
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
T + Q+ + L I T S LD +L GG++ S+TE G TGKTQ+ LC + Q+
Sbjct: 112 TGSSCLQQRSTLLRISTGSTALDQLLGGGGIESRSITEAFGEFRTGKTQIGHTLCVTCQL 171
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + G N +A+Y+DT F P R + I + + LD + A+
Sbjct: 172 PLEMGGGNGKAVYVDTEGTFRPERIR-----------PIAERFGMDSNSVLDNILVARAY 220
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
E ++ ++ +AE + L+V+DSIT F+ S + +R L + ++ L +
Sbjct: 221 THEHQAHLLSMVAAKMAE-DQFSLLVVDSITALFRVDFSGRGELAERQQKLAKMLSQLIK 279
Query: 730 IAMEGLIAVVLVNEM 774
IA E IAV + N++
Sbjct: 280 IAEEFNIAVYITNQV 294
>UniRef50_A1RY65 Cluster: Rad51-like; n=1; Thermofilum pendens Hrk
5|Rep: Rad51-like - Thermofilum pendens (strain Hrk 5)
Length = 250
Score = 78.6 bits (185), Expect = 2e-13
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T ++LD +L GG+++GS+TE +G G GKTQ+C QL VQ+PK GLNA ALY+
Sbjct: 30 ISTGVRSLDDLL-EGGIEVGSITEFIGEFGAGKTQICHQLSVMVQLPKDKGGLNARALYV 88
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT F P R +I A + ++P E+ L+ + Y A+ + +++
Sbjct: 89 DTEGTFRPERIVQIARA-----RGLDP------EKTLENIIYARAYSLGGLEELLSKALA 137
Query: 604 FLAEHPRVKLIVIDSITFPFK-EGISVQKRTGLLFRQMADLQRIAMEGLIAVV 759
+ + V L+V+D T + G+ +R ++ L+ +A G VV
Sbjct: 138 EVVKGD-VGLVVLDEATRLVRASGLGAGERARAYAAIVSSLEAVAEAGSAVVV 189
>UniRef50_Q7ZTX4 Cluster: Zgc:56581; n=6; Euteleostomi|Rep:
Zgc:56581 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 373
Score = 76.6 bits (180), Expect = 8e-13
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA +LW+++ L T LD +L +GG+ G+LTE+ G G GKTQLC+ L +
Sbjct: 66 TALDLWKRKEEL-CFSTSLPALDRLL-HGGLPRGALTEVTGPSGCGKTQLCMMLSVLATL 123
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
PK L GL++ +YIDT + F+ R E+ + + ++ L E R+H
Sbjct: 124 PKSLGGLDSGVIYIDTESAFSAERLVEMAQSRFPEFFSVKERLL----EMAARVHLFREL 179
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI------SVQKRTGLLFRQMADL 723
+ + R+ + R L+++DS+ ++ ++ R+ L ++ A L
Sbjct: 180 TCQDVLKRLERLEEDIIA-CRAGLVILDSVASVVRKEFDTSLPGNLTHRSNFLGQEAAVL 238
Query: 724 QRIAMEGLIAVVLVNEMST 780
+ ++ E I VVL N+++T
Sbjct: 239 KYLSQEFCIPVVLTNQITT 257
>UniRef50_Q4E2R1 Cluster: DNA recombination and repair protein
RAD51, putative; n=1; Trypanosoma cruzi|Rep: DNA
recombination and repair protein RAD51, putative -
Trypanosoma cruzi
Length = 492
Score = 76.6 bits (180), Expect = 8e-13
Identities = 33/85 (38%), Positives = 58/85 (68%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+ TF + +D +L GG+ +G+++E+ G PG GKTQ+ +QL + +P+ L GL+ L+I
Sbjct: 123 VTTFCRGIDTLLG-GGLPVGAVSEVCGAPGVGKTQMLMQLAVNCLLPRELGGLHGSCLFI 181
Query: 424 DTNTNFTPTRFKEILTASLLKCQKI 498
DT +F P RF+EI A++++ ++I
Sbjct: 182 DTEGSFVPERFREIAHAAVMQVKEI 206
Score = 41.9 bits (94), Expect = 0.021
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +1
Query: 514 FNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK 666
F + L + Y+ + A +N + +LA H V+++VIDSI FPF+
Sbjct: 269 FTVDYVLQQTQYLRVVDVVSLMALLNVLPTYLASHSDVRMVVIDSIAFPFR 319
>UniRef50_A4S2Y8 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 351
Score = 76.2 bits (179), Expect = 1e-12
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 3/183 (1%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+P +++D L GG+++G++TE++G G GKTQLCL CAS P + G + +Y+
Sbjct: 80 VPLVIEDVDKALG-GGLRVGAVTEVVGAAGAGKTQLCLAACASAAAPARVGGRDGGVIYV 138
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
D F+ R EI + E S R+H + + ++ +
Sbjct: 139 DAERKFSGARLAEIAREKFPGAFEDEESV----HALARRVHVVTPTSLTDLNKRLDALEE 194
Query: 604 FLAEHPRVKLIVIDSITFPFKEGISVQK---RTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
+ +H +V+L++IDSI + +K R L + L+R A + +AV+ VN++
Sbjct: 195 AIIDH-KVRLVIIDSIAHLARAEFGREKVVQRQSALGAVASTLKRHAEKHALAVLAVNQV 253
Query: 775 STR 783
+T+
Sbjct: 254 TTK 256
>UniRef50_O75771 Cluster: DNA repair protein RAD51 homolog 4; n=42;
Euteleostomi|Rep: DNA repair protein RAD51 homolog 4 -
Homo sapiens (Human)
Length = 328
Score = 75.8 bits (178), Expect = 1e-12
Identities = 62/205 (30%), Positives = 108/205 (52%), Gaps = 7/205 (3%)
Frame = +1
Query: 184 SNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
S + ++ A + +T + T +LD +L + G+ G +TE++G PG+GKTQ+CL +
Sbjct: 62 SAFPVNGADLYEELKTSTAILSTGIGSLDKLL-DAGLYTGEVTEIVGGPGSGKTQVCLCM 120
Query: 364 CASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRL 543
A+ V GL LY+D+N T +R ++L A K Q E + EAL R+
Sbjct: 121 AAN-----VAHGLQQNVLYVDSNGGLTASRLLQLLQA---KTQDEE-----EQAEALRRI 167
Query: 544 HYINAFGIEKFCACMNRISVFLAEH-----PRVKLIVIDSITFPFKEGISVQKRTGL-LF 705
++AF I + + + +A+ VK++V+DS+T + Q+R GL L
Sbjct: 168 QVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQQREGLALM 227
Query: 706 RQMA-DLQRIAMEGLIAVVLVNEMS 777
Q+A +L+ +A + +AVV+ N ++
Sbjct: 228 MQLARELKTLARDLGMAVVVTNHIT 252
>UniRef50_O15315 Cluster: DNA repair protein RAD51 homolog 2; n=27;
Deuterostomia|Rep: DNA repair protein RAD51 homolog 2 -
Homo sapiens (Human)
Length = 384
Score = 74.5 bits (175), Expect = 3e-12
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GGV GSLTE+ G PG GKTQ C+ + +P + GL +YIDT + F+
Sbjct: 90 LDEAL-HGGVACGSLTEITGPPGCGKTQFCIMMSILATLPTNMGGLEGAVVYIDTESAFS 148
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE--H 618
R EI + P Y EE+ L ++ + + RI E
Sbjct: 149 AERLVEIAESRF-------PRYFNTEEKLLLTSSKVHLYRELTCDEVLQRIESLEEEIIS 201
Query: 619 PRVKLIVIDSITFPFKEGISVQ------KRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+KL+++DS+ ++ Q +R L R+ + L+ +A E I V+L N+++T
Sbjct: 202 KGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKYLAEEFSIPVILTNQITT 261
>UniRef50_UPI0000E47207 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 355
Score = 74.1 bits (174), Expect = 4e-12
Identities = 52/174 (29%), Positives = 90/174 (51%), Gaps = 3/174 (1%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD L +GG+ + +TE+ G GKTQLCLQLC + Q+P GL +YI T F
Sbjct: 88 LDEFL-HGGILVKGITEIAGQSAAGKTQLCLQLCLTAQLPVQQGGLANGVVYICTEDVFP 146
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPR 624
R ++++++ ++I P+ L + D ++ +A ++ C+ + L
Sbjct: 147 SKRLQQLISSF---NRRIGPA-LAKQLAVGDHIYVEHAAEKDQLWHCLEKRLPLLLSRGM 202
Query: 625 VKLIVIDSITFPFKEGISVQ---KRTGLLFRQMADLQRIAMEGLIAVVLVNEMS 777
VKL V+DS+ F+ ++ +R L R A L R++ + +AVV VN+++
Sbjct: 203 VKLAVVDSLAAIFRSEFELRDTIRRARELQRVGAHLHRLSSQFNVAVVCVNQVT 256
>UniRef50_Q1DS44 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 591
Score = 74.1 bits (174), Expect = 4e-12
Identities = 63/189 (33%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEA 414
L SI T LD +L+ GG+ G +TE+ G G+GKTQL L L SVQ+P GL A
Sbjct: 105 LSSISTLDPLLDDVLS-GGILTGYVTEIAGESGSGKTQLLLHLLLSVQLPPPY-GLRKNA 162
Query: 415 LYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNR 594
LYI T + R ++L L E + +LD + I +E +N
Sbjct: 163 LYISTEADLATNRLSQLLDGHPLLISLPEDV----QRPSLDNVLSITTVDLETQDHILNY 218
Query: 595 ISVFLAEHPRVKLIVIDSITFPFKEGISVQKRTGLL-----FRQMADLQR-IAMEGLIAV 756
V L+VIDSIT ++ S GLL +++ L R +A+ IAV
Sbjct: 219 HVPAAISRYNVGLVVIDSITANYRVESSTNNVCGLLDRAWELKRLGQLLRNLAVTHNIAV 278
Query: 757 VLVNEMSTR 783
V+ N++S R
Sbjct: 279 VVANQISDR 287
>UniRef50_UPI0000D55904 Cluster: PREDICTED: similar to Meiotic
recombination protein DMC1/LIM15 homolog; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Meiotic
recombination protein DMC1/LIM15 homolog - Tribolium
castaneum
Length = 356
Score = 73.7 bits (173), Expect = 6e-12
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 6/185 (3%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP-KVLSGLNAEALY 420
I T S NLD +L GGV+ S+T++ G G+GKTQ+ LC + QIP + SG + ++
Sbjct: 113 ISTGSANLDKLLG-GGVESMSITQVFGEAGSGKTQIAHTLCVTTQIPTEDYSG--GKVMF 169
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRIS 600
IDT +F P R ++I + +E+ L + YI A+ E + ++
Sbjct: 170 IDTERSFRPNRIRQIAR-----------RFHLSEDSVLQNILYIRAYNSEHQYQILKNVA 218
Query: 601 VFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQRIAMEGLIAVVLV 765
V E V KL+++DSI F+ + R L M+ L++I+ E +AV +
Sbjct: 219 VKFHEDTGVFKLLIVDSIIALFRNDFMGRGVLLNRQQKLAETMSLLKKISEEYNVAVFIT 278
Query: 766 NEMST 780
N+++T
Sbjct: 279 NQVTT 283
>UniRef50_Q8SZF1 Cluster: RE02671p; n=3; Sophophora|Rep: RE02671p -
Drosophila melanogaster (Fruit fly)
Length = 341
Score = 73.7 bits (173), Expect = 6e-12
Identities = 59/168 (35%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GGV +TEL G G GKT+L LQL VQ+P+ L GL YI T ++F R ++
Sbjct: 101 GGVVTRGITELCGAAGVGKTELLLQLSLCVQLPRELGGLGKGVAYICTESSFPARRLLQM 160
Query: 466 LTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCAC-MNRISVFLAEHPRVKLIVI 642
A C+K P N L + N E AC +NRI + +H + LI+I
Sbjct: 161 SKA----CEKRHPEMELN---FLGNIFVENHIEAEPLLACVINRIPRLMQQH-GIGLIII 212
Query: 643 DSITFPFKEGISVQKRTGLLFRQMAD-LQRIAMEGLIAVVLVNEMSTR 783
DS+ F+ +R + R++AD L A + AVV VN+++TR
Sbjct: 213 DSVAAIFRLYNDYLERARHM-RRLADALLSYADKYNCAVVCVNQVATR 259
>UniRef50_Q6CMV0 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57 DNA repair protein; n=1;
Kluyveromyces lactis|Rep: Similar to sp|P25301
Saccharomyces cerevisiae YDR004w RAD57 DNA repair
protein - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 480
Score = 73.7 bits (173), Expect = 6e-12
Identities = 62/210 (29%), Positives = 108/210 (51%), Gaps = 9/210 (4%)
Frame = +1
Query: 181 MSNYKIHTATELWQKETCLPS-IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCL 357
+++ KI T L KE P T + LD +L GG+ +TE+ G TGK+QL L
Sbjct: 69 LADIKIQDITTL--KEDDKPRCFTTGNLGLDKLLG-GGIYSKGITEIFGESSTGKSQLLL 125
Query: 358 QLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALD 537
QL SVQ+P+ ++GLN +++YI T + R K I+ S L K E ++ +
Sbjct: 126 QLALSVQLPEDMNGLNGQSVYITTEGDLPTRRLKSIIEQSSL--FKDEGGDCLVSQKKIF 183
Query: 538 RLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGISVQKRT-------G 696
+ N + ++ + ++ V L HP +KL++IDSI+ + + +Q +T
Sbjct: 184 TV-TCNDWANQEHVTTV-QLPVLLERHPSIKLVIIDSISHHLR--VELQSKTFQESRSNR 239
Query: 697 LLFRQMAD-LQRIAMEGLIAVVLVNEMSTR 783
+ MA+ L +A + +A+V+ N++S +
Sbjct: 240 YIIDSMAENLLSLAQKHNLAIVVANQVSDK 269
>UniRef50_O43542 Cluster: DNA-repair protein XRCC3; n=19;
Euteleostomi|Rep: DNA-repair protein XRCC3 - Homo
sapiens (Human)
Length = 346
Score = 73.7 bits (173), Expect = 6e-12
Identities = 42/130 (32%), Positives = 65/130 (50%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ L +TEL G GKTQL LQLC +VQ P+ GL A A+YI T F R
Sbjct: 92 LLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYICTEDAFPHKRL 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++++ A + + P L + ++ + ++ C+N+ L +L+
Sbjct: 152 QQLM-AQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPVLLSRGMARLV 210
Query: 637 VIDSITFPFK 666
VIDS+ PF+
Sbjct: 211 VIDSVAAPFR 220
>UniRef50_A2XZT8 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 353
Score = 73.3 bits (172), Expect = 7e-12
Identities = 45/136 (33%), Positives = 71/136 (52%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+ T + LD L +GG+ G LTE++G G GKTQ CL+L +P+ GLN LYI
Sbjct: 82 LATTLRGLDEAL-HGGIPAGKLTEVVGPSGIGKTQFCLKLALLATLPECYGGLNGRVLYI 140
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT + F+ R EI S + + E ++ R+ + + +F + ++ V
Sbjct: 141 DTESKFSSRRMIEIGEKSFPQIFRQEGL----AQKMAGRILVLRPTSLSEFTKSLEQMKV 196
Query: 604 FLAEHPRVKLIVIDSI 651
L +H VKL+V+DS+
Sbjct: 197 TLLQHD-VKLLVVDSM 211
>UniRef50_Q27297 Cluster: DNA repair protein Rad51 homolog; n=12;
Fungi/Metazoa group|Rep: DNA repair protein Rad51
homolog - Drosophila melanogaster (Fruit fly)
Length = 336
Score = 73.3 bits (172), Expect = 7e-12
Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
+A +Q + + T S+ LD +L GG++ GS+TE+ G GKTQLC L + Q+
Sbjct: 85 SARTFYQMRADVVQLSTGSKELDKLLG-GGIETGSITEIFGEFRCGKTQLCHTLAVTCQL 143
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P G + +YIDT F P R L A I Y NE E LD + + A
Sbjct: 144 PISQKGGEGKCMYIDTENTFRPER----LAA-------IAQRYKLNESEVLDNVAFTRAH 192
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK-------EGISVQKRTGLLFRQMAD 720
++ + + L E R L+++DS ++ E + Q GL R
Sbjct: 193 NSDQQTKLIQMAAGMLFE-SRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRM--- 248
Query: 721 LQRIAMEGLIAVVLVNEMS 777
LQR+A E +AVV+ N+++
Sbjct: 249 LQRLADEFGVAVVITNQVT 267
>UniRef50_Q9FKM5 Cluster: DNA-repair protein XRCC3 homolog; n=18;
core eudicotyledons|Rep: DNA-repair protein XRCC3
homolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 304
Score = 72.9 bits (171), Expect = 1e-11
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 8/207 (3%)
Frame = +1
Query: 181 MSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQ 360
M N KI L + T + T + LD L GG+ SLTE++ G GKTQLCLQ
Sbjct: 1 MQNGKIKPENLLRRSPTNR-KLTTGCEILDGCL-RGGISCDSLTEIVAESGCGKTQLCLQ 58
Query: 361 LCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDR 540
L Q+P GLN +LY+ ++ F P F+ + S Q Y + D
Sbjct: 59 LSLCTQLPISHGGLNGSSLYL--HSEF-PFPFRRLHQLSHTFHQSNPSIYANYNDNPCDH 115
Query: 541 LHYINAFGIEKFCACMNRISVFLAEHPR---VKLIVIDSITFPFKEGI-----SVQKRTG 696
+ N ++ M RI F+ +KLIV+DS+ F+ ++KR+
Sbjct: 116 VFVQNVHSVDHLFDIMPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSS 175
Query: 697 LLFRQMADLQRIAMEGLIAVVLVNEMS 777
L F+ L+++A + +A+V+ N+++
Sbjct: 176 LFFKISGKLKQLASKFDLAIVITNQVT 202
>UniRef50_UPI0000F2B25B Cluster: PREDICTED: similar to RAD51-like 1
(S. cerevisiae),; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to RAD51-like 1 (S. cerevisiae), -
Monodelphis domestica
Length = 396
Score = 71.7 bits (168), Expect = 2e-11
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Frame = +1
Query: 193 KIHTATELWQKETCLPS---IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
++ TA E+ +++ PS + T +LD L +GGV GSLTE+ G G GKTQ C+ +
Sbjct: 63 QMQTAYEMKLEKSGGPSSAFLATTLISLDEAL-HGGVACGSLTEITGPSGCGKTQFCMMM 121
Query: 364 CASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRL 543
+P + GL +YIDT + F+ R I PS+ EE+ L
Sbjct: 122 SVLATLPTGMGGLEGAVIYIDTESAFSAERLIRIAEFRF-------PSFFNTEEKLLSMS 174
Query: 544 HYINAFGIEKFCACMNRISVFLAE--HPRVKLIVIDSITFPFKEGISVQ------KRTGL 699
I+ + + RI E RVKL++IDS+ ++ Q +R+
Sbjct: 175 SKIHLYKELTCNEVLKRIESLEEEIISNRVKLLIIDSVASVVRKEFDTQLQGNMRERSNF 234
