Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP15_F_F04
(891 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC644.14c |rhp51|rad51|recombinase Rhp51|Schizosaccharomyces p... 90 4e-19
SPAC8E11.03c |dmc1|dmp1|RecA family ATPase Dmc1|Schizosaccharomy... 74 3e-14
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces... 67 3e-12
SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces... 43 7e-05
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 32 0.095
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 29 1.2
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 27 3.6
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 27 3.6
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 27 4.7
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 27 4.7
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 26 6.3
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 26 6.3
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 26 6.3
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 26 6.3
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 26 6.3
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 8.3
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 8.3
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 8.3
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 8.3
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 8.3
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 8.3
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 8.3
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 8.3
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 8.3
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 8.3
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 8.3
>SPAC644.14c |rhp51|rad51|recombinase Rhp51|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 89.8 bits (213), Expect = 4e-19
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TATE + + L +I T S+ LD +L GGV+ GS+TEL G TGK+Q+C L + Q+
Sbjct: 110 TATEYHIRRSELITITTGSKQLDTLL-QGGVETGSITELFGEFRTGKSQICHTLAVTCQL 168
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P + G + LYIDT F P R LL + Y N EE LD + Y A+
Sbjct: 169 PIDMGGGEGKCLYIDTEGTFRPVR--------LL---AVADRYGLNGEEVLDNVAYARAY 217
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
+ + + + ++E R L+V+DS T ++ S + R L R M LQR
Sbjct: 218 NADHQLELLQQAANMMSE-SRFSLLVVDSCTALYRTDFSGRGELSARQMHLARFMRTLQR 276
Query: 730 IAMEGLIAVVLVNEM 774
+A E IAVV+ N++
Sbjct: 277 LADEFGIAVVITNQV 291
>SPAC8E11.03c |dmc1|dmp1|RecA family ATPase Dmc1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 332
Score = 73.7 bits (173), Expect = 3e-14
Identities = 55/195 (28%), Positives = 95/195 (48%), Gaps = 4/195 (2%)
Frame = +1
Query: 202 TATELWQKETCLPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQI 381
TA E+ Q + SI T S+ L+ IL GG+Q S+TE+ G GKTQ+ LC + Q+
Sbjct: 81 TAMEISQNRKKVWSISTGSEALNGILG-GGIQSMSITEVFGEFRCGKTQMSHTLCVTAQL 139
Query: 382 PKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAF 561
P+ + G + +IDT F P R K I + + ++A++ + A+
Sbjct: 140 PRDMGGAEGKVAFIDTEGTFRPDRIK-----------AIAERFGVDADQAMENIIVSRAY 188
Query: 562 GIEKFCACMNRISVFLAEHPRVKLIVIDSITFPFKEGIS----VQKRTGLLFRQMADLQR 729
E+ + ++ AE + +L+++DSI F+ S + +R L +A L
Sbjct: 189 NSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLARLNH 248
Query: 730 IAMEGLIAVVLVNEM 774
I+ E +AV + N++
Sbjct: 249 ISEEFNVAVFVTNQV 263
>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 67.3 bits (157), Expect = 3e-12
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 13/193 (6%)
Frame = +1
Query: 244 IPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYI 423
+ T LD L +GG+ +G LTE+ G G+GK+Q C+QLC VQ+P L G+N A++I
Sbjct: 75 LTTGDVKLDETL-HGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVFI 133
Query: 424 DTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISV 603
T + R E+ + K + + + DR++ I +E +
Sbjct: 134 STESGLETKRLFELARYLPERYPKADKKDIIIKNPG-DRVYTILCPDLESQEHIIQYQLP 192
Query: 604 FLAEHPRVKLIVIDSITFPFKEGI-------------SVQKRTGLLFRQMADLQRIAMEG 744
L ++ L+++DS+ ++ + ++ KR L + L+ +A +
Sbjct: 193 ILFNRDKIGLVILDSVASNYRAELRYNRSKSHFRDLDNIAKRGNQLGKLAMTLRTLAHQH 252