Query: 700 LFRQMADLQRIAMEGLIAVVLVNEMS 777
L R+ + L+ +A E I V++ N+ S
Sbjct: 235 LAREASLLKYLAEEFSIIVIVTNKYS 260
>UniRef50_A1CPK9 Cluster: DNA repair protein (Rad57), putative; n=6;
Trichocomaceae|Rep: DNA repair protein (Rad57), putative
- Aspergillus clavatus
Length = 886
Score = 71.3 bits (167), Expect = 3e-11
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Frame = +1
Query: 229 TCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNA 408
+C +I T LD +L NGGV +G LTE+ G G+GKTQ L L +VQ+P+ GL
Sbjct: 438 SCWNAISTLDPTLDELL-NGGVPVGYLTEVTGESGSGKTQFLLGLLLAVQLPEP-RGLGK 495
Query: 409 EALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACM 588
A+YI T +R ++L + E + L+ + INA +E +
Sbjct: 496 GAIYISTEAALATSRLSQLLESHPYLSTLPE-----DRAPTLENILSINAMDLETQDHIL 550
Query: 589 N-RISVFLAEHPRVKLIVIDSITFPFKEGISVQKRTGLLFR--QMAD----LQRIAMEGL 747
N ++ V + + V L+VIDSIT ++ + GL R ++A L+ +A
Sbjct: 551 NYQLPVAITRY-NVGLVVIDSITANYRAEHTSHNVQGLSTRSSELAKLGQLLRNLATAHN 609
Query: 748 IAVVLVNEMSTR 783
IA+V+ N++S R
Sbjct: 610 IAIVVANQVSDR 621
>UniRef50_A6QWV8 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 587
Score = 70.9 bits (166), Expect = 4e-11
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEA 414
L + T LD +LA GG+ G +TEL G G GKTQ L L SVQ+P G + +A
Sbjct: 108 LSFVSTLDPVLDRVLA-GGISTGYVTELAGESGCGKTQFLLHLLLSVQLPPPY-GTSQKA 165
Query: 415 LYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMN- 591
LY+ T +N R ++L + E S +L+ + I +E +N
Sbjct: 166 LYLSTESNLPTNRLSQLLEEHPVISTLPEGS----PRPSLENILSITTIDLESQDHILNY 221
Query: 592 RISVFLAEHPRVKLIVIDSITFPFKEGISVQKRTGLLFR--QMAD----LQRIAMEGLIA 753
+I V ++ + + L+VIDSIT ++ + GLL R Q+ L+ +A + IA
Sbjct: 222 QIPVAVSRY-NIGLVVIDSITANYRAESDLDNVAGLLARAWQLKKLGQFLRNLAAKQNIA 280
Query: 754 VVLVNEMSTR 783
+V+ N++S R
Sbjct: 281 IVVANQVSDR 290
>UniRef50_Q96449 Cluster: Meiotic recombination protein DMC1
homolog; n=111; Eukaryota|Rep: Meiotic recombination
protein DMC1 homolog - Glycine max (Soybean)
Length = 345
Score = 70.9 bits (166), Expect = 4e-11
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
N+ T ++ K + I T SQ LD +L GGV+ ++TE G +GKTQL LC
Sbjct: 90 NFGYITGSDALLKRKSVIRITTGSQALDELLG-GGVETSAITEAFGEFRSGKTQLAHTLC 148
Query: 367 ASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLH 546
S Q+P + G N + YIDT F P R I + + LD +
Sbjct: 149 VSTQLPTNMRGGNGKVAYIDTEGTFRPDRI-----------VPIAERFGMDPGAVLDNII 197
Query: 547 YINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQM 714
Y A+ E + ++ ++E P +L+++DS+ F+ S + R L + +
Sbjct: 198 YARAYTYEHQYNLLLGLAAKMSEEP-FRLLIVDSVIALFRVDFSGRGELADRQQKLAQML 256
Query: 715 ADLQRIAMEGLIAVVLVNEM 774
+ L +IA E +AV + N++
Sbjct: 257 SRLIKIAEEFNVAVYMTNQV 276
>UniRef50_Q14565 Cluster: Meiotic recombination protein DMC1/LIM15
homolog; n=36; Fungi/Metazoa group|Rep: Meiotic
recombination protein DMC1/LIM15 homolog - Homo sapiens
(Human)
Length = 340
Score = 70.9 bits (166), Expect = 4e-11
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 5/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E +K + I T SQ D +L GG++ ++TE G TGKTQL LC + Q+
Sbjct: 87 TAFEYSEKRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 145
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + ++IDT F P R ++ I + + + LD + Y A+
Sbjct: 146 PGAGGYPGGKIIFIDTENTFRPDRLRD-----------IADRFNVDHDAVLDNVLYARAY 194
Query: 562 GIEKFCACMNRISVFLAEHPRV-KLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQ 726
E ++ ++ E + KL++IDSI F+ S + +R L + ++ LQ
Sbjct: 195 TSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQ 254
Query: 727 RIAMEGLIAVVLVNEMS 777
+I+ E +AV + N+M+
Sbjct: 255 KISEEYNVAVFVTNQMT 271
>UniRef50_Q9SK02 Cluster: DNA repair protein RAD51 homolog 2; n=6;
Magnoliophyta|Rep: DNA repair protein RAD51 homolog 2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 370
Score = 70.5 bits (165), Expect = 5e-11
Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+PT + LD L GG+ G LTEL+G PG GK+Q C++L S P GL+ +YI
Sbjct: 84 LPTHLKGLDDTLC-GGIPFGVLTELVGPPGIGKSQFCMKLALSASFPVAYGGLDGRVIYI 142
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
D + F+ R E+ S + ++ +E R+ + + F + +
Sbjct: 143 DVESKFSSRRVIEMGLESFPEVFHLKGM----AQEMAGRILVLRPTSLANFTESIQELKN 198
Query: 604 FLAEHPRVKLIVIDSITFPFK-EGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMST 780
+ ++ +VKL+VIDS+T E +R L ++ L+ +A I +V+ N++ +
Sbjct: 199 SILQN-QVKLLVIDSMTALLSGENKPGAQRQPQLGWHISFLKSLAEFSRIPIVVTNQVRS 257
Query: 781 R 783
+
Sbjct: 258 Q 258
>UniRef50_P25453 Cluster: Meiotic recombination protein DMC1; n=39;
Eukaryota|Rep: Meiotic recombination protein DMC1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 334
Score = 70.1 bits (164), Expect = 7e-11
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
S+ T S+ LD IL GG+ S+TE+ G GKTQ+ LC + Q+P+ + G + Y
Sbjct: 95 SLSTGSKQLDSILG-GGIMTMSITEVFGEFRCGKTQMSHTLCVTTQLPREMGGGEGKVAY 153
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRIS 600
IDT F P R K+ I Y + E L + Y A E + ++
Sbjct: 154 IDTEGTFRPERIKQ-----------IAEGYELDPESCLANVSYARALNSEHQMELVEQLG 202
Query: 601 VFLAEHPRVKLIVIDSITFPFKEGI----SVQKRTGLLFRQMADLQRIAMEGLIAVVLVN 768
L+ +LIV+DSI F+ + +R L + + L R+A E +AV L N
Sbjct: 203 EELSSGD-YRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLNRLAEEFNVAVFLTN 261
Query: 769 EMST 780
++ +
Sbjct: 262 QVQS 265
>UniRef50_Q49593 Cluster: DNA repair and recombination protein radA;
n=11; Archaea|Rep: DNA repair and recombination protein
radA - Methanococcus jannaschii
Length = 352
Score = 69.7 bits (163), Expect = 9e-11
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Frame = +1
Query: 181 MSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQ 360
+ N + TE+ + + + T S+NLD IL GG++ S+TE G+ G+GKTQ+ Q
Sbjct: 90 LCNLGFKSGTEVLSQRKNIWKLSTGSKNLDEILG-GGLESQSVTEFAGMFGSGKTQIAHQ 148
Query: 361 LCASVQIPKVLSGLNA---------EALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYL 513
C ++Q P+ + +A +A+YIDT F P R ++ A L
Sbjct: 149 ACVNLQCPERIVADDAIKDEILNEPKAVYIDTEGTFRPERIVQMAEALGL---------- 198
Query: 514 FNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK-EGI---SV 681
+ E L+ + A+ + + + E +KL+++DS+T F+ E I +
Sbjct: 199 -DGNEVLNNIFVARAYNSDMQMLYAENVENLIREGHNIKLVIVDSLTSTFRTEYIGRGKL 257
Query: 682 QKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR 783
+R L R MA L ++A V++ N+++ R
Sbjct: 258 AERQQKLGRHMATLNKLADIYNCVVIVTNQVAAR 291
>UniRef50_O93748 Cluster: DNA repair and recombination protein radA;
n=2; Thermoprotei|Rep: DNA repair and recombination
protein radA - Cenarchaeum symbiosum
Length = 398
Score = 69.7 bits (163), Expect = 9e-11
Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 4/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
+ +E++++ + I T + LD +L GG++ ++TE+ G G+GKTQ C +C + Q
Sbjct: 75 SGSEIYKRRQSIGMITTGTDALDALLG-GGIETQAITEVFGEFGSGKTQFCHTMCVTTQK 133
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
PK GL +YIDT F P R ++ K ++P+ L LD + A+
Sbjct: 134 PKEEGGLGGGVMYIDTEGTFRPER-----VVTIAKANNMDPAKL------LDGIIVARAY 182
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI----SVQKRTGLLFRQMADLQR 729
+ + E +KLI+ DS T F+ ++ R L R + L R
Sbjct: 183 NSSHQVLILEEAGKTIQEE-NIKLIISDSTTGLFRSEYLGRGTLASRQQKLGRYIRLLAR 241
Query: 730 IAMEGLIAVVLVNEMST 780
IA AV+ N++S+
Sbjct: 242 IAETYNCAVLATNQVSS 258
>UniRef50_UPI0000D56C94 Cluster: PREDICTED: similar to RAD51 homolog
C isoform 1; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RAD51 homolog C isoform 1 - Tribolium
castaneum
Length = 221
Score = 69.3 bits (162), Expect = 1e-10
Identities = 55/189 (29%), Positives = 95/189 (50%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA EL + E+ + +F LD +L+ + G +TEL GLPGTG+TQ+CL L
Sbjct: 53 TALELCESESNWKPVTSFIPQLDCLLSKE-IASGVVTELCGLPGTGRTQICLHLAV---- 107
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
G+ E ++I TN N + R KEI +K P + + +L I A
Sbjct: 108 -----GVAGETVFIHTNNNLSVERLKEI-------AEKFVP----DVGALMQKLLCIEAT 151
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGISVQKRTGLLFRQMADLQRIAME 741
+ A + + +L+ + +++L+++DSI +P K+ + +R L++R +L+ +A
Sbjct: 152 NFTELRATVQFLKTWLSNN-QIRLLIVDSIAWPLKQQ-PLMERPHLIYRLFQELRILANL 209
Query: 742 GLIAVVLVN 768
AV + N
Sbjct: 210 HNFAVKISN 218
>UniRef50_Q4Q3T8 Cluster: Recombinase Rad51, putative; n=3;
Leishmania|Rep: Recombinase Rad51, putative - Leishmania
major
Length = 687
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/96 (35%), Positives = 54/96 (56%)
Frame = +1
Query: 193 KIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
++H + Q + + TFS LD +L GGV +G +TE+ G PG GKTQL +QL S
Sbjct: 205 EMHAEFQARQAQGFSTHVTTFSGELDGVLG-GGVPVGGVTEISGPPGVGKTQLLMQLAVS 263
Query: 373 VQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
+P G+ L++DT +F R +++ TA++
Sbjct: 264 CAMPVEFGGMGGACLFVDTEGSFVAERLEQMATAAV 299
>UniRef50_UPI00006CB33C Cluster: hypothetical protein
TTHERM_00459230; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00459230 - Tetrahymena
thermophila SB210
Length = 356
Score = 67.3 bits (157), Expect = 5e-10
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 4/193 (2%)
Frame = +1
Query: 208 TELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPK 387
T + Q+ + + I T S+ LD IL NGG++ S+TE G +GKTQ+ C Q
Sbjct: 99 TTVLQRRSQIRRISTGSKALDDIL-NGGIESQSITEFYGEYRSGKTQIAHTACVLAQSQD 157
Query: 388 VLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGI 567
+ LYIDT F P R CQ I Y E AL + Y A+ +
Sbjct: 158 HCQS-PGKVLYIDTEGTFRPERI----------CQ-IASHYGMEGEYALSNIIYGRAYNV 205
Query: 568 EKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQRIA 735
++ + + + + E L+V+DSI F+ S + +R L + M+ LQR+A
Sbjct: 206 DQQNTLLIKGAQLMVEENCFALLVVDSIMANFRCDFSGRGDLSERQQALGKFMSRLQRMA 265
Query: 736 MEGLIAVVLVNEM 774
E IAV++ N++
Sbjct: 266 AEFNIAVIITNQV 278
>UniRef50_Q8I9U4 Cluster: Recombinase Rad51; n=7; Aconoidasida|Rep:
Recombinase Rad51 - Plasmodium falciparum
Length = 350
Score = 67.3 bits (157), Expect = 5e-10
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Frame = +1
Query: 250 TFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDT 429
T S+ LD +L GG++ G +TEL G TGK+QLC L + Q+P SG + L+IDT
Sbjct: 114 TGSKQLDALL-KGGIETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDT 172
Query: 430 NTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFL 609
F P R ++ K + P+ + L+ + Y A+ + + S +
Sbjct: 173 EGTFRPERI-----VAIAKRYGLHPT------DCLNNIAYAKAYNCDHQTELLIDASAMM 221
Query: 610 AEHPRVKLIVIDSITFPFKEGI----SVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
A+ R L+++DS T ++ + R L R + LQRIA +AV++ N++
Sbjct: 222 AD-ARFALLIVDSATALYRSEYIGRGELANRQSHLCRFLRGLQRIADIYGVAVIITNQV 279
>UniRef50_Q9UUL2 Cluster: DNA repair protein rhp57; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rhp57
- Schizosaccharomyces pombe (Fission yeast)
Length = 354
Score = 67.3 bits (157), Expect = 5e-10
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+ T LD L +GG+ +G LTE+ G G+GK+Q C+QLC VQ+P L G+N A++I
Sbjct: 75 LTTGDVKLDETL-HGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVFI 133
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
T + R E+ + K + + + DR++ I +E +
Sbjct: 134 STESGLETKRLFELARYLPERYPKADKKDIIIKNPG-DRVYTILCPDLESQEHIIQYQLP 192
Query: 604 FLAEHPRVKLIVIDSITFPFKEGI-------------SVQKRTGLLFRQMADLQRIAMEG 744
L ++ L+++DS+ ++ + ++ KR L + L+ +A +
Sbjct: 193 ILFNRDKIGLVILDSVASNYRAELRYNRSKSHFRDLDNIAKRGNQLGKLAMTLRTLAHQH 252
Query: 745 LIAVVLVNEMSTR 783
AVV+ N++S R
Sbjct: 253 EAAVVIANQVSDR 265
>UniRef50_Q3LW29 Cluster: DNA recombination and repair protein; n=1;
Bigelowiella natans|Rep: DNA recombination and repair
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 331
Score = 66.9 bits (156), Expect = 6e-10
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 5/184 (2%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T ++ +D++L GG++ S+TE+ G TGKTQ C LC S + + +YI
Sbjct: 93 ISTLNKTIDNLL-EGGIESSSVTEIFGESKTGKTQFCHILCVSAMVDNYSFVQTKKVIYI 151
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIE-KFCACMNRIS 600
DT NF P R E I + N + ++ + Y AF E +F + S
Sbjct: 152 DTEGNFRPERLIE-----------ISEKFKINFDFLINNVFYARAFNTEHQFQLLVAAAS 200
Query: 601 VFLAEHPRVKLIVIDSITFPFKEGI----SVQKRTGLLFRQMADLQRIAMEGLIAVVLVN 768
+ V LI++DS T + + R LL + + ++QR+ E IA++L N
Sbjct: 201 I--TAFSNVALIIVDSCTALLRTEYVGRGELFLRQTLLGKFLRNIQRLGEECNIAILLTN 258
Query: 769 EMST 780
++ T
Sbjct: 259 QVVT 262
>UniRef50_Q7RD33 Cluster: DNA repair protein rhp51; n=1; Plasmodium
yoelii yoelii|Rep: DNA repair protein rhp51 - Plasmodium
yoelii yoelii
Length = 365
Score = 66.9 bits (156), Expect = 6e-10
Identities = 48/152 (31%), Positives = 68/152 (44%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
T +L QK + + I T S LD L GG + S+TEL G GKTQ+C L + Q+
Sbjct: 95 TGNQLVQKRSKVLKITTGSSVLDKTLG-GGFESMSITELFGENRCGKTQVCHTLAVTAQL 153
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
PK + G N + YIDT F P + C KI + N E+ LD + Y AF
Sbjct: 154 PKSMQGGNGKVCYIDTEGTFRPEKI----------C-KIAQRFGLNSEDVLDNILYARAF 202
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITF 657
E + + + P L+ +T+
Sbjct: 203 THEHLYQLLATSAAKVVHTPACALLTYTLLTY 234
>UniRef50_A2QR86 Cluster: Remark: alternate names = YDR004W; n=1;
Aspergillus niger|Rep: Remark: alternate names = YDR004W
- Aspergillus niger
Length = 516
Score = 66.5 bits (155), Expect = 9e-10
Identities = 57/187 (30%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+I T LD +L +GG+ G +TE+ G G+GKTQ L L + Q+P GL+ A+Y
Sbjct: 78 AISTLDPTLDALL-DGGIPTGYVTEVTGESGSGKTQFLLTLLLAAQLP-APRGLDKCAIY 135
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRIS 600
I T + R + L++ S +L+++ INA +E +N
Sbjct: 136 ISTEAPLSTPRLSQ-----LIEFHPYLSSLSQAHTPSLEKILSINAMDLEAQDHILNYQL 190
Query: 601 VFLAEHPRVKLIVIDSITFPFKEGIS------VQKRTGLLFRQMADLQRIAMEGLIAVVL 762
+ V L+VIDSIT ++ S + R+G L R L+ +A+E +AVV+
Sbjct: 191 PVAIKRYNVGLVVIDSITANYRAEHSSHNLSGLSTRSGELSRLGHMLRNLAVEENVAVVV 250
Query: 763 VNEMSTR 783
N++S R
Sbjct: 251 ANQVSDR 257
>UniRef50_A0NBP3 Cluster: ENSANGP00000030252; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030252 - Anopheles gambiae
str. PEST
Length = 194
Score = 66.1 bits (154), Expect = 1e-09
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 SQNLDHIL-ANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTN 432
+ N+D +L +GG++ G L E+ G +GK+ LCL+L A + +P GL A+ ID
Sbjct: 22 THNVDSVLFPDGGLRPGELIEISGDSNSGKSLLCLELIARIILPTSCGGLELGAVLIDCE 81
Query: 433 TNFTPTRFKEILTASLLKCQKIEPSYLFN-EEEALDRLHYINAFGIEKFCACMNRISVFL 609
+++ T +L +P L + AL RLH I + +E+F + + V
Sbjct: 82 NSYSKTHILNHAEPALAS-TLTDPHLLETIQRAALSRLHLITCYSLEQFEFSLLALPVLF 140
Query: 610 AEHPRVKLIVIDSI 651
P + ++IDSI
Sbjct: 141 VRQPELTFVLIDSI 154
>UniRef50_Q0D0U2 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 743
Score = 65.7 bits (153), Expect = 1e-09
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 6/187 (3%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
SI T LD +L +GG+ G LTE+ G +GKTQ L L + Q+P GLN A+Y
Sbjct: 285 SISTLDPALDALL-HGGIPTGYLTEVTGESASGKTQFLLTLLLAAQLP-APRGLNKRAIY 342
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRIS 600
I T +R ++L + + + +L+ + INA +E +N
Sbjct: 343 ISTEAPIATSRLTQMLEFHPYLSTLSQDADIV---PSLENILSINAMDLESQDHILNYQL 399
Query: 601 VFLAEHPRVKLIVIDSITFPFKEG------ISVQKRTGLLFRQMADLQRIAMEGLIAVVL 762
V L++IDSIT ++ + + R+G L + L+ +A++ IA+V+
Sbjct: 400 PVAVSRYNVGLVIIDSITSNYRAEHSSHNLLGLSTRSGELTKLGQMLRNLAVKEDIAIVV 459
Query: 763 VNEMSTR 783
N++S R
Sbjct: 460 ANQVSDR 466
>UniRef50_A2ZKR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 294
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/87 (40%), Positives = 51/87 (58%)
Frame = +1
Query: 205 ATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP 384
A++L + + + T S+ LD IL +GG++ GS+TE+ G +GKTQLC LC + Q+P
Sbjct: 83 ASQLHAQRLEIIQVTTGSRELDKIL-DGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLP 141
Query: 385 KVLSGLNAEALYIDTNTNFTPTRFKEI 465
G +ALYID F P R +I
Sbjct: 142 LDQGGGEGKALYIDAEGTFRPQRLLQI 168
>UniRef50_UPI0000D56187 Cluster: PREDICTED: similar to CG3325-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG3325-PA - Tribolium castaneum
Length = 274
Score = 64.9 bits (151), Expect = 3e-09
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
+ GG+ + ++E++G G GKTQLCLQL Q+P L GL +Y+ T F R
Sbjct: 49 ITRGGIAVNRISEIVGYAGVGKTQLCLQLSLMAQLPISLGGLGKSVVYLCTEDAFPIKRL 108
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
K++ LK + N E D + + +E+ C++ L V L+
Sbjct: 109 KDLAITYSLKYHDLG----INFE---DNIFIEHLADVEQLKKCLSNSLTKLLLVKNVGLV 161
Query: 637 VIDSITFPFKE---GISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMS 777
VIDSI F+ ++ + R + L ++A + AVV VN+++
Sbjct: 162 VIDSIAGIFRSETLDVNYKNRNQDFILIVTLLNKLAKKYGFAVVCVNQVT 211
>UniRef50_Q54QU4 Cluster: AAA ATPase domain-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: AAA ATPase
domain-containing protein - Dictyostelium discoideum AX4
Length = 564
Score = 63.3 bits (147), Expect = 8e-09
Identities = 34/98 (34%), Positives = 54/98 (55%)
Frame = +1
Query: 178 NMSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCL 357
N+++ ++ T+ EL + + + T + +D L GG+ +TE+ G G+GKTQLC+
Sbjct: 145 NINSIELMTSLELEKLQISSIKLSTGCKIMDKCLG-GGISPIGITEIAGESGSGKTQLCI 203
Query: 358 QLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILT 471
QL VQ+P + GLN LYI T F R ++ T
Sbjct: 204 QLSLQVQLPFEMGGLNGACLYITTEPPFPTKRLNQMYT 241
>UniRef50_A6R196 Cluster: DNA repair protein RAD51; n=1; Ajellomyces
capsulatus NAm1|Rep: DNA repair protein RAD51 -
Ajellomyces capsulatus NAm1
Length = 297
Score = 63.3 bits (147), Expect = 8e-09
Identities = 41/120 (34%), Positives = 61/120 (50%)
Frame = +1
Query: 256 SQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNT 435
S+ LD +LA GG++ GS+TE+ G TGK+Q+C L + Q+P + G + LYIDT
Sbjct: 80 SKQLDTLLA-GGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMGGGEGKCLYIDTEG 138
Query: 436 NFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE 615
F PTR L Q+ Y +E LD + Y A+ + +N+ S + E
Sbjct: 139 TFRPTRL-------LAVAQR----YGLVGDEVLDNIAYARAYNSDHQLQLLNQASQMMCE 187
>UniRef50_A7ATP8 Cluster: Rad51 protein, putative; n=1; Babesia
bovis|Rep: Rad51 protein, putative - Babesia bovis
Length = 346
Score = 62.5 bits (145), Expect = 1e-08
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 4/200 (2%)
Frame = +1
Query: 196 IHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASV 375
I TA E + L T S LD +L GG++ GS+TE++G TGKTQLC L +
Sbjct: 89 ICTAAEYLECRLNLIKFTTGSTALDALL-QGGIESGSITEIIGDFSTGKTQLCHTLAITS 147
Query: 376 QIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYIN 555
Q+P +G + L+IDT +F P R I + + E + + Y+
Sbjct: 148 QLPIEQNGGEGKCLWIDTQNSFRPERLGPIAN-----------RFGLSHAECVANIVYVK 196
Query: 556 AFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADL 723
E+ + + ++A+ R ++++DS T ++ + + R L + L
Sbjct: 197 VSNTEQQFDMLVEAAHYMAQ-SRFAMLIVDSATALYRTDYTGRGELAARQMSLGKYFRAL 255
Query: 724 QRIAMEGLIAVVLVNEMSTR 783
+R+A +AVV+ N++ R
Sbjct: 256 KRLADIYGVAVVVTNQVMAR 275
>UniRef50_UPI0000DB74C1 Cluster: PREDICTED: similar to DNA-repair
protein XRCC3 (X-ray repair cross-complementing protein
3); n=1; Apis mellifera|Rep: PREDICTED: similar to
DNA-repair protein XRCC3 (X-ray repair
cross-complementing protein 3) - Apis mellifera
Length = 169
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ +T++ G TGKTQL LQLC +VQ+PK GL A A+YI T + F R
Sbjct: 28 LLQGGITNRGITQIYGAASTGKTQLALQLCLTVQLPKTEGGLAAGAIYICTESIFPSRRL 87
Query: 457 KEIL 468
+E++
Sbjct: 88 QELI 91
>UniRef50_A6RPX0 Cluster: Putative uncharacterized protein; n=2;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 485
Score = 61.3 bits (142), Expect = 3e-08
Identities = 56/193 (29%), Positives = 95/193 (49%), Gaps = 12/193 (6%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+I T ++D L GG+ G +TE+ G G GKTQ L L S Q+P GL + LY
Sbjct: 108 AISTLDDDMDRALG-GGIPAGYITEVTGESGAGKTQFLLTLLLSAQLP-APHGLASPTLY 165
Query: 421 IDTNTNFTPTRFKEIL-TASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMN-R 594
I T ++ TR ++L T LL PS LDR+ I+ +E + +
Sbjct: 166 ISTESSLPITRLSQLLRTHPLLASHPSPPS--------LDRVISISTPDLESQDHILRFQ 217
Query: 595 ISVFLAEHPRVKLIVIDSITFPFK---EGISVQKRTGLLFRQMADLQR-------IAMEG 744
+ V + H ++L+++DS+ ++ E V K G + ++ A+L + +A E
Sbjct: 218 VPVAIKRH-GIRLLILDSVAANYRAEFERPGVTKGGGNMAQRSAELVKLGQLLRDLAREH 276
Query: 745 LIAVVLVNEMSTR 783
+A+V+ N+++ R
Sbjct: 277 GVAIVVANQVADR 289
>UniRef50_A7E7I5 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 493
Score = 60.9 bits (141), Expect = 4e-08
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T ++D L GG+ G +TE+ G G GKTQ L L S Q+P GL A LYI
Sbjct: 109 ISTLDDDMDRALG-GGIPTGYITEITGESGAGKTQFLLTLLLSAQLPAPY-GLTAPTLYI 166
Query: 424 DTNTNFTPTRFKEIL-TASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMN-RI 597
T ++ TR +IL T LL PS LD++ I +E + ++
Sbjct: 167 STESSLPTTRLSQILRTHPLLASHPSPPS--------LDKIISIVTPDLESQDHILRFQV 218
Query: 598 SVFLAEHPRVKLIVIDSITFPF----------KEGISVQKRTGLLFRQMADLQRIAMEGL 747
V + H ++L+++DS+ + K G ++ +R+ L + L+ +A E
Sbjct: 219 PVAIKRH-GIRLLILDSVAANYRAEFERPGMTKGGGNMAQRSAELVKLGQLLRDLAREFG 277
Query: 748 IAVVLVNEMSTR 783
+A+V+ N+++ R
Sbjct: 278 VAIVVANQVADR 289
>UniRef50_Q2GW05 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 476
Score = 60.1 bits (139), Expect = 7e-08
Identities = 47/151 (31%), Positives = 71/151 (47%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+I T +LD L GG+ G +TE+ G G GKTQ L L + Q+P GL+ ALY
Sbjct: 126 TISTLDPDLDRALG-GGIPAGYVTEVTGESGAGKTQFLLSLLLAAQLPPP-HGLSRPALY 183
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRIS 600
I T + R ++LTA+ Q++ PS + +LD + +E +N
Sbjct: 184 ISTEAPLSTRRLAQMLTAN-PHFQRLPPS----QRPSLDNIISTVTPDLESQDHILNFQV 238
Query: 601 VFLAEHPRVKLIVIDSITFPFKEGISVQKRT 693
E + LIV+DS+ ++ S RT
Sbjct: 239 PVEVERRGIGLIVLDSVAANYRADTSTSIRT 269
>UniRef50_Q6FIZ6 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57; n=2; Saccharomycetales|Rep:
Similar to sp|P25301 Saccharomyces cerevisiae YDR004w
RAD57 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 466
Score = 59.7 bits (138), Expect = 1e-07
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
+D +L GG+ +TE+ G TGK+QL +QLC SVQ+P GLNA+ ++I T +
Sbjct: 93 IDEVLG-GGISTNCITEIFGESSTGKSQLLMQLCLSVQLPISEGGLNAKCVFITTEGDLP 151
Query: 445 PTRFKEILTASLLKCQ-KIEPSYLFNEE--EALDRLHYINAFGIEKFCACMNRISVFLAE 615
R ++ A + I S +F + + + H +N ++ V L
Sbjct: 152 TNRLAGMIEARKDWHELGISQSNIFTVSCPDLISQEHIVNV-----------QLPVLLER 200
Query: 616 HP-RVKLIVIDSITFPFKEGISVQKRTGLL-----FRQMAD-LQRIAMEGLIAVVLVNEM 774
+ +KLI+IDSI+ + + + L +MA+ LQ IA + +A+V+ N++
Sbjct: 201 NKGEIKLIIIDSISHHLRVELDTKSFKDSLENKAYITEMAEKLQGIATKHSVAIVVANQV 260
Query: 775 STR 783
+
Sbjct: 261 GDK 263
>UniRef50_Q6Q241 Cluster: Putative Rad51B protein; n=1;
Chlamydomonas reinhardtii|Rep: Putative Rad51B protein -
Chlamydomonas reinhardtii
Length = 392
Score = 59.3 bits (137), Expect = 1e-07
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Frame = +1
Query: 289 GVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEIL 468
GV +GS+TEL+G G GK+QL L +V +P+ L GL A +YIDT F+ R +E++
Sbjct: 97 GVPVGSITELVGPGGVGKSQLSHMLALAVAMPEALGGLGAGVVYIDTERKFSAPRLQEMV 156
Query: 469 TASLLKCQKI---EPSYLFN----EEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRV 627
A + + + +++ + E L R+ E+ + + + ++ R
Sbjct: 157 HARVAEAAAAAGPQAAHVLQPLAVQGEVLRRVAVSTPGSTEQLMQTVENLQHTVLQY-RA 215
Query: 628 KLIVIDSI 651
+L+V+DSI
Sbjct: 216 RLVVVDSI 223
>UniRef50_Q4N299 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria parva
Length = 286
Score = 59.3 bits (137), Expect = 1e-07
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Frame = +1
Query: 259 QNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTN 438
+ +D L NGG+ LG + E+ G G+GKTQ L L + V I ++ + LYI TN
Sbjct: 33 KEIDQAL-NGGLLLGKVCEIYGPSGSGKTQFALSLTSEVLINNLIHSKDYVVLYIYTNGT 91
Query: 439 FTPTRFKEILTASLLKCQ-KIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE 615
F R EIL + + I+ FN + L L+ ++ + +
Sbjct: 92 FPIERLNEILRSKYEDAKGLIKADENFNTSQLLKNLYVEKVTDNDELYFTFTSKLEEMLQ 151
Query: 616 HPRVKLIVIDSITFPFK--EGISVQ-KRTGLLFRQMADLQRIAMEGLIAVVLVNEMS 777
H VKLIVIDSI F+ + S +R + + ++RI+ E + ++ +N+ S
Sbjct: 152 H-NVKLIVIDSIAALFRTVQNESYHGQRINSITKVGLIMKRISHEYNLLILAINQAS 207
>UniRef50_A3FQK6 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 133
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Frame = +1
Query: 286 GGVQLGS-LTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI-DTNTNFTPTRFK 459
GG+ +G + EL G+PG+GKT LC L ++QIPK + G A+YI D+ F+ R +
Sbjct: 3 GGIIIGKGIIELCGVPGSGKTLLCKILALNIQIPKSIGGPGLNAIYIGDSEGGFSDNRLR 62
Query: 460 EILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEK 573
EI ++L + + E + + YI F +E+
Sbjct: 63 EISKSTLNYINAKKKTEDMTCENLIKNIKYIRIFDLEE 100
>UniRef50_A1RYZ3 Cluster: Rad51-like; n=1; Thermofilum pendens Hrk
5|Rep: Rad51-like - Thermofilum pendens (strain Hrk 5)
Length = 315
Score = 58.8 bits (136), Expect = 2e-07
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +1
Query: 205 ATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP 384
A++L Q+E S+ T + LD +L GG+ + E G G+GKTQLC QL + Q+P
Sbjct: 76 ASQLSQRE----SLTTGVKALDELL-EGGLVTQEIYEFAGEYGSGKTQLCHQLSVTAQLP 130
Query: 385 KVLSGLNAEALYIDTNTNFTPTRFKEI 465
GL + +Y+DT F+P+R + I
Sbjct: 131 PSRGGLGGKVVYVDTEGTFSPSRIERI 157
>UniRef50_A0DFA4 Cluster: Chromosome undetermined scaffold_49, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_49,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 256
Score = 58.4 bits (135), Expect = 2e-07
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Frame = +1
Query: 211 ELWQKETCLPSIPTFSQNLDHILA--NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP 384
E+ K L IP F + L + L+ +GG+Q G LTEL G G GKT +C+ L I
Sbjct: 8 EIESKFEHLSIIPIFDEILKYTLSLISGGIQTGILTELYGEAGCGKTHVCMTL----MIN 63
Query: 385 KVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFG 564
+++ + +YI T RF ++L ++ N H N
Sbjct: 64 TIINYKTSRVIYISTAKQLQQDRFNQLLCKISYVIGNQNIAWFTNLFNKCIIQHLNNTKF 123
Query: 565 IEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKE---GISVQKRTGLLFRQMADLQRIA 735
++++ ++ L ++ + KLI+ID+IT +E ++ ++T +L + +++A
Sbjct: 124 MDEY--IYEQLPTLLEQY-QFKLIIIDNITTYLQELQLTLNQMQKTSILKKFSNHFRKLA 180
Query: 736 MEGLIAVVLVNEM 774
+ IAVV VN +
Sbjct: 181 KKHNIAVVFVNNV 193
>UniRef50_Q9HMM4 Cluster: DNA repair and recombination protein radA;
n=160; Halobacteriaceae|Rep: DNA repair and
recombination protein radA - Halobacterium salinarium
(Halobacterium halobium)
Length = 343
Score = 58.4 bits (135), Expect = 2e-07
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GGV+ S+TE+ G G GK+Q+ QL +VQ+P GL+ A++ID+ F P R
Sbjct: 92 LLGGGVETQSITEVYGEFGAGKSQVTHQLAVNVQLPTEYGGLHGRAVFIDSEDTFRPERI 151
Query: 457 KEILTA-------SLLKCQKIEPSYLFNE------EEALDRLHYINAFGIEKFCACMNRI 597
+++ + ++ +IE S + + LD++H F +
Sbjct: 152 DDMVRGLSDETLQAAMEAHEIEGSTDDEDTLTELVDAFLDKIHVAKGFNSNHQMLLAEKA 211
Query: 598 SVFLAEHP----RVKLIVIDSITFPFKEGI----SVQKRTGLLFRQMADLQRIAMEGLIA 753
+EH V+++ +DS+T F+ + R L + + DL+++ A
Sbjct: 212 KEIASEHEDGDWPVRMLTVDSLTAHFRAEYVGRGELADRQQKLNKHLHDLEKVGNLYNAA 271
Query: 754 VVLVNEMST 780
V++ N++ +
Sbjct: 272 VLVTNQVQS 280
>UniRef50_Q16EQ5 Cluster: Rad51A protein, putative; n=1; Aedes
aegypti|Rep: Rad51A protein, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 329
Score = 57.6 bits (133), Expect = 4e-07
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Frame = +1
Query: 226 ETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLN 405
E + + T + LD +L GG+ G + E+ G +GKTQ+C+ + A+ +
Sbjct: 76 EDLVEPLKTGIRGLD-LLLEGGLLPGHVMEIFGDSSSGKTQICVTMAAN-----IARNHK 129
Query: 406 AEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCAC 585
+ Y+DT +F R +IL + Q+I +E + R+ E
Sbjct: 130 FDVFYVDTKCDFFARRIHKILELNKCSVQEI--------QETMGRIKVERILSPESLIKT 181
Query: 586 MNRISVFLAEHPRVKLIVIDSIT---FPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAV 756
M + + + + K+++IDS+ + ++ S G+L R + L+++A E LI++
Sbjct: 182 MEDLLIRVDDLKNFKVLIIDSLPPLWYQYQNTKSRCYPLGMLTRLIGLLRKLATENLISI 241
Query: 757 VLVN 768
VLVN
Sbjct: 242 VLVN 245
>UniRef50_A3KGH9 Cluster: RAD51 homolog; n=13; Eukaryota|Rep: RAD51
homolog - Mus musculus (Mouse)
Length = 236