Query: 745 LIAVVLVNEMSTR 783
AVV+ N++S R
Sbjct: 253 EAAVVIANQVSDR 265
>SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 350
Score = 42.7 bits (96), Expect = 7e-05
Identities = 34/138 (24%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 256 SQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIPKVLSGLNAEALYIDTNT 435
S+ LD G++ G ++E+ G PG GKT L LQ+ A+ +LSG + ++++T
Sbjct: 29 SKLLDDAFGGSGLKRGYISEVCGAPGMGKTSLALQITANA----LLSG--SRVIWVETCQ 82
Query: 436 NFTPTRFKEILTASLLKCQKIEPSYLFNEEEALDRLHYINAFGIEKFCACMNRISVFLAE 615
R +++L + Q E + +E L+ L + A + A + +
Sbjct: 83 PIPMERLRQLLDNHVPSSQDEEEK--CDTDELLNLLDVVYAPNLVNILAFLRNFD--QEK 138
Query: 616 H-PRVKLIVIDSITFPFK 666
H + L++ID+++ P +
Sbjct: 139 HLKEIGLLIIDNLSMPIQ 156
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 32.3 bits (70), Expect = 0.095
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +1
Query: 235 LPSIPTFSQNLDHILANGGVQLGSLTELLGLPGTGKTQLCLQLCASVQIP-KVLSGLNAE 411
L I F ++ H GG +L L G PGTGKT L + +P +SG +
Sbjct: 279 LEEIVDFLRDPTHFTRLGG-KLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFD 337
Query: 412 ALYIDTNTNFTPTRFKEILTASLLKCQKIEPSYLFNEE 525
+Y+ R +E+ A+ +K PS +F +E
Sbjct: 338 EMYVGVGAK----RVRELFAAA----RKQAPSIIFIDE 367
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 368 AQSCKHNCVFPVPGRPSNSVSEPNCTPPFAR 276
A K + VFP+PG P +V++P FAR
Sbjct: 147 ADQAKMSGVFPLPGAPRAAVTDPEKLLEFAR 177
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -2
Query: 857 STRXLQRWXQASPNEPTTAPPDKPNLVLISFTSTTAIXPSMAILCKS--AI*RNNSPV 690
STR SP T+ +P T++T+I PS+A KS A R N+P+
Sbjct: 155 STRSSSHIQSLSPESKQTSDGHRPPSPTSITTTSTSIDPSVAFSSKSTLATTRTNAPL 212
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +3
Query: 177 EYE*L*NPYCNGIVAERNLFTLHSNI*SELRSYSSEWWSAIRLTHRVTWSSWYRKNTVVF 356
EY+ L N Y +G+V +++ T SNI E Y ++ + HR + + V
Sbjct: 167 EYKRLRNEY-SGVVTGKHMLTGGSNIRPEATGYGVVYYVKHMIEHRTKGAETLKGKRV-- 223
Query: 357 TALCFSTNTKSFKRIEC 407
A+ S N + ++C
Sbjct: 224 -AISGSGNVAQYAALKC 239
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 26.6 bits (56), Expect = 4.7
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = +1
Query: 373 VQIPKVLSGLNAEALYIDTNTNFTPTRFKEILTASLLKCQKIEPSY-LFNEEEALDRLHY 549
+ P +LS +E YI + TP + +T + PS+ L N E +
Sbjct: 429 INYPYLLSLGTSE--YIVALPDSTPYGMQHNVTIHNVSTIGKHPSFPLSNNGELIGEFTL 486
Query: 550 INAFGIEKFCACMNRISVFLAEHPRVKLIVI 642
N +EK CAC N+ R K I++
Sbjct: 487 SNITDVEKVCACSNKNIQISFSSDRTKGILV 517
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 26.6 bits (56), Expect = 4.7
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = -3
Query: 280 LEYDLSSD*MLEWRVNRFLSATIPLQYGFYNYSYSDK 170
+++ + D W++N+ + T+ Y FY + Y ++
Sbjct: 540 VDHQILQDRSKYWKINQAMLVTLQRLYNFYRFQYLEE 576
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 316 LLGLPGTGKTQLCLQLCASVQIPKVLSG 399
+ G PGTGKT L Q+ + ++ + G
Sbjct: 13 ICGTPGTGKTTLAEQVAETTELENICIG 40
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -2
Query: 395 LKTFGICTEAQSCKHNCVFPVPG 327
LK F IC +Q C +N F G
Sbjct: 1083 LKAFSICAASQGCMNNLTFGYDG 1105
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = -3
Query: 376 VLKHRAVNTTVFFLYQEDQVTL*VSLIALHHSLEYDLSSD*MLEWRVNRFLSATIPLQYG 197
+L H+ +++ FF + + L++LH+ D+ + W+V FLS+
Sbjct: 565 LLTHKCLSSLSFFGLHVPFASAPILLLSLHYENSQDIQAVVTKLWQVLEFLSSRCEFARE 624
Query: 196 FYNY 185
NY
Sbjct: 625 SLNY 628
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2
Query: 719 SAI*RNNSPVLFCTDIPSLNGNVIESITINLTLGCSARKTEILFIH 582
S + RN +P + +P GN+ E +TI TL A++ +F+H
Sbjct: 185 SVLGRNKAP----SSLPFALGNLSEKVTIFFTLRYFAKQPFSIFLH 226
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -2
Query: 167 YIFL*ALSIFLCQIYIFKPLSTIIPTL 87
Y+ L ++SIFL Q +F PLS I +L
Sbjct: 415 YLILNSISIFLLQHPLFAPLSHAIESL 441
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 509 ICSMKKKHWTDYITLMHLGLRNFVHV*TEFQFF 607
+CS W D+I+L+ N +H T+ F
Sbjct: 1099 VCSTHPNTWVDHISLVQQSYNNAIHSATQMTPF 1131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,715,387
Number of Sequences: 5004
Number of extensions: 78891
Number of successful extensions: 228
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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