Score = 56.8 bits (131), Expect = 7e-07
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Frame = +1
Query: 307 LTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLK 486
+TE+ G TGKTQ+C L + Q+P G +A+YIDT F P R LL
Sbjct: 1 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPER--------LL- 51
Query: 487 CQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK 666
+ Y + + LD + Y F + + + S + E R L+++DS T ++
Sbjct: 52 --AVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMVE-SRYALLIVDSATALYR 108
Query: 667 EGIS----VQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
S + R L R + L R+A E +AVV+ N++
Sbjct: 109 TDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQV 148
>UniRef50_A4R1B5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 548
Score = 56.8 bits (131), Expect = 7e-07
Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+I T LD L GG+ G +TE+ G G GKTQ L L +VQ+P GL +A+Y
Sbjct: 136 TISTLDPELDAALG-GGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPP-HGLGRKAMY 193
Query: 421 IDTNTNFTPTRFKEILTAS-LLKCQKIEPSYLFNEEEALDRLHYINAFG-IEKFCACMNR 594
I T + R ++L A+ LL PS LD + + G IE ++
Sbjct: 194 IPTEAALSTRRVAQMLAANPLLLSASPRPS--------LDSILSLQPLGDIEAQDHILSF 245
Query: 595 ISVFLAEHPRVKLIVIDSITFPFKEGISV--QKRTGLLFRQMADLQRIAME--GL----- 747
A V LI++DS+ F+ + TGL R A+L R+ M+ L
Sbjct: 246 QVPLEAARRNVGLIILDSVAANFRAEYDAAGSRSTGLAARS-AELVRLGMQLRNLARSLN 304
Query: 748 IAVVLVNEMSTR 783
+AVV+ N+++ R
Sbjct: 305 LAVVVANQVADR 316
>UniRef50_Q00YW7 Cluster: Meiotic recombination protein DMC1,
putative; n=2; Ostreococcus|Rep: Meiotic recombination
protein DMC1, putative - Ostreococcus tauri
Length = 371
Score = 56.4 bits (130), Expect = 9e-07
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 4/197 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E ++ + I + +D IL NGG + ++TE+ G GKTQ+C L + Q+
Sbjct: 121 TAAEDCERRKGVLHITCGAAAVDAIL-NGGFETRAITEIFGEWRCGKTQICHTLAVTTQM 179
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + G ++ +IDT F R + I + + + L +
Sbjct: 180 PIEMGGGCSKVAWIDTENTFRSDRL-----------EAIADRFGLDRDAVLSNVMVARVD 228
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGI----SVQKRTGLLFRQMADLQR 729
+++ + I +AE P KL+++DSI F+ + +R L + ++ L++
Sbjct: 229 TVDQMMQALIAIGAKMAEEP-FKLLIVDSIMAIFRVDYVARGELSERQQTLNQFLSRLRK 287
Query: 730 IAMEGLIAVVLVNEMST 780
+A E +AVVL N++ +
Sbjct: 288 LAEEFNVAVVLTNQVQS 304
>UniRef50_Q6C269 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 421
Score = 56.4 bits (130), Expect = 9e-07
Identities = 49/191 (25%), Positives = 89/191 (46%), Gaps = 5/191 (2%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSG 399
++E L +I T + +D ++ NGG G+L E+ G GK+ LQLC +VQ+ + G
Sbjct: 83 ERERPLDAISTGVRKIDTVM-NGGFPTGTLCEVAGESAAGKSHFLLQLCVNVQLARGEGG 141
Query: 400 LNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFC 579
L +A++I T + R +++ ++K L ++ +L + +I +E+
Sbjct: 142 LGKKAVFISTESGLETRRLVQMMD-HVIK--------LGHDNISLHHVSFIACKDLEQQD 192
Query: 580 ACMNRISVFLAEHPRVKLIVIDSITFPFKEGISVQK-----RTGLLFRQMADLQRIAMEG 744
L E L+VIDS+ ++ K R L R + L+ +A +
Sbjct: 193 RVFQYNLPNLLEDSSYGLVVIDSLAAHYRSEELTSKGDFSSRDKRLLRTLHHLKGLARKH 252
Query: 745 LIAVVLVNEMS 777
+AVV N++S
Sbjct: 253 NVAVVFANQIS 263
>UniRef50_Q0V430 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 551
Score = 56.4 bits (130), Expect = 9e-07
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Frame = +1
Query: 226 ETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLN 405
ET I T + LD L GG+ G L E+ G G GKTQL L L +VQ+P GL
Sbjct: 205 ETDWDCISTLDEELDAALG-GGIPPGYLVEVTGESGAGKTQLLLTLLLAVQLPPPY-GLA 262
Query: 406 AEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCAC 585
A+Y+ T + R A LL S +E+ +L ++ I +E
Sbjct: 263 KSAVYVSTEAVLSTKRL-----AQLLSSHPALASVSTDEKPSLSKILSIQTPDLESQEHI 317
Query: 586 MN-RISVFLAEHPRVKLIVIDSITFPF-----KEG-----ISVQKRTGLLFRQMADLQRI 732
+ ++ V + +H + L++IDS+ + K+G S+ KR L + A L+ +
Sbjct: 318 LRYQLPVAIKKH-GIGLVIIDSVAANYRAEFEKKGANNGAASMAKRGTQLVQLGALLREL 376
Query: 733 AMEGLIAVVLVNEMSTR 783
A IAVV+ N+++ R
Sbjct: 377 ARTEGIAVVVANQVADR 393
>UniRef50_Q4SSQ5 Cluster: Chromosome undetermined SCAF14352, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14352, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 619
Score = 56.0 bits (129), Expect = 1e-06
Identities = 35/124 (28%), Positives = 56/124 (45%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKE 462
+GG G + EL G GTGKT+L L +P GL E +++DT+ + R
Sbjct: 74 HGGPDHGDVVELHGPAGTGKTELLYHLLCRCVMPAAAGGLEVEVMFVDTDYSLDMLRLVS 133
Query: 463 ILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVI 642
IL L PS + L RL ++ + ++ + L+ P + L++I
Sbjct: 134 ILDRRLTGSPG-SPSTEASLRSCLSRLLVVHCSSSSQLLLTLHLLETSLSSRPGLALLLI 192
Query: 643 DSIT 654
DSI+
Sbjct: 193 DSIS 196
>UniRef50_Q8PZN5 Cluster: DNA repair and recombination protein radA;
n=21; Archaea|Rep: DNA repair and recombination protein
radA - Methanosarcina mazei (Methanosarcina frisia)
Length = 325
Score = 55.6 bits (128), Expect = 2e-06
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
+ GG++ ++TEL G G+GKTQ+ QL +VQ+ + GL + IDT F P R
Sbjct: 92 MMGGGIETQAITELYGEFGSGKTQVAHQLAVNVQMDREHGGLGGSVIIIDTENTFRPERI 151
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPR---- 624
+++ L + +E N EE L +H A+ ++ +V LA +
Sbjct: 152 TQMVN-GLSEKYGME----LNPEEFLQNIHVARAYNSNHQILLVDS-AVDLANELKEMGK 205
Query: 625 -VKLIVIDSITFPFK 666
V+L+++DS+ F+
Sbjct: 206 PVRLLIVDSLMAHFR 220
>UniRef50_Q69KV4 Cluster: Trad-like protein; n=3; Oryza sativa|Rep:
Trad-like protein - Oryza sativa subsp. japonica (Rice)
Length = 272
Score = 55.2 bits (127), Expect = 2e-06
Identities = 48/185 (25%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+PT Q +D +L GG++ G LTE+ G +GKTQ+C LC++ + G+ +Y+
Sbjct: 50 LPTGLQGVDALLG-GGLRQGQLTEITGQSSSGKTQVC--LCSASHVAARQLGV---VMYL 103
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT+ +F+P+R I+ + + EP + E + + + F I ++++ +
Sbjct: 104 DTSNSFSPSRIARIVDGFPISLVR-EPKNV-RLERVMSSIICKSVFDIFDLFEVLHQLEL 161
Query: 604 FLAEH-----PRVKLIVIDSIT---FPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVV 759
L ++ L++IDSI+ P G + R+ ++ M L+++A E ++V+
Sbjct: 162 SLKSKVNNGGNKICLLIIDSISSILAPINGGKYPRGRSMMISVAMI-LKKLAYEHNLSVL 220
Query: 760 LVNEM 774
+ N M
Sbjct: 221 VTNHM 225
>UniRef50_Q757K4 Cluster: AER008Wp; n=1; Eremothecium gossypii|Rep:
AER008Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 510
Score = 55.2 bits (127), Expect = 2e-06
Identities = 40/178 (22%), Positives = 88/178 (49%), Gaps = 9/178 (5%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L NGG+ +TE+ G +GK+Q +QL +VQ+P L G + ++I T ++ R
Sbjct: 97 LLNGGIYTHGITEVFGESSSGKSQFLMQLSLAVQLPLELDGSAGQCVFITTESDLPTKRI 156
Query: 457 KEIL-TASLLKCQKIEPSYLFNE--EEALDRLHYINAFGIEKFCACMNRISVFLAEHPRV 627
+ ++ + + ++ S +F + + H ++ ++ + L +P +
Sbjct: 157 ESMIKSREIFSAGRVSQSNIFTATCNDWTSQNHILSV-----------QLPILLERNPNI 205
Query: 628 KLIVIDSITFPFKEGISVQK-RTGL----LFRQMA-DLQRIAMEGLIAVVLVNEMSTR 783
+L++IDSI+ + ++ + + L L QMA +L ++ + +AVV+ N++ +
Sbjct: 206 RLVIIDSISHHLRVELAAKTFQQSLDNRSLIDQMAQNLLHLSQKHAVAVVVANQVGDK 263
>UniRef50_O58001 Cluster: DNA repair and recombination protein radA
[Contains: Pho radA intein]; n=3; Pyrococcus|Rep: DNA
repair and recombination protein radA [Contains: Pho
radA intein] - Pyrococcus horikoshii
Length = 529
Score = 55.2 bits (127), Expect = 2e-06
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Frame = +1
Query: 343 TQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNE 522
TQL L VQ+P GLN ++IDT F P R +EI K + ++P
Sbjct: 325 TQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREI-----AKNRGLDP------ 373
Query: 523 EEALDRLHYINAFGIEKFCACM----NRISVFLAEHPRVKLIVIDSITFPFKEGI----S 678
+E L ++ AF + ++I L VKL+++DS+T F+ +
Sbjct: 374 DEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDKPVKLLIVDSLTSHFRSEYIGRGA 433
Query: 679 VQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR 783
+ +R L + +ADL R+A IAV + N++ R
Sbjct: 434 LAERQQKLAKHLADLHRLANLYEIAVFVTNQVQAR 468
>UniRef50_Q9P6E6 Cluster: Related to RAD57 protein; n=2; Neurospora
crassa|Rep: Related to RAD57 protein - Neurospora crassa
Length = 510
Score = 54.0 bits (124), Expect = 5e-06
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+I T ++D L GG+ G +TE+ G G GKTQ L L SVQ+P GL ALY
Sbjct: 106 TISTLDPDIDRALG-GGIPAGYVTEITGESGAGKTQFLLTLLLSVQLPPP-HGLGRPALY 163
Query: 421 IDTNTNFTPTRFKEILTAS 477
I T + R ++LT +
Sbjct: 164 ISTEAPLSTRRLAQMLTTN 182
>UniRef50_Q17A54 Cluster: Spindle-b recombination protein spn-b;
n=1; Aedes aegypti|Rep: Spindle-b recombination protein
spn-b - Aedes aegypti (Yellowfever mosquito)
Length = 266
Score = 53.6 bits (123), Expect = 6e-06
Identities = 37/131 (28%), Positives = 61/131 (46%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ + E+ G PG+GKTQ+CL L + Q+ +YI T F R
Sbjct: 40 LTGGGISSRGIVEIAGDPGSGKTQMCLHLALACQMQ---CETRKGVVYISTEHPFPSKRL 96
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
++ + E S F + ++ L+ A +E+ C+N+ L E+ + L+
Sbjct: 97 VQMEQVMKRNLRITEDSMKFTDNIFVEHLN--TAVALEE---CVNQRLPILLENNPISLL 151
Query: 637 VIDSITFPFKE 669
+IDSIT + E
Sbjct: 152 IIDSITAAYTE 162
>UniRef50_Q6BWA8 Cluster: Similar to sp|P25301 Saccharomyces
cerevisiae YDR004w RAD57 DNA repair protein; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P25301
Saccharomyces cerevisiae YDR004w RAD57 DNA repair
protein - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 569
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/75 (40%), Positives = 42/75 (56%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
IPT + LD L NGG+ LG +TE+ G G GK+QL LQLC Q+ V N + +YI
Sbjct: 97 IPTGLEALDRQL-NGGIPLGEITEIFGASGCGKSQLLLQLCIYTQL--VGDPENNQCIYI 153
Query: 424 DTNTNFTPTRFKEIL 468
T + R +++
Sbjct: 154 STESPLETRRLHDMI 168
>UniRef50_P25301 Cluster: DNA repair protein RAD57; n=2;
Saccharomyces cerevisiae|Rep: DNA repair protein RAD57 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 460
Score = 52.0 bits (119), Expect = 2e-05
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L GG+ +TE+ G TGK+QL +QL SVQ+ + GL + +YI T + PT+
Sbjct: 110 LLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITTEGDL-PTQR 168
Query: 457 KEILTASLLKCQK--IEPSYLFNE--EEALDRLHYINAFGIEKFCACMNRISVFLAEHP- 621
E + +S +K I S +F + +++ H IN ++ + L
Sbjct: 169 LESMLSSRPAYEKLGITQSNIFTVSCNDLINQEHIINV-----------QLPILLERSKG 217
Query: 622 RVKLIVIDSITFPFKEGI------SVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR 783
+KL++IDSI+ + + Q+ L R LQ +A + ++VV+ N++ +
Sbjct: 218 SIKLVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAHDYSLSVVVANQVGDK 277
>UniRef50_UPI0000E46317 Cluster: PREDICTED: similar to Trad; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Trad - Strongylocentrotus purpuratus
Length = 208
Score = 51.2 bits (117), Expect = 3e-05
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+ T ++D +L +GGV LTE++G GKTQ CL L + V + L+I
Sbjct: 45 LSTGCDSIDKLL-DGGVYTSELTEIVGQAAVGKTQFCLTLASCVAVSS-----EQNVLFI 98
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DTN F +R +I+ A +KI + AL ++H F + + I
Sbjct: 99 DTNGGFHASRLHDII-AHKSTSEKITSA-------ALHKVHCATTFDLYDLLDLLESIKA 150
Query: 604 FL-----AEHPRVKLIVIDSIT 654
+ A + +KL+V+DS+T
Sbjct: 151 SIDSASEAFYSSLKLVVVDSVT 172
>UniRef50_Q6YU07 Cluster: Putative XRCC3; n=2; Oryza sativa|Rep:
Putative XRCC3 - Oryza sativa subsp. japonica (Rice)
Length = 290
Score = 51.2 bits (117), Expect = 3e-05
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD +L+ GG+ S+TE+ G +GKTQLCLQL ++ P LS L+A L++ ++ F
Sbjct: 50 LDRLLS-GGLPPASVTEIAGESASGKTQLCLQL--ALLAP--LSPLSASCLFLHSDLPFP 104
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEH-- 618
R + + S + LD + A + ++R LA
Sbjct: 105 LRRLRGLAPKS--------------RPDLLDHVLVAAAHSPSDLISLLSRAQRLLAHPGR 150
Query: 619 -PRVKLIVIDSITFPFKEGI-----SVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
P V+LI++DSI F+ +++R+ L FR A L+ +A VV+ N++
Sbjct: 151 LPPVRLILVDSIASLFRADFDASPADLKRRSALFFRISAKLKELAHRHRCVVVVTNQV 208
>UniRef50_A7DQP6 Cluster: RecA/RadA recombinase-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: RecA/RadA
recombinase-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 217
Score = 50.8 bits (116), Expect = 5e-05
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 4/179 (2%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T + LD L GG+ G + ++ G GTGKTQL LQL I + G LY
Sbjct: 2 ISTGLEKLDKSLF-GGIPNGVIVDIFGKNGTGKTQLLLQLA----INSIKKG--GHVLYF 54
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT F P R +I ++E+ + ++N + + +I+
Sbjct: 55 DTTGGFRPERILDI------------------QKESESQSDFLNQITVSRLTNTSEQINS 96
Query: 604 FLAEHPRVKLIVIDSIT----FPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVN 768
LIVID+IT + +++ S+ ++ L + M DL A+ I +V+ N
Sbjct: 97 IKNIERNFSLIVIDNITDLFSYEYQKDESIFEKNSLFMKYMHDLANFAISNRIPIVVTN 155
>UniRef50_Q566S1 Cluster: LOC553395 protein; n=4; Danio rerio|Rep:
LOC553395 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 299
Score = 50.4 bits (115), Expect = 6e-05
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = +1
Query: 280 ANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFK 459
A+GG G + E G+ G+GKT+ L P GL ++IDT+ +F RF
Sbjct: 34 ADGGPGQGDVVEFHGMEGSGKTETLYHLITRCLTPTHSGGLEVGVVFIDTDYHFDMLRFV 93
Query: 460 EILTASLLKCQKIEPSYLFNE--EEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKL 633
IL L + K E L RL ++ + ++ + + P + L
Sbjct: 94 SILEGRLAEDSKTGSENEAEETVRSCLCRLSVVHCNSSVQLLLTLHYLENTFSSQPTLGL 153
Query: 634 IVIDSIT 654
+VIDSI+
Sbjct: 154 LVIDSIS 160
>UniRef50_A4S5M9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 288
Score = 50.4 bits (115), Expect = 6e-05
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEA 414
L +PT +D +L GG++ G L E+ G +GKTQLCL AS + L+
Sbjct: 38 LEILPTGCDAIDELLG-GGLRQGQLIEITGPSASGKTQLCLSAAAS------FAALDNRV 90
Query: 415 LYIDTNTNFTPTRFKEI 465
+Y+DT F+ TR K++
Sbjct: 91 VYVDTTGGFSATRIKQL 107
>UniRef50_UPI0000585DAC Cluster: PREDICTED: similar to RAD51-like 1
(S. cerevisiae), partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RAD51-like 1 (S.
cerevisiae), partial - Strongylocentrotus purpuratus
Length = 128
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 205 ATELWQKET--CLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
A +L ++ T C +PT LD +L GG+ LG++TE+ G PG GKTQ C+ L
Sbjct: 67 ALQLCERNTGSCPGFLPTSLTTLDQLL-QGGLLLGTITEIAGPPGCGKTQFCMMLSVLAT 125
Query: 379 IP 384
+P
Sbjct: 126 LP 127
>UniRef50_A5DET9 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 504
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +1
Query: 208 TELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPK 387
T + + ET + T ++LD L NGG ++G +TE+ G GTGK+QL LQ+ I
Sbjct: 77 TPVLEPETTTLHVSTGIESLDQRL-NGGAKVGDITEIFGASGTGKSQLLLQM----SINS 131
Query: 388 VLSGLNAEALYIDTNTNFTPTRFKEI 465
V +++++YI T + +R +E+
Sbjct: 132 VKLHESSKSVYISTESVIATSRLEEM 157
>UniRef50_O43543 Cluster: DNA-repair protein XRCC2; n=16;
Tetrapoda|Rep: DNA-repair protein XRCC2 - Homo sapiens
(Human)
Length = 280
Score = 48.0 bits (109), Expect = 3e-04
Identities = 32/118 (27%), Positives = 50/118 (42%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASL 480
G + E G GTGKT++ L A +PK GL E L+IDT+ +F R IL L
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 481 LKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSIT 654
+ + Y L R + + + HP + L+++DS++
Sbjct: 101 SQSSEEIIKY------CLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLS 152
>UniRef50_Q4SEP3 Cluster: Chromosome undetermined SCAF14615, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14615, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 332
Score = 47.6 bits (108), Expect = 4e-04
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Frame = +1
Query: 262 NLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNF 441
+LD +L + G G +TEL G PG+GK+Q+C + + L +++DT
Sbjct: 88 SLDKLL-DSGFYTGEITELSGGPGSGKSQVCFAAAVHISL-----HLKQSVVFVDTTGGL 141
Query: 442 TPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEH- 618
T R ++L A E S + EAL R+H F + C+ + +
Sbjct: 142 TAGRLLQMLEA--------ESSKRDEQMEALQRIHVFRLFDVFSLLDCLYALRAGTLQQV 193
Query: 619 ----PRVKLIVIDSITFPFKEGISVQKRTGL-LFRQMAD-LQRIAMEGLIAVVL 762
VK +++DS++ + ++ G+ L Q+ L+ IA + IA ++
Sbjct: 194 SVGGGSVKAVIVDSVSAVIAPVLGGKQNEGMSLMTQVGGVLKTIAKDFNIAALV 247
>UniRef50_Q1ZXF0 Cluster: Putative DNA repair protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative DNA repair
protein - Dictyostelium discoideum AX4
Length = 354
Score = 47.6 bits (108), Expect = 4e-04
Identities = 30/114 (26%), Positives = 56/114 (49%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD +L G G + EL+G GKTQ+ +C S+ + + N+ +YID++ +F+
Sbjct: 96 LDQLLGGNGFTSGEIYELVGNTSCGKTQI--SMCCSLNLSQQY---NSNIIYIDSSNSFS 150
Query: 445 PTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVF 606
P R EI ++ L Q+ + +++ + + +K ++RI VF
Sbjct: 151 PPRLIEIFKSNYLIKQRQKQQQKQQQKQHQKQQENNDKIEQDKILKILDRIKVF 204
>UniRef50_Q01C18 Cluster: Rad51B protein; n=2; Ostreococcus|Rep:
Rad51B protein - Ostreococcus tauri
Length = 618
Score = 47.2 bits (107), Expect = 6e-04
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 10/173 (5%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GGV+ +TE+ G GTGKT LC QL Q+ L +Y+ T PT
Sbjct: 348 GGVRTRQITEVCGESGTGKTHLCAQLALFAQL-----DLGGSTVYVHTEGR-APTDVMRR 401
Query: 466 LTASLLKCQKIEPSYLFNEEEALDRLHYINAFG-IEKFCACMNRISVFLAE----HPRVK 630
+T + + AL+R++ + + G + + +S L V+
Sbjct: 402 MTTTRRFVEAFGGD--ARARGALERVYAVKSLGDADGLRETLEGVSAVLRSPIDVRAPVR 459
Query: 631 LIVIDSITFPFKE-----GISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
LIV+DS T PF++ +R G L + L+ A +AVV+ N +
Sbjct: 460 LIVVDSATAPFRDADGGGATYAARRAGTLHKMTMLLKEYASVHDLAVVVTNHV 512
>UniRef50_Q30L73 Cluster: Gp72; n=1; Listeria phage P100|Rep: Gp72 -
Listeria phage P100
Length = 414
Score = 47.2 bits (107), Expect = 6e-04
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+PTF LD+IL GG+ G LTE++G +GK+ L +V + KV L+ + ++I
Sbjct: 38 LPTFIPQLDYILG-GGIPFGRLTEIMGKNASGKSTL------AVHLTKVALQLDCKVIWI 90
Query: 424 DTNTNFTPTRFKEI 465
DT P+R ++
Sbjct: 91 DTEGTADPSRLSQL 104
>UniRef50_A5K641 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 333
Score = 46.8 bits (106), Expect = 7e-04
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +1
Query: 259 QNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTN 438
+ L+ NG + SL E++G+PG+GKTQ L LCA + + + A Y+ N
Sbjct: 35 KKLNRFFENGMLNY-SLVEVVGVPGSGKTQFALTLCAELLLKMIDEERQAIVFYVYFNRM 93
Query: 439 FTPTRFKEILTASL 480
F R +EI+ + L
Sbjct: 94 FPMRRLEEIIESKL 107
>UniRef50_Q5JET4 Cluster: DNA repair and recombination protein radA
[Contains: Pko radA intein]; n=12; Archaea|Rep: DNA
repair and recombination protein radA [Contains: Pko radA
intein] - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 836
Score = 46.8 bits (106), Expect = 7e-04
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Frame = +1
Query: 343 TQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNE 522
TQL L VQ P GL ++IDT F P R K+I + + ++P
Sbjct: 632 TQLAHTLAVMVQKPPEEGGLGGSVIWIDTENTFRPERIKQI-----AENRGLDP------ 680
Query: 523 EEALDRLHYINAFGIEKFCACMNRISVFL---AEHPR-VKLIVIDSITFPFKEGI----S 678
EE L ++ AF + + + AE R VKL+V+DS+ F+ +
Sbjct: 681 EETLKNIYVARAFNSNHQMLLVEKAEEIIKEKAESDRPVKLLVVDSLMAHFRAEYVGRGT 740
Query: 679 VQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR 783
+ +R L + +ADL R+A IAV + N++ +
Sbjct: 741 LAERQQKLAKHLADLHRLADLYDIAVFVTNQVQAK 775
>UniRef50_Q9LQQ2 Cluster: DNA repair protein RAD51 homolog 4; n=6;
Arabidopsis thaliana|Rep: DNA repair protein RAD51
homolog 4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 322
Score = 46.8 bits (106), Expect = 7e-04
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
++ T + D +L GG + G LTEL+G +GKTQ C+Q ASV + LY
Sbjct: 88 TLSTGDKETDSLL-QGGFREGQLTELVGPSSSGKTQFCMQAAASVAENHL-----GRVLY 141
Query: 421 IDTNTNFTPTRFKEILTAS 477
+DT +F+ R + + +S
Sbjct: 142 LDTGNSFSARRIAQFICSS 160
>UniRef50_A3FQA6 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 304
Score = 46.4 bits (105), Expect = 0.001
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 25/191 (13%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASV-----QIPKVLSGLNAE-----ALYIDTN 432
NGG+ L E+ G GTGKTQ CL L SV KV+ LN++ LY + N
Sbjct: 50 NGGIPKRILFEITGEAGTGKTQWCLTLITSVLLRNLDFSKVMGELNSDIGIVCVLYTE-N 108
Query: 433 TNFTPTRFKEILTASL----LKCQKIEPSYLFNEEEALDRLH-----YINAFGI---EKF 576
F+ R EIL + L LK E NE++ L+ LH Y+ + I E
Sbjct: 109 GVFSNGRLSEILKSKLEFEYLKANSKE-KLDNNEDDLLNILHNKLMNYVKVYKINTLEDL 167
Query: 577 CACMNRISVFLAEHPRVKLIVIDSITFPFKEGISVQKRTGL---LFRQMADLQRIAMEGL 747
+ R+ + + ++ I IDSIT ++ +S + + L + +RI+++
Sbjct: 168 NIFLQRVIPGICLNHKIDAIFIDSITNLYRSKVSFSENSSASTSLIQFSNVFKRISVDQD 227
Query: 748 IAVVLVNEMST 780
+++ N+ +T
Sbjct: 228 SWLIVTNQTTT 238
>UniRef50_Q9HPF2 Cluster: DNA repair and recombination protein radB;
n=5; Halobacteriaceae|Rep: DNA repair and recombination
protein radB - Halobacterium salinarium (Halobacterium
halobium)
Length = 236
Score = 46.4 bits (105), Expect = 0.001
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+PT LD +L GGV+ G++T+L G P GKT + L + GL A+Y+
Sbjct: 8 LPTGCGALDELLG-GGVERGTVTQLYGPPAAGKTNVALTTAVTTA---AAGGL---AVYV 60
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT + RF+++L A + + + ++ D A R +
Sbjct: 61 DTE-GLSLARFQQLLEARATDPEAASANVIVSDAHDFDEQ------------AQAVRDTA 107
Query: 604 FLAEHPRVKLIVIDSITFPFKEGISVQKRTGLLFRQMAD----LQRIAMEGLIAVVLVNE 771
A+ R LIV+DS+T ++ TG RQ+AD L +A + +AVV+ N+
Sbjct: 108 DFAD--RADLIVVDSVTGFYRLARGGDDTTGDALRQVADQITHLLSLARKHDLAVVVTNQ 165
Query: 772 MST 780
+ T
Sbjct: 166 VFT 168
>UniRef50_Q2NHD1 Cluster: RadB; n=1; Methanosphaera stadtmanae DSM
3091|Rep: RadB - Methanosphaera stadtmanae (strain DSM
3091)
Length = 232
Score = 45.6 bits (103), Expect = 0.002
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
IPT S +LD +L GG++ G +T+ G PG+GKT + L++ + ++A+Y+
Sbjct: 13 IPTNS-SLDKLLG-GGIEKGCITQFYGPPGSGKTNIALKILYEA------TKNGSKAIYM 64
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT + R ++I I + E ++ D E+ N I
Sbjct: 65 DTEGGLSLERIQQIAGTDF---GSISKNIYILEPKSFD----------EQILDIQN-IED 110
Query: 604 FLAEHPRVKLIVIDSITFPFK----EGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNE 771
L + + +++IDSI ++ + + KR G R MA L R++ E +A+V+ N+
Sbjct: 111 ILKKDKSIDMLIIDSIVALYRVEDGDPSEINKRLG---RLMAKLLRLSREYNVAIVITNQ 167
Query: 772 M 774
+
Sbjct: 168 I 168
>UniRef50_Q4S4D7 Cluster: Chromosome 2 SCAF14738, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14738, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 353
Score = 45.2 bits (102), Expect = 0.002
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Frame = +1
Query: 181 MSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQ 360
M N TA+E K + I T SQ D +L GG++ ++TE G TGKTQL
Sbjct: 63 MLNVGFQTASEYSAKRKHVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHT 121
Query: 361 LCASVQIPKVLSG----------------LNAEALYIDTNTNFTPTRFKEILTASLL--- 483
LC ++ S L A + + ++ + I T +
Sbjct: 122 LCGEDGAVEMWSSHDCLWNEVCRLVFPRCLCAVTSQLPGDDGYSGGKVIFIDTENTFRPD 181
Query: 484 KCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRV-KLIVIDSITFP 660
+ + I + ++E LD + Y A+ E ++ ++ E V KL+V+DSI
Sbjct: 182 RLRDIADRFNVDQEAVLDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLVVDSIMAL 241
Query: 661 FKEGIS----VQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMS 777
F+ S + +R L + ++ LQ+I+ E +AV + N+M+
Sbjct: 242 FRVDFSGRGELAERQQKLAQMLSRLQKISEEYNVAVFITNQMT 284
>UniRef50_A5UKT8 Cluster: DNA repair protein, RadB; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: DNA repair
protein, RadB - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 234
Score = 45.2 bits (102), Expect = 0.002
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 1/178 (0%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
IPT S +D++L +GGV+ G++T++ G PG+GK+ + L L +V + + +Y+
Sbjct: 13 IPTNS-GIDNLL-DGGVEKGTVTQIFGPPGSGKSNISLVLAVNV------AKQGKKVVYV 64
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT + R K+I K + +F L++ N IE +
Sbjct: 65 DTEGGISINRIKQIAGEDFPKI--VNNIIVFEPTSFLEQNE--NLKTIELW--------- 111
Query: 604 FLAEHPRVKLIVIDSITFPFK-EGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
H V L V+DS ++ + + + L +QM L +IA +AVVL N++
Sbjct: 112 IRKHHDDVDLCVLDSAVALYRVDDMKSSRLNKELGKQMGILAKIARNYDVAVVLTNQI 169
>UniRef50_Q4ST80 Cluster: Chromosome undetermined SCAF14285, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14285,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 265
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKE 462
+GG G + EL G GTGKT+L L +P GL E +++DT+ + R
Sbjct: 29 HGGPDHGDVVELHGPAGTGKTELLYHLLCRCVMPAAAGGLEVEVMFVDTDYSLDMLRLVS 88
Query: 463 ILTASL 480
IL L
Sbjct: 89 ILDRRL 94
>UniRef50_Q8TWK1 Cluster: RadA recombinase; n=1; Methanopyrus
kandleri|Rep: RadA recombinase - Methanopyrus kandleri
Length = 316
Score = 44.8 bits (101), Expect = 0.003
Identities = 47/155 (30%), Positives = 68/155 (43%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
T +L ++E IPT Q D + GG+ G + + G PG GK+Q Q+ A
Sbjct: 75 TLADLLEEEKKRDVIPTGIQGFDERMG-GGLPTGVIVGMYGPPGAGKSQFATQVAAHA-- 131
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
+ G LYIDT F P R EI K + E S F L R+ I+A
Sbjct: 132 --LKEG--ESVLYIDTENAFRPQRLLEI--GGFKKDELKEVSDRF----VLRRI--IDAA 179
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK 666
+ ++ + A K++VIDSI+ PF+
Sbjct: 180 ALRQYFDEKEGEFISEAYELTPKVVVIDSISQPFR 214
>UniRef50_Q55ZY8 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 374
Score = 44.0 bits (99), Expect = 0.005
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP--KVLSGLNA-------EALYIDTNTN 438
G + G E+ G PG GK+ L L + S ++ + + + A E L IDT +
Sbjct: 114 GSIVPGMSIEISGPPGGGKSSLALAIAMSARLSPGNLTNSVRADDQSEKGEVLLIDTEGS 173
Query: 439 FTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEH 618
T R + Q+I + + + L + + F + A + +S +L H
Sbjct: 174 MTSERLFKA-------AQRIHGNT--DTKSFLKGFYLVRIFSQAQMIAFIYTLSDWLESH 224
Query: 619 PRVKLIVIDSITFPFKE-GISVQKRTGLL---FRQMADLQRIAMEGLIAVVLVNEMSTR 783
P+V L+VID+++F F++ G+ + R ++ R + AV++ N+++T+
Sbjct: 225 PKVNLVVIDTLSFHFRQPGLDLAARRKIMDLWIRCKQTINHATALRRCAVIVCNQLATK 283
>UniRef50_O28184 Cluster: DNA repair and recombination protein radB;
n=1; Archaeoglobus fulgidus|Rep: DNA repair and
recombination protein radB - Archaeoglobus fulgidus
Length = 221
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEAL 417
IPT S+ +D +L GGV+ G++T++ G GTGKT LCL L + ++ ++ E L
Sbjct: 6 IPTGSKCIDSLLG-GGVETGTVTQIYGHGGTGKTTLCLMLAKNAAEQFKVAYIDTEGL 62
>UniRef50_Q8TUJ3 Cluster: DNA repair protein; n=6;
Euryarchaeota|Rep: DNA repair protein - Methanosarcina
acetivorans
Length = 267
Score = 43.6 bits (98), Expect = 0.007
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFT 444
LD +L GG + G +T++ G GTGKT +C+QL +V+ K + ++IDT +
Sbjct: 57 LDELLG-GGFERGIVTQVFGAAGTGKTNICIQL--AVECVK----QGQKVIFIDTE-GLS 108
Query: 445 PTRFKEI 465
P RFK+I
Sbjct: 109 PVRFKQI 115
>UniRef50_A3KGI2 Cluster: RAD51 homolog; n=1; Mus musculus|Rep:
RAD51 homolog - Mus musculus (Mouse)
Length = 178
Score = 43.2 bits (97), Expect = 0.009
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQ 348
TATE Q+ + + I T S+ LD +L GG++ GS+TE+ G TGKTQ
Sbjct: 131 TATEFHQRRSEIIQITTGSKELDKLL-QGGIETGSITEMFGEFRTGKTQ 178
>UniRef50_P47581 Cluster: Protein recA; n=2; Mycoplasma|Rep: Protein
recA - Mycoplasma genitalium
Length = 340
Score = 43.2 bits (97), Expect = 0.009
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
+K + + +I T S NLD L +GG+ LG + EL G +GKT + L AS Q
Sbjct: 33 KKNSEIETISTGSLNLDEALGSGGLPLGRIVELYGNESSGKTTIALNAVASFQ 85
>UniRef50_Q4QH57 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 521
Score = 42.7 bits (96), Expect = 0.012
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 5/181 (2%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
IPT ++LD L G ++ G +TEL GLPGTGKT L C S L G + +++
Sbjct: 148 IPTGLRSLDSALL-GVLRRGWVTELTGLPGTGKTTLAAAWCRSCLRHARLCGTAHDCVWL 206
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
+ + +LT + ++ + + L + +A+ N G+++ +
Sbjct: 207 QSGS----AVHSAVLTTA---HEEADATELPSLADAVHVACLSNLDGLQQLLDRWHGTEG 259
Query: 604 FLAEHPRVKLIVIDSITFPFKEGISVQ-----KRTGLLFRQMADLQRIAMEGLIAVVLVN 768
+ V LIV+DSIT + + +R L + L+R+A E +AV+++
Sbjct: 260 SASPLSTVGLIVLDSITDLMRRSFRCEDDDALQRHEALATTLQSLKRLAEEQRLAVLVIT 319
Query: 769 E 771
+
Sbjct: 320 Q 320
>UniRef50_Q17B21 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 302
Score = 42.7 bits (96), Expect = 0.012
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Frame = +1
Query: 271 HILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPT 450
++ +GG G + E+ G GK+ L L+ A + +P+ G A++++ + N
Sbjct: 28 NLFPDGGPLKGEMVEVFGDSNCGKSCLILEFIAKIILPEDYGGHGIGAVFVNCDNNVNMA 87
Query: 451 RFKEILTASLLKCQKIEPSYLFNEE------EALDRLHYINAFGIEKFCACMNRISVFLA 612
R I+ ++ K + +E E+ RL I +++F + ++
Sbjct: 88 RLLNIMERQIINYSKPASGNIDKQEIRRIRQESFSRLTIIKCCTMDEFEFSLLTLNEIFI 147
Query: 613 EHPRVKLIVIDSIT 654
++P ++IDS+T
Sbjct: 148 KNPLSVYLLIDSLT 161
>UniRef50_O50248 Cluster: DNA repair and recombination protein radB;
n=6; Methanococcales|Rep: DNA repair and recombination
protein radB - Methanococcus maripaludis
Length = 216
Score = 42.7 bits (96), Expect = 0.012
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L NG ++ ++T++ G PG GKT +C+ + + K + +YIDT + + R
Sbjct: 5 LLNGNIEKKTITQIYGPPGVGKTNICI-----ISMLKAIEN-GKNVVYIDTEGSLSIERI 58
Query: 457 KEIL---TASLLKCQKI-EPSYLFNEEEALDRLHYINAFGI 567
K++ LLK I EPS + EAL+++ + G+
Sbjct: 59 KQLSGKDCDELLKNIIIYEPSSFEEQSEALEKIFLLENVGL 99
>UniRef50_O14129 Cluster: DNA repair protein rhp55; n=1;
Schizosaccharomyces pombe|Rep: DNA repair protein rhp55
- Schizosaccharomyces pombe (Fission yeast)
Length = 350
Score = 42.7 bits (96), Expect = 0.012
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 256 SQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNT 435
S+ LD G++ G ++E+ G PG GKT L LQ+ A+ +LSG + ++++T
Sbjct: 29 SKLLDDAFGGSGLKRGYISEVCGAPGMGKTSLALQITANA----LLSG--SRVIWVETCQ 82
Query: 436 NFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE 615
R +++L + Q E + +E L+ L + A + A + +
Sbjct: 83 PIPMERLRQLLDNHVPSSQDEEEK--CDTDELLNLLDVVYAPNLVNILAFLRNFD--QEK 138
Query: 616 H-PRVKLIVIDSITFPFK 666
H + L++ID+++ P +
Sbjct: 139 HLKEIGLLIIDNLSMPIQ 156
>UniRef50_UPI0000D56FBB Cluster: PREDICTED: similar to RAD51-like 3;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
RAD51-like 3 - Tribolium castaneum
Length = 339
Score = 42.3 bits (95), Expect = 0.016
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
IPT + +D +L NGG+ G++ EL G P +GKT L L I V+ ++
Sbjct: 108 IPTGIKGVDQLL-NGGLFTGNIYELCGPPASGKTHFVLTL-----IKNVILNMDQNVHIF 161
Query: 424 DTNTNFTPTRFKEIL 468
DT +F+ + K++L
Sbjct: 162 DTKNDFSAVKMKQML 176
>UniRef50_Q6L2I8 Cluster: DNA repair and recombination protein RadB;
n=1; Picrophilus torridus|Rep: DNA repair and
recombination protein RadB - Picrophilus torridus
Length = 228
Score = 42.3 bits (95), Expect = 0.016
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+P+ + +D ++ NGG++ G +TE+ G G+GKT + + SV +LSG +YI
Sbjct: 13 LPSNVKCIDELM-NGGLEPGIITEIYGQGGSGKTNISMIFARSV----LLSG--KRVIYI 65
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
DT F+ RF +I C P + L R I+ ++ A + S
Sbjct: 66 DTE-GFSTERFSQI-------C----PDKSLYKNMVLFRASSID----DQDLAIIR--SE 107
Query: 604 FLAEHPRVKLIVIDSIT--FPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
L + L+++DS+T F ++G + R +++ L IA+ I V+L N++
Sbjct: 108 KLMKEKNYSLLILDSLTSFFRIEKGNDISSRMSGFEKELGMLNNIAVRYNIPVLLTNQI 166
>UniRef50_A7KV38 Cluster: RecA; n=1; Bacillus phage 0305phi8-36|Rep:
RecA - Bacillus phage 0305phi8-36
Length = 457
Score = 41.9 bits (94), Expect = 0.021
Identities = 29/111 (26%), Positives = 56/111 (50%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEA 414
L +PT S+ ++ ++ GG+ G +TE+ G +GKT LCL+ + +A
Sbjct: 54 LTFLPTPSEEIN-VMTGGGIPRGRITEIFGNNSSGKTSLCLETIGE----DMEQDPDALW 108
Query: 415 LYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGI 567
++++ +F P +++ L + ++ S L EE++DRL + GI
Sbjct: 109 AWLESEESFDPDYARDVHGIDLDRLIYVDIS-LKGAEESIDRLEVLMRSGI 158
>UniRef50_A7AT31 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 274
Score = 41.9 bits (94), Expect = 0.021
Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 4/162 (2%)
Frame = +1
Query: 298 LGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTAS 477
LG LTE+ G G+GKTQ+ L L A + + N LY T+ F RF +I+
Sbjct: 30 LGMLTEIYGESGSGKTQVALTLVAEELVRMQEADSNDVMLYFQTSRAFPMQRFCDIIEHK 89
Query: 478 LLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITF 657
E L F + + + ++LIVIDSI
Sbjct: 90 RKSKNSRFKGAPLGPREIAKHLRIYRPSEPTLFLEELRNLHADVGASYHIRLIVIDSIAC 149
Query: 658 PF----KEGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNE 771
F ++ + L + L+R+A + ++L+NE
Sbjct: 150 LFGDCMEDKDADNASMNTLLNVASILKRLAHQKNALILLINE 191
>UniRef50_A0MN30 Cluster: RecA/RadA recombinase; n=1; Thermus phage
phiYS40|Rep: RecA/RadA recombinase - Thermus phage
phiYS40
Length = 339
Score = 41.5 bits (93), Expect = 0.028
Identities = 40/145 (27%), Positives = 68/145 (46%)
Frame = +1
Query: 136 KNILNAYKKI*TYPNMSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTE 315
K I+++Y K S +I+T EL K+T + T +D L GG+ +G + E
Sbjct: 7 KQIISSYAK-----KFSKEEIYTGQEL--KQTKEEIVSTGILTVDLALGIGGIPMGKIIE 59
Query: 316 LLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQK 495
+ G +GKT L + +Q N +ID +F P + E L +L +
Sbjct: 60 VYGQESSGKTTFSLITISQMQ------KANKICAFIDAENSFDPI-WAETLGVNLDELLL 112
Query: 496 IEPSYLFNEEEALDRLHYINAFGIE 570
IE + L EE+L++L ++ G++
Sbjct: 113 IEANSL---EESLEKLEFLINQGVK 134
>UniRef50_Q4S202 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 453
Score = 41.1 bits (92), Expect = 0.037
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKE 462
+GG G + EL G GT KT+L L +P GL E +++DT+ + R
Sbjct: 23 HGGPDHGDVVELHGPAGTVKTELLYHLLCRCVMPAAAGGLEVEVMFVDTDYSLDMLRLVS 82
Query: 463 ILTASL 480
IL L
Sbjct: 83 ILDRRL 88
>UniRef50_A5DYZ1 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 711
Score = 41.1 bits (92), Expect = 0.037
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T +LD L GG+ +G ++E+ G G GK+Q Q+ + +L G +++
Sbjct: 201 ISTGLPDLDEQLG-GGIPIGEVSEVFGASGCGKSQFVYQIIHN----SILQGAKNTVVHV 255
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIE-KFCACMNRIS 600
T + R K+I + + S + LDR+ YI +E + ++
Sbjct: 256 ATESFMESKRLKDIFES--------DSSSSSSLSSKLDRMSYIYCPDLETQDHILFTQLP 307
Query: 601 VFLAEH-PRVKLIVIDSITFPFK 666
+ L E+ + KL+VIDSI F+
Sbjct: 308 IHLQENIGKTKLLVIDSIAQHFR 330
>UniRef50_Q384W8 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 423
Score = 40.7 bits (91), Expect = 0.049
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +1
Query: 229 TCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
+C I T + LD +LA GGV+ G +TE+ G GTGKT L L L
Sbjct: 128 SCFGVISTGHKCLDDVLA-GGVKCGLVTEITGASGTGKTALALNL 171
>UniRef50_Q9V2F6 Cluster: DNA repair and recombination protein radB;
n=5; Thermococcaceae|Rep: DNA repair and recombination
protein radB - Pyrococcus abyssi
Length = 239
Score = 40.7 bits (91), Expect = 0.049
Identities = 42/179 (23%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
++ T + LD +L GGV G + ++ G TGKT +Q+ +L+ + Y
Sbjct: 12 TLTTGVKGLDELLG-GGVARGVILQVYGPFATGKTTFAMQV-------GLLN--EGKVAY 61
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRIS 600
+DT F+P R K+ + + + ++P E+AL + + + ++++
Sbjct: 62 VDTEGGFSPERLKQ-----MAESRGLDP------EKALSKFIIFEPMDLNEQRRIISKLK 110
Query: 601 VFLAEHPRVKLIVIDSITFPFK-EGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
+++ + L+V+DS+T ++ EG + L +Q+ LQ +A + +AV++VN++
Sbjct: 111 TVVSD--KFSLVVVDSLTAHYRAEG---SRDHVELAKQLQVLQWLARKKNVAVIVVNQV 164
>UniRef50_Q99131 Cluster: REC2 protein; n=1; Ustilago maydis|Rep:
REC2 protein - Ustilago maydis (Smut fungus)
Length = 781
Score = 40.3 bits (90), Expect = 0.064
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1
Query: 256 SQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
S+ LD +L GGV+ LTEL+G G+GKTQ+ +Q+C
Sbjct: 230 SRELDDLLG-GGVRSAVLTELVGESGSGKTQMAIQVC 265
>UniRef50_A6STQ0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 383
Score = 39.9 bits (89), Expect = 0.085
Identities = 26/74 (35%), Positives = 40/74 (54%)
Frame = +1
Query: 256 SQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNT 435
S ++DH +GG+ G +TE+ G PG GKT L + L A +VL N +++D +
Sbjct: 41 STSVDH--NHGGIPRGKVTEIYGPPGVGKTTLGMHLAA-----RVLH-QNENVVWVDASH 92
Query: 436 NFTPTRFKEILTAS 477
+ RF +IL S
Sbjct: 93 PISGPRFSQILQES 106
>UniRef50_A4M8G8 Cluster: AAA ATPase; n=1; Petrotoga mobilis
SJ95|Rep: AAA ATPase - Petrotoga mobilis SJ95
Length = 423
Score = 39.5 bits (88), Expect = 0.11
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 187 NYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
N K+ L Q+ IPT Q +D++L NGG+ G++ L G PG GK+ L Q+
Sbjct: 22 NIKVPDIVFLDQELPPAKKIPTNFQEIDNVL-NGGLVEGAVYLLSGDPGIGKSTLLAQIA 80
Query: 367 ASVQ 378
S+Q
Sbjct: 81 KSIQ 84
>UniRef50_A2DYQ0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 288
Score = 39.5 bits (88), Expect = 0.11
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +1
Query: 538 RLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFK-EGISVQ-KRTGLLFRQ 711
+LH + + I + + V LIVIDSI P + + + +Q RT +L+
Sbjct: 151 KLHVLRVLDHPMLFSLTRTIPKLVNDIGNVGLIVIDSIAAPLRGQAVEMQGDRTSMLWEL 210
Query: 712 MADLQRIAMEGLIAVVLVNEMSTRXXXXXXXXXXXXXDAWXHRCNXRV 855
+ L+ IA+ IAV++ N +ST +W H C RV
Sbjct: 211 VKVLKSIAISKGIAVLITNHLST---VPFHGNVPSLGHSWSHACTHRV 255
Score = 33.5 bits (73), Expect = 7.4
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASV 375
G +TE+ G+PG+G+T LCL+ S+
Sbjct: 105 GVVTEICGIPGSGRTSLCLRYADSI 129
>UniRef50_Q22GU3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1047
Score = 39.1 bits (87), Expect = 0.15
Identities = 19/77 (24%), Positives = 38/77 (49%)
Frame = +1
Query: 448 TRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRV 627
T+ +E+L S + Q +E + E L +LH I + +FC + I L ++ +
Sbjct: 776 TQSQELLNLSQVNSQSLETLFETISENCLQKLHVIESHSQIEFCVNLRAIKHILTKNKSI 835
Query: 628 KLIVIDSITFPFKEGIS 678
++++ID + + E S
Sbjct: 836 RIVIIDEVNAFYVENES 852
>UniRef50_Q4Z9W4 Cluster: ORF021; n=4; unclassified Myoviridae|Rep:
ORF021 - Staphylococcus phage G1
Length = 418
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
IPT D+IL GG+ LG LTE+ GL G+GK+ + L
Sbjct: 41 IPTMVPQYDYILG-GGIPLGRLTEVYGLTGSGKSTFAVHL 79
>UniRef50_Q7S8S8 Cluster: Putative uncharacterized protein
NCU08806.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08806.1 - Neurospora crassa
Length = 298
Score = 38.7 bits (86), Expect = 0.20
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 262 NLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
+LD + GG+Q G +TE+ G PG GKT +QL A+
Sbjct: 58 SLDIEIVTGGIQKGQVTEIWGPPGVGKTAFGIQLAAN 94
>UniRef50_A7HJZ5 Cluster: DNA repair protein RadA; n=2;
Thermotogaceae|Rep: DNA repair protein RadA -
Fervidobacterium nodosum Rt17-B1
Length = 465
Score = 38.3 bits (85), Expect = 0.26
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +1
Query: 175 PNMSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLC 354
P+ + I++AT+L ++E I T ++D +L+ GG+ G + L G PG GK+ +
Sbjct: 57 PHPRFFDINSATKLLEEER----IKTGINSIDELLS-GGLIKGQVILLGGEPGVGKSTIA 111
Query: 355 LQLCASV 375
LQ+C S+
Sbjct: 112 LQICDSI 118
>UniRef50_Q9HJD3 Cluster: DNA repair and recombination protein radB;
n=5; Thermoplasmatales|Rep: DNA repair and recombination
protein radB - Thermoplasma acidophilum
Length = 229
Score = 37.9 bits (84), Expect = 0.34
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 2/168 (1%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
L NGG++ G +TE+ G G+GKT +C+ S + GL + +YID+ +P RF
Sbjct: 23 LLNGGLEGGIITEIFGEGGSGKTNICMIASCSA----MSQGL--KVIYIDSE-GLSPERF 75
Query: 457 KEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLI 636
+ + + K+ Y +++E + + S ++ +I
Sbjct: 76 LAVCRSD-ISMFKLFRVYSLDDQE-----------------VAIMKASKMADRDQKIGMI 117
Query: 637 VIDSIT--FPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
V+DS + F ++ Q R RQ++ L +A + I V++ N++
Sbjct: 118 VLDSFSEFFRLEKSDDRQARIAEFQRQLSLLSSVAAKKNIPVLITNQI 165
>UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|Rep:
DNA helicase - Xylella fastidiosa (strain Temecula1 /
ATCC 700964)
Length = 1190
Score = 37.5 bits (83), Expect = 0.45
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Frame = +1
Query: 169 TYPNMSNYKIHTATELWQKETCLPSIPTFSQNLDH---ILANGGVQLGSLTELL------ 321
T P + ++ + + E+ E CLP FSQ L H A Q +LT LL
Sbjct: 228 TTPQVPLFERYASGEMAPPELCLPPHAGFSQRLAHGSDKRALSRTQRDALTHLLVARQGE 287
Query: 322 -----GLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLK 486
G PGTGKT L L + AS+ L+G + + TN T + + K
Sbjct: 288 ILAVNGPPGTGKTTLVLSVVASLWAHAALAGGEPPVIVAASTTNQAVTNIIDAFEKNFAK 347
>UniRef50_Q1JSB1 Cluster: Putative uncharacterized protein; n=1;
Toxoplasma gondii|Rep: Putative uncharacterized protein
- Toxoplasma gondii
Length = 481
Score = 37.5 bits (83), Expect = 0.45
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +1
Query: 226 ETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCA 369
E+C +P + +DH L NGGV G L E+ G G GKTQ L L A
Sbjct: 93 ESC--PLPVGCRAVDHHL-NGGVPRGMLVEISGKAGCGKTQFALSLVA 137
>UniRef50_Q8G4G9 Cluster: Protein recA; n=1571; root|Rep: Protein
recA - Bifidobacterium longum
Length = 397
Score = 37.5 bits (83), Expect = 0.45
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
Q E + IPT S LD L GG+ G + E+ G +GKT L L + A+ Q
Sbjct: 49 QPEQNVEVIPTGSLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQ 101
>UniRef50_Q6MQS4 Cluster: RecA protein; n=1; Bdellovibrio
bacteriovorus|Rep: RecA protein - Bdellovibrio
bacteriovorus
Length = 240
Score = 37.1 bits (82), Expect = 0.60
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 238 PSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP-KVLSGLNAEA 414
P +PT LD L GV G L+ L G PGTG T L +++ +V K + +N +A
Sbjct: 46 PGLPTGVNVLDDFLLWKGVPQGDLSLLQGAPGTGATSLWIRIVQNVHSQNKWAAWINGDA 105
Query: 415 LYIDTNTNFTPTRFKEIL 468
+ + K++L
Sbjct: 106 QLFPAHLSSYKINLKKLL 123
>UniRef50_A4YKI5 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 389
Score = 37.1 bits (82), Expect = 0.60
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 6/175 (3%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP-KVLSGLNAE---ALYI--DTNTN 438
LA G + LG LT L G G+GKT++ QL SV G AE AL++ + +
Sbjct: 63 LAEGRIPLGDLTILAGNGGSGKTEIAAQLLVSVAAGLGDWLGCVAETGPALFLSCEEPED 122
Query: 439 FTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEH 618
R + I + I+ +L + L ++ G + + ++ ++ ++
Sbjct: 123 NVRDRVERIAKHRNIDPHGIDSLHLVFPDLDQTWLCNVDKSGKVQRTHLLQQLESWIVQN 182
Query: 619 PRVKLIVIDSITFPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEMSTR 783
+ L+ IDS+ F +G ++Q+R F +A L+++A E A++L++ S R
Sbjct: 183 -KPALVAIDSVAAVF-DGDAIQRRQVRAF--LAMLRKLAREQETAILLLDHPSVR 233
>UniRef50_Q76B91 Cluster: RadA-like protein; n=3; Oryza sativa|Rep:
RadA-like protein - Oryza sativa subsp. japonica (Rice)
Length = 619
Score = 37.1 bits (82), Expect = 0.60
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSG 399
Q E +P F + +L GGV GSL + G PG GK+ L LQL AS+ + +G
Sbjct: 217 QSEWRIPLSGNFGMEIARVLG-GGVVPGSLILVGGDPGVGKSSLILQL-ASIMSENIGAG 274
Query: 400 LNAEALYI 423
++ +Y+
Sbjct: 275 ESSAIVYV 282
>UniRef50_Q5CT97 Cluster: Possible AAA domain containing protein;
n=2; Cryptosporidium|Rep: Possible AAA domain containing
protein - Cryptosporidium parvum Iowa II
Length = 497
Score = 37.1 bits (82), Expect = 0.60
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKE 462
N + G + ++G G+GK+ L + L A +P+ + G + + YIDT++ F+ F E
Sbjct: 89 NTSFKPGDILGIMGSIGSGKSLLIMHLIAISILPEEIGGHDQKVYYIDTDSGFSIEVFTE 148
Query: 463 ILTASLLKCQKIEPSYLF 516
+++ + + ++ F
Sbjct: 149 KHLIPIIEKKLLNQNFYF 166
>UniRef50_Q24DN8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 318
Score = 37.1 bits (82), Expect = 0.60
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +1
Query: 196 IHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASV 375
+ A EL +K+ L ++ + LD +L GG+Q+G + EL G P +GK+ L +L
Sbjct: 67 LQNAKELLKKQQNLQNLTFGEKELDDLL-EGGLQIGKVYELSGYPCSGKSILAQKL---- 121
Query: 376 QIPKVLSGLNAEALYIDTNTNFTPTRF 456
I + A Y+D + F RF
Sbjct: 122 -ISQNFKCNQKGAWYLDISNQFNLKRF 147
>UniRef50_A7RQX3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 169
Score = 37.1 bits (82), Expect = 0.60
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 214 LWQKETCLPSIPTFSQNLDHIL--ANGGVQLGSLTELLGLPGTGKTQLCLQLC----ASV 375
+WQ+ C S P + N+ HIL NG V+ GSL ++G G GK+ L L A +
Sbjct: 67 VWQRIVC-KSTPAPNGNIKHILNDVNGTVKPGSLLAIMGASGAGKSTLMNVLAHRNIADM 125
Query: 376 QIPKVLSGLNAEALYIDTNT 435
Q+ + +N + +D NT
Sbjct: 126 QVSGTVM-VNERKVGLDINT 144
>UniRef50_Q5A2U1 Cluster: Putative uncharacterized protein RAD57;
n=1; Candida albicans|Rep: Putative uncharacterized
protein RAD57 - Candida albicans (Yeast)
Length = 511
Score = 37.1 bits (82), Expect = 0.60
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T ++D L GG+ +G +TE+ G G GK+ QL ++ K S ++ +YI
Sbjct: 85 ISTGLPSIDRELG-GGIPIGEVTEIFGASGCGKSHFLFQLLSN--CGKEFS--TSKNIYI 139
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIE-KFCACMNRIS 600
T + R K+ + + N + LDR+ YI +E + ++
Sbjct: 140 STESFLETKRLKDFIGRN-----------SSNIDTDLDRISYIYCQDLESQDHILFTQLP 188
Query: 601 VFL-AEHPRVKLIVIDSITFPFKEGISVQKRTGL 699
+ L ++ + KL+V+DSI F+ S+ T L
Sbjct: 189 LKLDSDKGKTKLLVLDSIAQHFRREDSIMNSTYL 222
>UniRef50_Q9PR61 Cluster: Protein recA; n=1; Ureaplasma parvum|Rep:
Protein recA - Ureaplasma parvum (Ureaplasma urealyticum
biotype 1)
Length = 334
Score = 37.1 bits (82), Expect = 0.60
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 223 KETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
K+ + +I T S ++D I G+ +G +TE+ G +GKT + LQ A Q
Sbjct: 32 KDEKINAISTGSIHIDQITGINGIPVGKITEIYGNESSGKTTIALQTIAECQ 83
>UniRef50_O78411 Cluster: Probable replicative DNA helicase (EC
3.6.1.-) [Contains: Gth dnaB intein]; n=1; Guillardia
theta|Rep: Probable replicative DNA helicase (EC
3.6.1.-) [Contains: Gth dnaB intein] - Guillardia theta
(Cryptomonas phi)
Length = 599
Score = 37.1 bits (82), Expect = 0.60
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 9/115 (7%)
Frame = +1
Query: 145 LNAYKKI*TYPNMSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLG 324
+N Y K + ++S + T E+ +K + T +LDHIL G+Q L + G
Sbjct: 145 INTYNKKVSLKSISQLLLETILEIDKKTNRSTHVLTGFFDLDHILV--GLQKSDLIIIAG 202
Query: 325 LPGTGKTQLCLQLCASV----QIPKVLSGL---NAEALY--IDTNTNFTPTRFKE 462
P GKT L L +V P V+ L + + +Y I TN +R +E
Sbjct: 203 RPSMGKTAFMLSLVRNVADIQSFPIVIFSLEMSSKQLIYRLISNETNIATSRLRE 257
>UniRef50_A7F7B8 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 683
Score = 36.7 bits (81), Expect = 0.79
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 193 KIHTATELWQ-KETCLP--SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
K+H T +Q K+ CL ++ + LDH+ +G V+ G+LT L+G G GKT L L +
Sbjct: 195 KLHRQTSTFQWKDICLDIKTVDGTCRILDHV--DGWVKPGTLTALMGPSGAGKTSL-LDV 251
Query: 364 CASVQIPKVLSG 399
AS ++SG
Sbjct: 252 LASRTSIGIVSG 263
>UniRef50_O27728 Cluster: DNA repair and recombination protein radB;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: DNA repair and recombination protein radB -
Methanobacterium thermoautotrophicum
Length = 234
Score = 36.7 bits (81), Expect = 0.79
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
IPT S ++D IL GGV+ ++T+ G PG+GKT + ++L + G N ++I
Sbjct: 13 IPTES-SIDRILG-GGVERRTITQFYGPPGSGKTNITIKLA----VETARRGKN--TVFI 64
Query: 424 DTNTNFTPTRFKEI 465
DT + R +++
Sbjct: 65 DTEGGLSVERIRQV 78
>UniRef50_Q97EC5 Cluster: DNA repair protein radA; n=2;
Clostridium|Rep: DNA repair protein radA - Clostridium
acetobutylicum
Length = 450
Score = 36.3 bits (80), Expect = 1.0
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 250 TFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
T + L+ +L GG+ GS+T + G PG GK+ L LQ+C + +
Sbjct: 69 TNNTELNRVLG-GGLVKGSITLISGAPGIGKSTLLLQICQDIAL 111
>UniRef50_Q8I1P4 Cluster: Putative uncharacterized protein PFD0935c;
n=3; Plasmodium|Rep: Putative uncharacterized protein
PFD0935c - Plasmodium falciparum (isolate 3D7)
Length = 346
Score = 36.3 bits (80), Expect = 1.0
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 253 FSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCA 369
+ + L++ NG + SL E++G GTGKTQL L +CA
Sbjct: 26 YDEKLNYFFENGVINY-SLLEIVGECGTGKTQLALTICA 63
>UniRef50_Q12XV7 Cluster: KaiC; n=1; Methanococcoides burtonii DSM
6242|Rep: KaiC - Methanococcoides burtonii (strain DSM
6242)
Length = 301
Score = 36.3 bits (80), Expect = 1.0
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +1
Query: 178 NMSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCL 357
++ + K + ++ + + + T LD +L GGV GS + G PGTGKT LC+
Sbjct: 40 SLDSTKFKSKIDINNIDKVIKRVSTGVAGLDDML-EGGVPKGSSVIVTGPPGTGKTTLCM 98
Query: 358 Q 360
Q
Sbjct: 99 Q 99
>UniRef50_P43705 Cluster: Protein recA; n=176; root|Rep: Protein
recA - Haemophilus influenzae
Length = 354
Score = 36.3 bits (80), Expect = 1.0
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
SI T S LD L GG+ +G + E+ G +GKT L L + A Q
Sbjct: 40 SISTGSLGLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIAQAQ 85
>UniRef50_UPI00005889FA Cluster: PREDICTED: similar to LOC553395
protein; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC553395 protein -
Strongylocentrotus purpuratus
Length = 365
Score = 35.9 bits (79), Expect = 1.4
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPK-----VLSGLNAEALYIDTNTNFTPTRFKEI 465
G + E+ G G+GKT+L L L A +P+ + GL ++IDT+ F+ R +
Sbjct: 32 GDVVEIYGNSGSGKTELLLNLAAMCILPERWKTIDIGGLGTSVVFIDTDHQFSMLRLFAL 91
Query: 466 L 468
L
Sbjct: 92 L 92
>UniRef50_Q8C610 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4930447F14 product:disrupted
meiotic cDNA 1 homolog, full insert sequence; n=32;
Eukaryota|Rep: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4930447F14 product:disrupted
meiotic cDNA 1 homolog, full insert sequence - Mus
musculus (Mouse)
Length = 285
Score = 35.9 bits (79), Expect = 1.4
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA + ++ + I T SQ D +L GG++ ++TE G TGKTQL LC Q+
Sbjct: 87 TAFQYSERRKMVFHITTGSQEFDKLLG-GGIESMAITEAFGEFRTGKTQLSHTLCGEHQM 145
>UniRef50_A6NUV1 Cluster: DNA repair protein radA; n=1; Bacteroides
capillosus ATCC 29799|Rep: DNA repair protein radA -
Bacteroides capillosus ATCC 29799
Length = 460
Score = 35.9 bits (79), Expect = 1.4
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 250 TFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASV-QIPKVL 393
T LD +L G V+ GSL + G PG GK+ L LQ+C ++ + KVL
Sbjct: 80 TGMSELDRVLGGGAVK-GSLVLVGGAPGIGKSTLMLQICDNLCRFAKVL 127
>UniRef50_A5NQF2 Cluster: KaiC domain protein; n=1; Methylobacterium
sp. 4-46|Rep: KaiC domain protein - Methylobacterium sp.
4-46
Length = 501
Score = 35.9 bits (79), Expect = 1.4
Identities = 24/59 (40%), Positives = 30/59 (50%)
Frame = +1
Query: 238 PSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEA 414
P +P LD +L +GG+ L S T L G G GKT L LQ S P +L G + A
Sbjct: 256 PKVPLGVPALDGML-DGGLPLHSTTLLAGPSGIGKTTLGLQFLGSGAEPGLLVGFHESA 313
Score = 33.9 bits (74), Expect = 5.6
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLC 366
L +PT LD IL GG+ G + + G PG+GKT L Q+C
Sbjct: 17 LERVPTGIAGLDEILG-GGLFEGGVYIVQGTPGSGKTILANQVC 59
>UniRef50_Q4CZQ5 Cluster: DNA repair protein, putative; n=2;
Trypanosoma cruzi|Rep: DNA repair protein, putative -
Trypanosoma cruzi
Length = 393
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 250 TFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
T S +D +L +GGV G++ E+ G P GK+ L Q+ A+
Sbjct: 45 TGSAAIDRLLPDGGVACGTVLEIFGPPAAGKSHLVQQMVAA 85
>UniRef50_O75771-4 Cluster: Isoform 4 of O75771 ; n=1; Homo
sapiens|Rep: Isoform 4 of O75771 - Homo sapiens (Human)
Length = 283
Score = 35.5 bits (78), Expect = 1.8
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Frame = +1
Query: 520 EEEALDRLHYINAFGIEKFCACMNRISVFLAEHPR-----VKLIVIDSITFPFKEGISVQ 684
+ EAL R+ ++AF I + + + +A+ VK++V+DS+T + Q
Sbjct: 115 QAEALRRIQVVHAFDIFQMLDVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVSPLLGGQ 174
Query: 685 KRTGL-LFRQMA-DLQRIAMEGLIAVVLVNEMS 777
+R GL L Q+A +L+ +A + +AVV+ N ++
Sbjct: 175 QREGLALMMQLARELKTLARDLGMAVVVTNHIT 207
>UniRef50_Q17VK6 Cluster: Putative uncharacterized protein Hac
prophage II orf8; n=1; Helicobacter acinonychis str.
Sheeba|Rep: Putative uncharacterized protein Hac
prophage II orf8 - Helicobacter acinonychis (strain
Sheeba)
Length = 383
Score = 35.5 bits (78), Expect = 1.8
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 211 ELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQ-LCASVQIPK 387
E +Q + + IPT + LD L GG ++G + L G P GKT L +Q L ++Q K
Sbjct: 139 EFFQNQPAIEKIPTGLRFLDD-LTEGGFEVGQMVLLSGDPEAGKTLLGVQVLVQAMQTSK 197
Query: 388 V 390
V
Sbjct: 198 V 198
>UniRef50_Q13T84 Cluster: Putative uncharacterized protein; n=2;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia xenovorans (strain LB400)
Length = 235
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLG-LPGTGKTQLCLQLCASVQIPKVL 393
L H L GG +G+LTE+L PG+G+ +L AS++ P VL
Sbjct: 37 LSHELPGGGWPIGALTEVLAQAPGSGEMRLLAPALASLKAPVVL 80
>UniRef50_A6G4M7 Cluster: DNA repair protein radA; n=1; Plesiocystis
pacifica SIR-1|Rep: DNA repair protein radA -
Plesiocystis pacifica SIR-1
Length = 473
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 265 LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASV 375
LD +L GG+ GSL L G PG GK+ L LQ CA +
Sbjct: 86 LDRVLG-GGLVPGSLVLLGGAPGIGKSTLILQACAGL 121
>UniRef50_A0GFK5 Cluster: RAD55; n=2; Burkholderia|Rep: RAD55 -
Burkholderia phytofirmans PsJN
Length = 531
Score = 35.5 bits (78), Expect = 1.8
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 262 NLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
+LD +L G Q GS T L+G G GKT LCLQ A+
Sbjct: 294 HLDGLLGGGFAQ-GSTTTLVGPSGVGKTLLCLQFLAA 329
>UniRef50_Q4FY15 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 650
Score = 35.5 bits (78), Expect = 1.8
Identities = 24/65 (36%), Positives = 30/65 (46%)
Frame = +1
Query: 250 TFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDT 429
T LD L GG + G +TE+ G G GKTQL LQ V A AL + +
Sbjct: 283 TGCMGLDQALGGGGFRSGWVTEVYGEAGAGKTQLGLQCLLQQAATDVCHA--AVALALAS 340
Query: 430 NTNFT 444
+FT
Sbjct: 341 GADFT 345
>UniRef50_Q18FI4 Cluster: DNA repair and recombination protein RadB;
n=2; Halobacteriaceae|Rep: DNA repair and recombination
protein RadB - Haloquadratum walsbyi (strain DSM 16790)
Length = 257
Score = 35.5 bits (78), Expect = 1.8
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+ T Q+LD +L GG + G++T++ G P GKT + L + ++ A+Y+
Sbjct: 5 LSTGCQSLDSLLG-GGFERGTVTQVYGPPAAGKTNIMLSAALHT------AATDSMAVYV 57
Query: 424 DTNTNFTPTRFKEI 465
DT + RF++I
Sbjct: 58 DTE-GISSDRFRQI 70
>UniRef50_A0RYZ3 Cluster: RecA/RadA recombinase related protein;
n=1; Cenarchaeum symbiosum|Rep: RecA/RadA recombinase
related protein - Cenarchaeum symbiosum
Length = 218
Score = 35.5 bits (78), Expect = 1.8
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GG++ G +T++ G P +GK+Q+ ++CA + G ++ DT+ P R +I
Sbjct: 15 GGLRGGFITDIFGPPASGKSQIAFEICAGA----LAEG--GRVIFHDTSGTLRPERILQI 68
Query: 466 L 468
L
Sbjct: 69 L 69
>UniRef50_Q2IEE4 Cluster: Protein recA; n=1; Anaeromyxobacter
dehalogenans 2CP-C|Rep: Protein recA - Anaeromyxobacter
dehalogenans (strain 2CP-C)
Length = 494
Score = 35.1 bits (77), Expect = 2.4
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
L + T + LD +L GG+ S+T + G PG+GKT L LQ+
Sbjct: 10 LERVSTGVEGLDQVLG-GGIPAKSITVVSGEPGSGKTVLALQM 51
>UniRef50_Q0YMC6 Cluster: ATPase; n=1; Geobacter sp. FRC-32|Rep:
ATPase - Geobacter sp. FRC-32
Length = 488
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQ 360
+++T IPT LD IL GG+ G + L G PGTGKT LQ
Sbjct: 2 EEKTFSALIPTGVPGLDDIL-RGGLTEGKMYLLSGSPGTGKTTFSLQ 47
>UniRef50_A3ZNU6 Cluster: RecA protein; n=1; Blastopirellula marina
DSM 3645|Rep: RecA protein - Blastopirellula marina DSM
3645
Length = 392
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +1
Query: 214 LWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVL 393
L + IPT S +LD L G+ G + E+ G +GKT L L + A Q +
Sbjct: 67 LGSNHAVIEGIPTGSISLDLALGGKGLPRGRVIEIFGPESSGKTTLALHVIAQAQ---AM 123
Query: 394 SGLNAEALYIDTNTNFTPTRFKEI 465
G+ A ++D P+ K++
Sbjct: 124 GGI---AAFVDAEHALDPSWAKKL 144
>UniRef50_Q389E0 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 379
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +1
Query: 250 TFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
T S+ LD +L +GG+ G++ E+ G P GK++L ++ +S
Sbjct: 35 TGSEELDRLLPDGGMTCGTVLEVFGPPSGGKSRLVRRMISS 75
>UniRef50_Q2USE9 Cluster: Predicted protein; n=6;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 375
Score = 35.1 bits (77), Expect = 2.4
Identities = 35/124 (28%), Positives = 55/124 (44%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKE 462
+ G+ G +TE+ G PG GKT L L + S + +G + ++IDT + R
Sbjct: 65 SNGIPCGHVTEVYGPPGAGKTSLALSVATSA----LRNG--DKVIWIDTGSPLPKVR--- 115
Query: 463 ILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVI 642
L + L K S L E+ + L Y +A + A + R KL+VI
Sbjct: 116 -LASMLKKSPDATSSDL--PEDPIKNLIYFHARSLPHLLALLIRPPKGFPPED-AKLLVI 171
Query: 643 DSIT 654
DS++
Sbjct: 172 DSVS 175
>UniRef50_P35901 Cluster: Protein recA (Recombinase A) [Contains:
Mle recA intein]; n=33; Bacteria|Rep: Protein recA
(Recombinase A) [Contains: Mle recA intein] -
Mycobacterium leprae
Length = 711
Score = 35.1 bits (77), Expect = 2.4
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 226 ETCLPS--IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ-IPKVLS 396
E C P IPT S LD L GG+ G + E+ G +GKT + L A+ Q + V +
Sbjct: 33 EMCQPISVIPTGSIALDVALGIGGLPRGRIVEIYGPESSGKTTVALHAVANAQAVGGVAA 92
Query: 397 GLNAE 411
++AE
Sbjct: 93 FIDAE 97
>UniRef50_UPI000067400A Cluster: hypothetical protein
Bpse4_03000170; n=1; Burkholderia pseudomallei 406e|Rep:
hypothetical protein Bpse4_03000170 - Burkholderia
pseudomallei 406e
Length = 386
Score = 34.7 bits (76), Expect = 3.2
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 181 MSNYKIHTATELWQKETCLPS--IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLC 354
++ Y + E+ + PS IPT ++LD L +GG+ G L + G PG GK+ L
Sbjct: 89 VNEYLVPVVEEIDARARGEPSKVIPTGFRDLDDAL-DGGMNAGELIVIAGRPGMGKSALA 147
Query: 355 LQLCASV 375
L + A+V
Sbjct: 148 LGVGANV 154
>UniRef50_Q2IIA2 Cluster: Protein recA; n=2; Anaeromyxobacter|Rep:
Protein recA - Anaeromyxobacter dehalogenans (strain
2CP-C)
Length = 226
Score = 34.7 bits (76), Expect = 3.2
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCA 369
++E C+PS +D L GG G+L EL G P +GKT + L L A
Sbjct: 27 RREGCVPS---GLAEVDAALPGGGFPRGALCELAGGPASGKTAVALSLLA 73
>UniRef50_A3JHF4 Cluster: Putative superfamily I DNA helicase; n=1;
Marinobacter sp. ELB17|Rep: Putative superfamily I DNA
helicase - Marinobacter sp. ELB17
Length = 1176
Score = 34.7 bits (76), Expect = 3.2
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = +1
Query: 169 TYPNMSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQ 348
+YP +S + T W T PS+ + A+ ++ G + + G PGTGKT
Sbjct: 260 SYPCISVSTLRTTGIKWG--TLQPSVTLSDDQTRAVHASLSMKEGDVLAINGPPGTGKTA 317
Query: 349 LCLQLCASVQIPKVLSGLNAEALYIDTNTN 438
+ ++ AS + VL+ + I + N
Sbjct: 318 ILKEIVASAVVRSVLTNKPPPLMAISSTNN 347
>UniRef50_A5K559 Cluster: Putative uncharacterized protein; n=4;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 385
Score = 34.7 bits (76), Expect = 3.2
Identities = 17/70 (24%), Positives = 34/70 (48%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRF 456
+ NG ++ + G GKT L ++ A + K L+G+N + +Y+D + F +
Sbjct: 38 IKNGTLKEADSVCIYGREKCGKTLLLTEIVAEMTAVKELNGMNCKVVYLDCDLTFNYKNY 97
Query: 457 KEILTASLLK 486
+ I+ + K
Sbjct: 98 ESIIGKKINK 107
>UniRef50_Q1DNF7 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 436
Score = 34.7 bits (76), Expect = 3.2
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 23/189 (12%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GGVQ G +TEL+G +GKT L + L A +VL +++DT +R + +
Sbjct: 83 GGVQRGEVTELVGPRASGKTVLAMSLAA-----EVLRS-QRSVVWVDTAGPMCVSRLESL 136
Query: 466 LTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVID 645
L + + L RL + + + A ++ LIVID
Sbjct: 137 LHGKENVTEDGPSQATGRKSHLLQRLLHFHPLSLAHLVALVSHPPRGFPPE-NTGLIVID 195
Query: 646 SITFPF-------------------KEGISVQKRTGLLFR----QMADLQRIAMEGLIAV 756
SI+ F E + K + L F ++DL+R+A+ AV
Sbjct: 196 SISCLFAAEFRPRLPKRLRETKLSRTEQAKLDKESRLYFNLIGSLVSDLRRLAVRFNCAV 255
Query: 757 VLVNEMSTR 783
V++NEM++R
Sbjct: 256 VVINEMASR 264
>UniRef50_Q5V0B5 Cluster: Circadian regulator; n=1; Haloarcula
marismortui|Rep: Circadian regulator - Haloarcula
marismortui (Halobacterium marismortui)
Length = 241
Score = 34.7 bits (76), Expect = 3.2
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 259 QNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQ 360
+ LD IL NGG+ S T + G PG GK+ LCLQ
Sbjct: 10 EGLDDIL-NGGIVKNSTTLVSGNPGAGKSILCLQ 42
>UniRef50_O93773 Cluster: Recombination/repair protein RadA; n=1;
uncultured archaeon 'Antarctica #17'|Rep:
Recombination/repair protein RadA - uncultured archaeon
'Antarctica #17'
Length = 131
Score = 34.7 bits (76), Expect = 3.2
Identities = 33/109 (30%), Positives = 48/109 (44%)
Frame = +1
Query: 343 TQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNE 522
TQ C L A + I K N + ++ID F P R EIL A L E S +
Sbjct: 1 TQFCYSLTAEI-IAK-----NDKVIWIDCEDTFKPKRLVEILLARDLVPD--EDSAI--- 49
Query: 523 EEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKE 669
+ LD + Y+ E +N ++ + + R KL+VID F+E
Sbjct: 50 -DLLDNITYLYTPNTENLMGTVNNLTKLMLD-DRPKLVVIDGAIGQFRE 96
>UniRef50_Q4UL56 Cluster: DNA repair protein radA homolog; n=18;
Rickettsiaceae|Rep: DNA repair protein radA homolog -
Rickettsia felis (Rickettsia azadi)
Length = 446
Score = 34.7 bits (76), Expect = 3.2
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
IPT L+ +L GG+ LGS + G PG GK+ L LQL AS
Sbjct: 66 IPTPIGELNRVLG-GGLVLGSAILIGGDPGIGKSTLLLQLAAS 107
>UniRef50_Q7UK01 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 412
Score = 34.3 bits (75), Expect = 4.2
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = -2
Query: 467 KISLNLVGVKFVLVSMYSA--SAFNPLKTFGICTEAQSCKHNCVFPVPGRPSNSVSEPNC 294
+IS + + + V Y + FNPL+T + A S + N PS+S ++P+
Sbjct: 162 RISASPIQISVAEVQAYDSVFGQFNPLRTSAVLNTAASVRQNATAQTANGPSSSEAQPSS 221
Query: 293 TPP 285
T P
Sbjct: 222 TGP 224
>UniRef50_Q034K4 Cluster: Protein recA; n=5; Bacteria|Rep: Protein
recA - Lactobacillus casei (strain ATCC 334)
Length = 397
Score = 34.3 bits (75), Expect = 4.2
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +1
Query: 262 NLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNF 441
+LD L GG+ G + E+ G TGKT + LQ A +Q SG +A YID
Sbjct: 59 SLDLALGVGGLPRGRIVEVYGPESTGKTTIALQTIAELQ----KSG--GKAAYIDAENAM 112
Query: 442 TPTRFKEI 465
P E+
Sbjct: 113 DPKYAAEL 120
>UniRef50_A7CKV4 Cluster: Replicative DNA helicase; n=1; Ralstonia
pickettii 12D|Rep: Replicative DNA helicase - Ralstonia
pickettii 12D
Length = 455
Score = 34.3 bits (75), Expect = 4.2
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 220 QKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASV 375
+ E + +IPT Q+LD L GG++ G L + G P GKT L +C +V
Sbjct: 173 EAEGKVKAIPTGFQDLDAKLG-GGMRGGELLIVAGRPAMGKTAFVLNICNNV 223
>UniRef50_A2WXE2 Cluster: Putative uncharacterized protein; n=5;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 739
Score = 34.3 bits (75), Expect = 4.2
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 7/105 (6%)
Frame = +1
Query: 301 GSLTELLGLPGTGKTQLCLQLCASVQIPK-----VLSGLNAEALYIDTNTNFTPTRFKEI 465
G++ E+ G +GK+QL L +PK GL +Y+D + F R ++
Sbjct: 502 GNVVEIAGPSNSGKSQLLLTAAVQCILPKEWKGTYFGGLGKVVMYLDLDCRFDVLRLAQV 561
Query: 466 LTASLLK-CQKIEPSYLFNEEEALDRLHYINAFGIEK-FCACMNR 594
L + + C P+ NEE A D N+F F CM R
Sbjct: 562 LRNRIGECCGSTNPT---NEEFAKDGA--TNSFSENTLFSECMKR 601
>UniRef50_Q2UBC3 Cluster: Pleiotropic drug resistance proteins; n=2;
Aspergillus|Rep: Pleiotropic drug resistance proteins -
Aspergillus oryzae
Length = 1392
Score = 34.3 bits (75), Expect = 4.2
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +1
Query: 283 NGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGL 402
+G +Q G +T L+G+ G GKT L L +QI ++ GL
Sbjct: 787 SGWLQPGKMTALMGMSGAGKTTLLDTLAQRIQIGRLSGGL 826
>UniRef50_A3LTU6 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 541
Score = 34.3 bits (75), Expect = 4.2
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
I T LD L GG+ G +TE+ G G GK+ + QL Q+ + G E ++I
Sbjct: 88 ISTGLHTLDSDLG-GGIPTGEITEIFGSSGCGKSHMLAQLAMECQLNE---GDCKECIHI 143
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSY-LFNEEEALDRLHYINAFGIE-KFCACMNRI 597
T +F T+ + +I+ SY +LD + YI +E + ++
Sbjct: 144 GTE-SFLETK----------RLHQIQQSYESKGSTVSLDNISYIYCQDLESQDHIIYTQL 192
Query: 598 SVFL-AEHPRVKLIVIDSI 651
+ L ++ +V+L+VIDSI
Sbjct: 193 PIHLESKAGKVRLLVIDSI 211
>UniRef50_A2QYT7 Cluster: Similarity to hypothetical ATP-binding
protein SCCB12.04 -Streptomyces coelicolor; n=2;
cellular organisms|Rep: Similarity to hypothetical
ATP-binding protein SCCB12.04 -Streptomyces coelicolor -
Aspergillus niger
Length = 1139
Score = 34.3 bits (75), Expect = 4.2
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEA 414
L S P Q+ + I G + G L L+G PGTGKT +C L AS +P+ +NAE
Sbjct: 702 LGSQPAILQSCEFIEWMRGEERGLL--LVGPPGTGKTSVCTFLIAS-YLPR---HVNAET 755
Query: 415 LY 420
LY
Sbjct: 756 LY 757
>UniRef50_Q5JDP8 Cluster: ATPase, RecA superfamily; n=1;
Thermococcus kodakarensis KOD1|Rep: ATPase, RecA
superfamily - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 448
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/40 (47%), Positives = 23/40 (57%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
IPT +LD L NGG GS L G PG+GKT L + +
Sbjct: 4 IPTGIPSLDKAL-NGGFSRGSTILLAGNPGSGKTHLAIHV 42
>UniRef50_P65954 Cluster: DNA repair protein radA homolog; n=43;
Actinobacteria (class)|Rep: DNA repair protein radA
homolog - Mycobacterium bovis
Length = 480
Score = 34.3 bits (75), Expect = 4.2
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 247 PTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQL 363
PT LD +L GG+ GS+T L G PG GK+ L L++
Sbjct: 71 PTGIDELDRVLG-GGIVPGSVTLLAGDPGVGKSTLLLEV 108
>UniRef50_Q9PK96 Cluster: DNA repair protein radA homolog; n=9;
Chlamydiales|Rep: DNA repair protein radA homolog -
Chlamydia muridarum
Length = 455
Score = 34.3 bits (75), Expect = 4.2
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = +1
Query: 169 TYPNMSNYKIHTATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQ 348
+YP S + T +Q+E I T S+ + +L GG GSLT L G PG GK+
Sbjct: 48 SYPLSSTTPVPLNTVKFQEEI---RISTRSKGWNRLLG-GGTVCGSLTLLGGEPGIGKST 103
Query: 349 LCLQL 363
L LQ+
Sbjct: 104 LLLQI 108
>UniRef50_Q8DI25 Cluster: Tll1767 protein; n=1; Synechococcus
elongatus|Rep: Tll1767 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 740
Score = 33.9 bits (74), Expect = 5.6
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 214 LWQKETCLPSIPT---FSQNLDHILAN-GGVQLG-SLTELLGLPGTGKTQLCLQL 363
LWQ LP++ F ++ H+LAN V LG SL + LPG G+T + L L
Sbjct: 538 LWQVTQVLPTVGEGMKFQESFHHLLANLQAVGLGQSLAIISALPGDGRTTVALHL 592
>UniRef50_Q2LQF2 Cluster: MoxR-like ATPase with AAA domain; n=5;
Deltaproteobacteria|Rep: MoxR-like ATPase with AAA
domain - Syntrophus aciditrophicus (strain SB)
Length = 283
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +1
Query: 316 LLGLPGTGKTQLCLQLCASVQIPKVLSGLNA-----EALY-IDTNTNFTPTRF 456
L G PGTGKT L + S+Q+P ++ + + EALY DT T +RF
Sbjct: 38 LKGEPGTGKTMLAHAIAESLQMPLIILNVKSSMKLLEALYQYDTLTRLNDSRF 90
>UniRef50_Q2JUA6 Cluster: Replicative DNA helicase; n=2;
Synechococcus|Rep: Replicative DNA helicase -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 591
Score = 33.9 bits (74), Expect = 5.6
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 211 ELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASV 375
E +Q +P IPT +LD++ G+Q L L G P GKT L L + +V
Sbjct: 179 ERFQSGAQIPGIPTKFIDLDNLTQ--GLQRSDLVILAGRPSMGKTSLALNIAQNV 231
>UniRef50_Q0AUE9 Cluster: DNA repair protein RadA; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
DNA repair protein RadA - Syntrophomonas wolfei subsp.
wolfei (strain Goettingen)
Length = 451
Score = 33.9 bits (74), Expect = 5.6
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 3/106 (2%)
Frame = +1
Query: 247 PTFSQNLDHI--LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
P FS L + GG+ GSL L G PG GK+ L LQ+ +++ LY
Sbjct: 64 PRFSSGLSEFDRVLGGGIVPGSLILLGGDPGIGKSTLLLQVAG------LIAAAGKRILY 117
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLH-YIN 555
+ + R L AS L + +L NE++ +D LH YIN
Sbjct: 118 LSGEESLQQIR----LRASRLGINN-DTIFLLNEQD-IDLLHEYIN 157
>UniRef50_Q7RW81 Cluster: Putative uncharacterized protein
NCU03852.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU03852.1 - Neurospora crassa
Length = 1405
Score = 33.9 bits (74), Expect = 5.6
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +1
Query: 184 SNYKIHTATELWQKE---TCLP-SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQL 351
++ K +T W+++ T LP S+P S L I+ N L LGLP TG QL
Sbjct: 719 TSIKFNTKNPFWREDCEFTDLPPSLPYLSVVLKRIVGNTESFSHQLQATLGLPKTG--QL 776
Query: 352 CLQLCASVQIP 384
LC +V IP
Sbjct: 777 SEALCGAVDIP 787
>UniRef50_Q8RY99 Cluster: DNA repair protein recA homolog 2,
mitochondrial precursor; n=1; Arabidopsis thaliana|Rep:
DNA repair protein recA homolog 2, mitochondrial
precursor - Arabidopsis thaliana (Mouse-ear cress)
Length = 389
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
I T S NLD L GG+ G + E+ G +GKT L L + Q
Sbjct: 97 ISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALHIIKEAQ 141
>UniRef50_P37572 Cluster: DNA repair protein radA homolog; n=50;
Bacteria|Rep: DNA repair protein radA homolog - Bacillus
subtilis
Length = 458
Score = 33.9 bits (74), Expect = 5.6
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = +1
Query: 238 PSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEAL 417
P + T + +L GGV GSL + G PG GK+ L LQ+ A LSG + L
Sbjct: 71 PRVKTQLGEFNRVLG-GGVVKGSLVLIGGDPGIGKSTLLLQVSAQ------LSGSSNSVL 123
Query: 418 YIDTNTNFTPTRFK 459
YI + T+ +
Sbjct: 124 YISGEESVKQTKLR 137
>UniRef50_Q84GE9 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium glutamicum|Rep: Putative uncharacterized
protein - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 622
Score = 33.5 bits (73), Expect = 7.4
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASV 375
GG+ +G+LT + G PG GK+ +C L A +
Sbjct: 318 GGIPVGALTIITGKPGDGKSTMCRWLAACI 347
>UniRef50_Q08N73 Cluster: Protein recA; n=2; Cystobacterineae|Rep:
Protein recA - Stigmatella aurantiaca DW4/3-1
Length = 293
Score = 33.5 bits (73), Expect = 7.4
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Frame = +1
Query: 229 TCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCL----------QLCASVQ 378
+ L ++ T + +D +L +GG LG EL G +G+T L L +LCA V
Sbjct: 29 SALATLRTGVEEVDALLPSGGFPLGQALELCGEMASGRTSLALRAVAAAHQERRLCAWVD 88
Query: 379 IPKVLSGLNAEALYID 426
PK L A A+ +D
Sbjct: 89 GPKELYPPAAAAMGVD 104
>UniRef50_Q01QX0 Cluster: RecA domain protein; n=1; Solibacter
usitatus Ellin6076|Rep: RecA domain protein - Solibacter
usitatus (strain Ellin6076)
Length = 224
Score = 33.5 bits (73), Expect = 7.4
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 217 WQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
WQ +PT ++D A GG+ G LTE++G +G+T L L + A+
Sbjct: 20 WQSRPEPELVPTGVADVDS--ATGGLPRGCLTEIVGPASSGRTSLLLSILAA 69
>UniRef50_A5CY68 Cluster: Putative uncharacterized protein; n=1;
Pelotomaculum thermopropionicum SI|Rep: Putative
uncharacterized protein - Pelotomaculum
thermopropionicum SI
Length = 665
Score = 33.5 bits (73), Expect = 7.4
Identities = 19/38 (50%), Positives = 21/38 (55%)
Frame = +1
Query: 292 VQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLN 405
+ LG LT L G PG GKT L LQL A V GL+
Sbjct: 285 IPLGKLTILEGDPGVGKTWLALQLAAIVSRGDPFPGLD 322
>UniRef50_Q95XK7 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 1173
Score = 33.5 bits (73), Expect = 7.4
Identities = 28/103 (27%), Positives = 45/103 (43%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+IP +D IL NG ++ G + L G G TQ+ + +PK L L + Y
Sbjct: 839 AIPGLGTTIDVILVNGTMRAGDVIVLTGSDGAITTQV-----RELLMPKPLKELRVKNEY 893
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHY 549
I R ++L +L K P Y+ + E+ +D L +
Sbjct: 894 IHYK-EVKGARGVKVLAKNLEKVLAGLPIYITDREDEVDYLRH 935
>UniRef50_Q0GFE8 Cluster: Eukaryotic translation initiation factor
eIF5B; n=2; Caenorhabditis|Rep: Eukaryotic translation
initiation factor eIF5B - Caenorhabditis elegans
Length = 1074
Score = 33.5 bits (73), Expect = 7.4
Identities = 28/103 (27%), Positives = 45/103 (43%)
Frame = +1
Query: 241 SIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALY 420
+IP +D IL NG ++ G + L G G TQ+ + +PK L L + Y
Sbjct: 719 AIPGLGTTIDVILVNGTMRAGDVIVLTGSDGAITTQV-----RELLMPKPLKELRVKNEY 773
Query: 421 IDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHY 549
I R ++L +L K P Y+ + E+ +D L +
Sbjct: 774 IHYK-EVKGARGVKVLAKNLEKVLAGLPIYITDREDEVDYLRH 815
>UniRef50_A6NFW4 Cluster: Uncharacterized protein ENSP00000365736;
n=1; Homo sapiens|Rep: Uncharacterized protein
ENSP00000365736 - Homo sapiens (Human)
Length = 406
Score = 33.5 bits (73), Expect = 7.4
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = -1
Query: 882 HPIHSDGQQYPXVATMXPGVAQRAHHSTTGQTQSCAHLIYQHHCYQXFHGYS 727
H +H+D + + T H+ T T++C H +HH Y+ H ++
Sbjct: 101 HTVHTDMHTHSQICTSHRHTCTH-RHTDTSYTETCTHTDNEHHTYRHTHTHT 151
>UniRef50_P24517 Cluster: DNA repair protein radA; n=195;
Bacteria|Rep: DNA repair protein radA - Salmonella
typhimurium
Length = 460
Score = 33.5 bits (73), Expect = 7.4
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQ-LCASVQIPKVLSGLNAE 411
LP T + D +L GGV GS + G PG GK+ L LQ LC + K L E
Sbjct: 74 LPRFSTGFKEFDRVLG-GGVVPGSAILIGGNPGAGKSTLLLQTLCKLAEQMKTLYVTGEE 132
Query: 412 AL 417
+L
Sbjct: 133 SL 134
>UniRef50_UPI0000DADEB2 Cluster: ABC transporter, ATP-binding
protein; n=1; Coxiella burnetii Dugway 7E9-12|Rep: ABC
transporter, ATP-binding protein - Coxiella burnetii
Dugway 7E9-12
Length = 534
Score = 33.1 bits (72), Expect = 9.8
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +1
Query: 316 LLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQK 495
++G G GKT L L+L A + PK S + +L + N+ PT+ E + +L K
Sbjct: 37 IIGDNGVGKTTL-LKLIAQIIKPKQGS-VQTNSLVVSCPQNYEPTKANETVAETLGIADK 94
Query: 496 IEPSYLFNEEEALDRLHYI 552
+E N+ + DR + I
Sbjct: 95 LEALARINQGDFHDRNYEI 113
>UniRef50_UPI000023D3E1 Cluster: hypothetical protein FG09716.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG09716.1 - Gibberella zeae PH-1
Length = 407
Score = 33.1 bits (72), Expect = 9.8
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQL 351
GGVQ G +TE+ G PG+GKT L
Sbjct: 82 GGVQRGQVTEIWGPPGSGKTAL 103
>UniRef50_Q4RHK8 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 232
Score = 33.1 bits (72), Expect = 9.8
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = +1
Query: 229 TCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNA 408
+CL ++P+ + LDH L V+L S+ L G P T + LC + + + L+
Sbjct: 104 SCLFTVPSSPEELDHRLREHMVELESIELLPGTPTVRGTVRVVNLCYTKSV-HIRMSLDR 162
Query: 409 EALYIDTNTNFTP 447
A + D ++ P
Sbjct: 163 WATHFDLLADYVP 175
>UniRef50_Q7VHE2 Cluster: Putative uncharacterized protein; n=1;
Helicobacter hepaticus|Rep: Putative uncharacterized
protein - Helicobacter hepaticus
Length = 836
Score = 33.1 bits (72), Expect = 9.8
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +1
Query: 142 ILNAYKKI*TYPNMSNYKIHTATELWQKETC--LPSIPTFSQNLDHILANGGVQLGSLTE 315
+L Y++I T P S I+ +++++ P I F N A ++
Sbjct: 80 LLKEYERIQTIPKQSALSIYLNPSSFKQDSINESPLIFPFGANKSQYEAVQNAMGSQISV 139
Query: 316 LLGLPGTGKTQLCLQLCASV 375
+ G PGTGKTQ L + A++
Sbjct: 140 IEGPPGTGKTQTILNIIANL 159
>UniRef50_Q4JXK0 Cluster: DNA repair protein RadA; n=1;
Corynebacterium jeikeium K411|Rep: DNA repair protein
RadA - Corynebacterium jeikeium (strain K411)
Length = 454
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 247 PTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
PT LD +L GG+ GS L G PG GK+ L L++ A+
Sbjct: 71 PTGIGELDRVLG-GGIVPGSAVLLAGEPGVGKSTLLLEVAAA 111
>UniRef50_Q0S2T4 Cluster: Probable ATP-dependent DNA helicase; n=1;
Rhodococcus sp. RHA1|Rep: Probable ATP-dependent DNA
helicase - Rhodococcus sp. (strain RHA1)
Length = 1098
Score = 33.1 bits (72), Expect = 9.8
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 313 ELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLL 483
++LG PGTGKT L + V + ++ G + E++ + T + R +E +TA+L+
Sbjct: 51 QVLGGPGTGKTSLLV----DVAVDRIAGGEDPESVLVLTQSKRAAGRVREEVTAALI 103
>UniRef50_A4ZRA5 Cluster: Primase/helicase; n=2; unclassified
Podoviridae|Rep: Primase/helicase - Cyanophage Syn5
Length = 534
Score = 33.1 bits (72), Expect = 9.8
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Frame = +1
Query: 286 GGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNTNFTPTRFKEI 465
GG++LG L + GTGK+ LC ++ S+ + G + + ++ + T R +
Sbjct: 278 GGLRLGELVTITAGSGTGKSTLCGEIAVSL----ISQGESVGYIALEESVKRTGLRLMTV 333
Query: 466 LTASLL----KCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAEHPRVKL 633
L K + + F++ R++ + FG +N + +L + VK
Sbjct: 334 EANKPLHLDNKINETDFKRAFDQTLGSGRVYLRDGFGSVDPDQLLNDVR-YLVKTNEVKW 392
Query: 634 IVIDSITFPFKEGISVQKRTGLLFRQMADLQRIAMEGLIAVVLVNEM 774
IV+D ++ S +R ++ M L+ E I ++L++ +
Sbjct: 393 IVLDHLSILLSGNESNDERK-MIDITMTKLRSFVEETGIGMILISHL 438
>UniRef50_A5K180 Cluster: ATP-dependent protease, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent protease, putative -
Plasmodium vivax
Length = 1017
Score = 33.1 bits (72), Expect = 9.8
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 277 LANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLN 405
+ N V+ LT L+G PG GKT +C + +++Q+P + +N
Sbjct: 461 ILNKNVKPKILT-LVGYPGIGKTSICKSISSALQLPHCIINMN 502
>UniRef50_Q6C5D7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 297
Score = 33.1 bits (72), Expect = 9.8
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +1
Query: 256 SQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNT 435
++NL H L QL L L G P +GKT +LC G N L +D ++
Sbjct: 23 AENLLHWLHLPSAQLAGLITLTGAPRSGKTTALYELCRVCLPFDTPGGENKTVLVLDLDS 82
Query: 436 NFT 444
++T
Sbjct: 83 SWT 85
>UniRef50_A7TGZ2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 422
Score = 33.1 bits (72), Expect = 9.8
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 259 QNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDT-NT 435
+ LD L +G Q S+ E+ G PG GKT+L LQ+ ++ K S + + L+I+T NT
Sbjct: 23 EELDECLEDG-FQSRSIYEIYGPPGIGKTRLGLQVMSNFVNDK--SRADEKVLWIETYNT 79
Query: 436 -NFTPTRFKEIL 468
T F ++L
Sbjct: 80 LPVTENNFSDLL 91
>UniRef50_A6SNV0 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 978
Score = 33.1 bits (72), Expect = 9.8
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQN---LDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCAS 372
T+T W K+ CL I T LDH+ +G V+ G+LT L+G G GKT L L + AS
Sbjct: 831 TSTFQW-KDICL-DIKTRDGTRRILDHV--DGWVKPGTLTALMGPTGAGKTSL-LDVLAS 885
Query: 373 VQIPKVLSG 399
V+SG
Sbjct: 886 RSNVGVVSG 894
>UniRef50_Q682D3 Cluster: DNA-repair protein XRCC2 homolog; n=4;
core eudicotyledons|Rep: DNA-repair protein XRCC2
homolog - Arabidopsis thaliana (Mouse-ear cress)
Length = 372
Score = 33.1 bits (72), Expect = 9.8
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +1
Query: 292 VQLGSLTELLGLPGTGKTQLCLQLCASVQIPKV-----LSGLNAEALYIDTNTNFTPTRF 456
++ G++ E+ G + KTQ+ +Q S +PK GL L++D + F R
Sbjct: 40 LRAGNVVEITGASTSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRL 99
Query: 457 KEILTASLLK 486
++L LL+
Sbjct: 100 SQMLKHRLLQ 109
>UniRef50_Q04761 Cluster: Protein recA; n=310; Bacteria|Rep: Protein
recA - Brucella abortus
Length = 361
Score = 33.1 bits (72), Expect = 9.8
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQ 378
+ ++ T S +LD L GG+ G + E+ G +GKT L L A Q
Sbjct: 48 IETVSTGSLSLDIALGVGGLPKGRIVEIYGPESSGKTTLALHTIAEAQ 95
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 868,126,581
Number of Sequences: 1657284
Number of extensions: 17659676
Number of successful extensions: 49615
Number of sequences better than 10.0: 217
Number of HSP's better than 10.0 without gapping: 47118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49531
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80342087756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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